UniProtKB AC (Name) | UniProtKB Section | Organism | Description | |
---|---|---|---|---|
P40901 (ISP5_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Sexual differentiation process putative amino-acid permease isp5; | |
O59698 (YN41_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Uncharacterized transporter C36.01c; | |
O13902 (DAK1_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Dihydroxyacetone kinase 1; Glycerone kinase 1; Triokinase 1; Triose kinase 1; | |
O74407 (SYDC_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Aspartate--tRNA ligase, cytoplasmic; Aspartyl-tRNA synthetase; | |
O94547 (SRK1_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Serine/threonine-protein kinase srk1; Sty1-regulated kinase 1; | |
G2TRM1 (YI7I_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | UPF0768 protein C977.18; | |
C6Y4C2 (SPO2_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Sporulation-specific protein 2; | |
Q9UUI9 (YIY3_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Uncharacterized protein C22F8.03c; | |
O74469 (YQC7_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Exosome complex protein C1739.07; | |
P87054 (MUG15_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Meiotically up-regulated gene 15 protein; | |
O94504 (TRX2_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Thioredoxin-2, mitochondrial; | |
Q09190 (CDD_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Putative cytidine deaminase; Cytidine aminohydrolase; | |
O94586 (HNT1_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Adenosine 5'-monophosphoramidase hnt1; Histidine triad nucleotide-binding protein HNT1; Hit family protein 1; | |
O74485 (CUE3_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | CUE domain-containing protein 3; | |
Q10279 (FUR4_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Uracil permease; | |
Q10238 (MPF1_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Meiotic PUF family protein 1; | |
Q9P5N4 (YH81_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Uncharacterized amino-acid permease C359.01; | |
Q09840 (AMY2_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Alpha-amylase 2; 1,4-alpha-D-glucan glucanohydrolase; | |
O59852 (INV1_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Invertase; Beta-fructofuranosidase; Saccharase; | |
P30290 (MIK1_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Mitosis inhibitor protein kinase mik1; | |
O94343 (YHMA_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Uncharacterized MFS-type transporter C1271.10c; | |
Q9US48 (GAA1_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | GPI transamidase component gaa1; | |
Q10076 (HSR1_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Hydrogen peroxide stress regulator 1; | |
O60174 (SFC6_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Transcription factor tau subunit sfc6; TFIIIC subunit sfc6; Transcription factor C subunit 6; | |
O59726 (FNX2_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Vacuolar membrane amino acid uptake transporter fnx2; | |
Q9C1W8 (PPN1_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Endopolyphosphatase; | |
P41411 (CDC18_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Cell division control protein 18; | |
Q9UT49 (CID13_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Poly(A) RNA polymerase cid13; Caffeine-induced death protein 13; Polynucleotide adenylyltransferase cid13; | |
O14158 (YE76_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | AB hydrolase superfamily protein C4A8.06c; | |
Q9Y7N0 (BDF1_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | SWR1 complex bromodomain subunit bdf1; | |
Q10202 (DBP3_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | ATP-dependent RNA helicase dbp3; | |
Q9US10 (YK68_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Uncharacterized membrane protein C6F6.13c; | |
Q9P5N2 (AAT1_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Amino acid transporter 1; | |
Q9P6J3 (MALT_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Alpha-glucosidase; Maltase; | |
Q10324 (YD6C_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Uncharacterized protein C17G8.12; | |
Q96WU9 (YJO6_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Uncharacterized protein PB16A4.06c; | |
Q09723 (TR112_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Multifunctional methyltransferase subunit trm112; eRF1 methyltransferase subunit trm112; tRNA methyltransferase 112 homolog; | |
O60127 (PTF2_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Pdp3-interacting factor 2; | |
Q9UR06 (MMF2_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Protein mmf2, mitochondrial; Maintenance of mitochondrial function 2; | |
Q7Z9I1 (PFL4_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Putative cell agglutination protein pfl4; Adhesin pfl4; Pombe flocculin 4; | |
Q02953 (HSF_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Heat shock factor protein; Heat shock transcription factor; | |
