SWISS-MODEL Repository - Model Details

Model Overview
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1
620

Sequence
UniProt A0JMK5
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

STRING
A0JMK5: 7955.ENSDARP0000

Domain
Link to: [ InterPro ]
Y_phosphatase
GRAM
Myotub-related
Y_phosphatase_m

Model 3D Structure
Model information:
Modelled residue range: 52 to 562
Based on template: [ 1zvr ]  
Sequence Identity [%]: 78%
Model date: 2008-08-28
Revision date: 2008-08-28

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-08-28. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    52        ELPLLP VELVQESAKD VTYICPFIGP IRGSLTVTNY RLFFRCTDRE
1zvrA     73    me--eppllp genikdmakd vtyicpftga vrgtltvtny rlyfksmerd
                                                                      
TARGET                       ssssss   sssss   ss ssssssssss ssssss    
1zvrA                        ssssss   sssss   ss ssssssssss ssssss    


TARGET    98    PVFGLDLPLG VLSRVEKIGA ATGRGDVSYG LA--CKDMRN LRFVHKEPDD
1zvrA     121   ppfvldaslg vinrvekigg assrgensyg letvckdirn lrfahk-peg
                                                                      
TARGET            sssssss     sssss           ss ss  ss     sssss     
1zvrA             sssssss  ssssssss           ss ssssss  ss sssss     


TARGET    146   SLKKSVFEVL MKFAFPVSNN MSLFAFEYKQ VFPENGWKVY DPLAECKRQG
1zvrA     170   rtrrsifenl mkyafpvsnn lplfafeyke vfpengwkly dplleyrrqg
                                                                      
TARGET            hhhhhhhh hhhh           hhh          hh    hhhhhhhh 
1zvrA             hhhhhhhh hhh                         hh    hhhhhhhh 


TARGET    196   LPNESWRISK LNDHYELCDS YPATLVVPVT ITDDELRRVS SFRAKGRIPV
1zvrA     220   ipneswritk ineryelcdt ypallvvpan ipdeelkrva sfrsrgripv
                                                                      
TARGET              sssss                 sssss    hhhhhhhh hsss     s
1zvrA               sssss                 sssss    hhhhhhhh hsss     s


TARGET    246   LSWIHPESQA AVVRSSQPMV GQNGRRCKED EKLLQAIMDA NAQSHKLFIF
1zvrA     270   lswihpesqa titrcsqpmv gvsgkrsked ekylqaimds naqshkifif
                                                                      
TARGET          sssss    s sssss sss         hhh hhhhhhhhh        ssss
1zvrA           sssss    s sssss sss         hhh hhhhhhhhh        ssss


TARGET    296   DARPSVNAAA NKMKGGGFES EDAYQNAELV FLDIHNIHVM RESLRKLKEV
1zvrA     320   darpsvnava nkakgggyes edayqnaelv fldihnihvm reslrklkei
                                                                      
TARGET          ss  hhhhhh hhhh            sssss ss    hhhh hhhhhhhhhh
1zvrA           ss  hhhhhh hhhh            sssss ss    hhhh hhhhhhhhhh


TARGET    346   VYPNIEESHW LSNLESTHWL EHIKLILAGA LRIADKVESG KTSVVVHCSD
1zvrA     370   vypnieethw lsnlesthwl ehiklilaga lriadkvesg ktsvvvhssd
                                                                      
TARGET          h        h hhhhhh   h hhhhhhhhhh hhhhhhhhhh   sssss   
1zvrA           h        h hhhhhh   h hhhhhhhhhh hhhhhhhhhh   sssss   


TARGET    396   GWDRTAQLTS LALIMLDSHY RTIRGFQILV EKEWLSFGHR FQQRVGHGDK
1zvrA     420   gwdrtaqlts lamlmldgyy rtirgfevlv ekewlsfghr fqlrvghgdk
                                                                      
TARGET             hhhhhhh hhhhh   hh    hhhhhhh hhhhhh     hhhhh     
1zvrA              hhhhhhh hhhhh   h    hhhhhhhh hhhhhh     hhhhh     


TARGET    446   NHTDVDRSPI FLQFIDCVWQ MTRQFPAAFE FNEYFLITIL DHLYSCLFGT
1zvrA     470   nhadadrspv flqfidcvwq mtrqfptafe fneyflitil dhlysclfgt
                                                                      
TARGET                   h hhhhhhhhhh hhhh     s ss hhhhhhh hhhh      
1zvrA                    h hhhhhhhhhh hhhh     s ss hhhhhhh hhhh      


TARGET    496   FLCNSEQQRL KEEIPKRTVS LWSFVNSQLE EFVNPLYVHY SSHVLFPTVG
1zvrA     520   flcnseqqrg kenlpkrtvs lwsyinsqle dftnplygsy snhvlypvas
                                                                      
TARGET               hhhhh h   hhh     hhhh       sss                 
1zvrA                hhhhh h   hhh     hhhh       sss                 


TARGET    546   IRHLQLWVSY YIRWNPR                                    
1zvrA     570   mrhlelwvgy yirwnpr-                                   
                                                                      
TARGET                 hhh h                                          
1zvrA                  hhh h

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: 14c77aa5bb7d3c39f14b63a9a351d01c on BC2-cluster at Thu Aug 28 19:37:29 2008 
BLAST_TEMPLATE SELECTION SUCCESSFUL TEMPLATES FOUND:  1 BUT STILL ROOM FOR IMPROVEMENT GO TO
HHSEARCH


############# TEMPLATES SELECTED #############

>14c77aa5bb7d3c39f14b63a9a351d01c
******************************************************************************
>1zvrA Evalue:0 SeqID:78.558 Method:BLAST Type:MODEL
------****************************************************************--------


TEMPLATE ID    START          STOP           METHOD         STATUS         
1zvrA          52             562            BLAST          BUILT          

FINISHED PIPELINE ON ID: 14c77aa5bb7d3c39f14b63a9a351d01c on gopt-23.cluster.bc2.ch BC2-Cluster at
Thu Aug 28 19:46:07 2008


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.