Welcome to the SWISS-MODEL Repository

The SWISS-MODEL Repository is a database of annotated three-dimensional comparative protein structure models generated by the fully automated homology-modelling pipeline SWISS-MODEL.

Example Queries:
[P23298]  [GLDA_ECOLI]  [IPI00743503]  [NP_416402]  [GI:28872740]  [ENTREZ:54401]  [Sequence]

List of model organisms regularly updated in Repository

The proteomes of the following organisms are regularly updated in SWISS-MODEL Repository. A reference proteome is the complete proteome of a representative, well-studied model organism or an organism of interest for biomedical research. Reference proteomes are retrieved from the UniProt database.

Organism Taxonomy Number of models
Human Homo Sapiens 82481
Mouse Mus musculus 74190
Caenorhabditis elegans C. elegans 35014
Escherichia coli (strain K12) E.coli K12 5585
Mouse-ear cress A. thaliana 53308
Fruit Fly D. melanogaster 35774
Bakers Yeast S. cerevisiae 8633
Caulobacter crescentus C. crescentus 4974
Mycobacterium tuberculosis M. tuberculosis 5436
Pseudomonas aeruginosa P. aeruginosa 7758
Staphylococcus aureus S. aureus 3205
Plasmodium falciparum P. falciparum 6175

Statistics based on UniProt release 2015_07

The current release of the SWISS-MODEL Repository consists of 3075010 model entries for 2248469 unique sequences in the UniProt database (2015_07). In the last update cycle (2015-06-25) 103572 unique sequences were considered for revision. See the [release notes] of the last updates.

NOTE: The SWISS-MODEL repository contains theoretically calculated models, which may contain significant errors.

SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.