SWISS-MODEL Repository
Uniprot features:
SWISS-MODEL Repository - Model Details
Model Overview
Sequence
| UniProt | A9KGR9 |
Database: TrEMBL (Unreviewed)  |
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| A9NB33 |
Database: TrEMBL (Unreviewed) |
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| Q83EL9 |
Database: TrEMBL (Unreviewed) |
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| A9ZJT6 |
Database: TrEMBL (Unreviewed) |
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| I7MNG3 |
Database: TrEMBL (Unreviewed) |
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| STRING |
A9KGR9: 360115.COXBURSA3 |
A9NB33: 360115.COXBURSA3 |
A9ZJT6: 360115.COXBURSA3 |
Domain
Model 3D Structure
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Template Links:
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
display model: in [ AstexViewer ] download model: as [ pdb ] - as [ Deepview project ] 
This model has not been updated since 2008-08-31. In the meantime, new template
structures may have become available which would allow building a more reliable model.
Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now?
[ Submit ]
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Alignment
TARGET 2 RPSKRA ANELRPLSFT TQFTRYAEGS VLVTLGNTKV ICNASIVEGV
1r6lA 2 xn--rpsgra adqlrpirit rhytkhaegs vlvefgdtkv ictvsaesgv
TARGET sssss ss ss ssssss sss sssssssss
1r6lA sssss ss ss ssssss sss sssssssss
TARGET 48 PRFLKNSEQG WLTAEYGMLP RSTHSRMDRE ASRGKQGGRT VEIQRLIGRS
1r6lA 49 prflk---qg wltaeygxlp rstgernqre asrgkqggrt leiqrligrs
TARGET sssssssss h hhh hhh hhhhhhhhhh
1r6lA sssssssss h hhh hhh hhhhhhhhhh
TARGET 98 LRAALDLKLL GPYTITIDCD VIQADGGTRT AAINGSCIAM IEALRHLQRK
1r6lA 99 lraaldlskl gentlyidcd viqadggtrt asitgatval idalavlkkr
TARGET hhhsss hh sssssssss ss hhh hhhhhhhhhh hhhhhhhhhh
1r6lA hhhsss hh sssssssss ss hhh hhhhhhhhhh hhhhhhhhhh
TARGET 148 GILQTDPLKH KVAAVSVGIY KGVPVLDLDY AEDSNAHTDM NVVMTDNDAF
1r6lA 149 galkgnplkq xvaavsvgiy qgvpvldldy ledsaaetdl nvvxtdaggf
TARGET sss ssssssssss sssss h hhhhh ssss ssssss ss
1r6lA sss ssssssss sssss h hhhhh ssss sssss ss
TARGET 198 IEIQGTAEGD AFHAKELDAL INLARHGIKQ IIEKQQEALS
1r6lA 199 ievqgtaega pfrpaelnax lelaqqgxqe lfelqraala e
TARGET ssssssss hhhhhhh hhhhhhhhhh hhhhhhhhhh
1r6lA ssssssss hhhhhhh hhhhhhhhhh hhhhhhhhhh
no data available!
no data available!
Template Selection
START PIPELINE ON ID: d050eee9a30736459ce3cac9de71e2a2 on BC2-cluster at Sun Aug 31 17:56:46 2008 BLAST_TEMPLATE SELECTION SUCCESSFUL TEMPLATES FOUND: 1 GO TO MODELING STEP ############# TEMPLATES SELECTED ############# >d050eee9a30736459ce3cac9de71e2a2 ******************************************************************************* >1r6lA Evalue:3.74079e-82 SeqID:66.102 Method:BLAST Type:MODEL *****************-************************************************************* TEMPLATE ID START STOP METHOD STATUS 1r6lA 2 237 BLAST BUILT FINISHED PIPELINE ON ID: d050eee9a30736459ce3cac9de71e2a2 on gopt-16.cluster.bc2.ch BC2-Cluster at Sun Aug 31 17:59:16 2008
Template Search
| Template Description |
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Downloads
Reference
If you are using models from the SWISS-MODEL Repository, please cite the following articles:
- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.
- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.