Welcome to the SWISS-MODEL Repository

The SWISS-MODEL Repository is a database of annotated three-dimensional comparative protein structure models generated by the fully automated homology-modelling pipeline SWISS-MODEL.

Example Queries:
[P23298]  [GLDA_ECOLI]  [IPI00743503]  [NP_416402]  [GI:28872740]  [ENTREZ:54401]  [Sequence]

List of model organisms regularly updated in Repository

The proteomes of the following organisms are regularly updated in SWISS-MODEL Repository. A reference proteome is the complete proteome of a representative, well-studied model organism or an organism of interest for biomedical research. Reference proteomes are retrieved from the UniProt database.

Organism Taxonomy Number of models
Human Homo Sapiens 85562
Mouse Mus musculus 76188
Caenorhabditis elegans C. elegans 35917
Escherichia coli (strain K12) E.coli K12 5606
Mouse-ear cress A. thaliana 54365
Fruit Fly D. melanogaster 36631
Bakers Yeast S. cerevisiae 8924
Caulobacter crescentus C. crescentus 5169
Mycobacterium tuberculosis M. tuberculosis 5469
Pseudomonas aeruginosa P. aeruginosa 7916
Staphylococcus aureus S. aureus 3257
Plasmodium falciparum P. falciparum 6535

Statistics based on UniProt release 2015_08

The current release of the SWISS-MODEL Repository consists of 3079865 model entries for 2246353 unique sequences in the UniProt database (2015_08). In the last update cycle (2015-07-24) 106038 unique sequences were considered for revision. See the [release notes] of the last updates.

NOTE: The SWISS-MODEL repository contains theoretically calculated models, which may contain significant errors.

SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.