Q92372 (RFA1_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Replication factor A protein 1; Single-stranded DNA-binding protein p68 subunit; | |
Q9UT57 (CFD1_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Probable cytosolic Fe-S cluster assembly factor SPAC806.02c; | |
P87231 (MUS81_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Crossover junction endonuclease mus81; | |
O13821 (VPS27_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Vacuolar protein sorting-associated protein 27; Suppressor of ste12 deletion protein 4; | |
Q92338 (ABCI_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Protein ABC1 homolog, mitochondrial; | |
Q9UT83 (MUG28_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Meiotically up-regulated gene 28 protein; | |
O74314 (MET7_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Probable cystathionine gamma-synthase; O-succinylhomoserine (thiol)-lyase; | |
O14194 (GGT2_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Glutathione hydrolase proenzyme 2; Gamma-glutamyltransferase 2; Gamma-glutamyltranspeptidase 2; Glutathione hydrolase 2 heavy chain; Glutathione hydrolase 2 light chain; | |
O14127 (YF51_SCHPO) | Swiss-Prot | Schizosaccharomyces pombe (strain 972 / ATCC 24843) | Uncharacterized protein C3C7.01c; |
Schizosaccharomyces pombe, also called "fission yeast", is a species of yeast used in traditional brewing and as a model organism in molecular and cell biology. It is a unicellular eukaryote, whose cells are rod-shaped. Cells typically measure 3 to 4 micrometres in diameter and 7 to 14 micrometres in length. Its genome, which is approximately 14.1 million base pairs, is estimated to contain 4,970 protein-coding genes and at least 450 non-coding RNAs.
"Schizosaccharomyces pombe", Wikipedia: The Free Encyclopedia
From left to right: i) The number of proteins in the reference proteome of Schizosaccharomyces pombe, ii) the number of unique protein sequences for which at least one model is available, iii) the total number of models and iv) a coverage bar plot is shown.
The bar plot shows the coverage for every protein in the reference proteome of Schizosaccharomyces pombe for which there is at least one model. Different colours (dark green to red boxes) represent the coverage of the targets. Targets with high coverage are represented in dark green (more than 80% of the target's length is covered by models), whereas low coverage is shown in red. The size of each box is proportional to the number of target sequences with a given coverage.
For information on the latest proteome for Schizosaccharomyces pombe, please visit UniProtKB, or from PomBase.
You can easily download the latest protein sequences for Schizosaccharomyces pombe proteome here. Please note this download is for the current UniProtKB release, which may be different to release 2024_02 that was used for the most up to date SWISS-MODEL Repository.
Proteins in proteome | Sequences modelled | Models |
5,117 | 4,192 | 7,886 |
Detailed coverage numbers are obtained by hovering the mouse over one of the boxes.
The plot shows the evolution over years (x-axis) of the fraction of Schizosaccharomyces pombe reference proteome residues (y-axis) for which structural information is available. Different colors (light blue to dark blue) in the plot represent the quality of the sequence alignment between the reference proteome sequences (targets) and the sequences of the proteins in the structure database (templates). Alignments with low sequence identity are displayed in light blue, whereas alignments with high sequence identity are depicted in dark blue. The SWISS-MODEL Template Library is used as database of templates. Only target-template alignments found by HHblits and only residues with atom coordinates are considered.
This chart shows the percentage of residues in the Schizosaccharomyces pombe proteome which are covered by experimental structures and the enhancement of coverage by homology modelling by the SWISS-MODEL pipeline. Experimental residue coverage is determined using SIFTS mapping. For residues which are not covered by experimental structures (including where there are no atom records in SIFTS mapping) the model coverage bars are coloured by QMEANDisCo local quality score.
Many proteins form oligomeric structures either by self-assembly (homo-oligomeric) or by assembly with other proteins (hetero-oligomeric) to accomplish their function. In SWISS-MODEL Repository, the quaternary structure annotation of the template is used to model the target sequence in its oligomeric form. Currently our method is limited to the modelling of homo-oligomeric assemblies. The oligomeric state of the template is only considered if the interface is conserved.
Single Chain | 2-mer | 3-mer | 4-mer | 5-mer | 6-mer | 7-mer | 8-mer | 9-mer | 10-mer | 11-mer | 12-mer | 14-mer | 16-mer | 18-mer | 24-mer | 26-mer | 36-mer | 40-mer | 60-mer |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
6,770 | 781 | 54 | 162 | 6 | 57 | 6 | 12 | 1 | 6 | 3 | 10 | 2 | 3 | 1 | 5 | 1 | 2 | 2 | 2 |