Chain information help
Chain information help Suppose that you want to submit a
protein that contains two chains, named A and B. Then you have four
possibilities to obtain an energy profile:
1.- If you fill
the chain information box with the
sequence of characters AB,
the profile calculation will be performed on chain A, but
considering all the atom contacts with the chain B.
2.- If you fill the chain information box with
the sequence of characters BA,
the profile calculation will be performed on chain B,
but considering all the atom contacts with the chain A.
3.- If you fill the chain information
box with the sequence of characters
A,
the profile calculation will
be performed only on chain A, without
considering the atoms of
chain B, even if you submit the atom coordinates of this chain.
4.- If you fill the chain
information box with the sequence of characters
B,
the profile calculation will
be performed only on chain B, without considering the atoms of
chain A, even if you submit the atom coordinates
Of this chain.
If you are submitting a unique protein chain with identifier, you must write the chain identifier in the chain information box.
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