SWISS-MODEL Repository - Model Details

Model Overview
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1
614

Sequence
UniProt A0JN51
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
Ets
Elf-1_N

Model 3D Structure
Model information:
Modelled residue range: 202 to 312
Based on template: [ 2dao ]  
Sequence Identity [%]: 36%
Model date: 2008-08-30
Revision date: 2008-08-30

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-08-30. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    202       DGKGNT IYLWEFLLAL LQDKATCPKY IKWTQREKGI FKLVDSKAVS
2daoA     1     gs--sgssgc rllwdyvyql lsdsr-yenf irwedkeski frivdpngla
                                                                      
TARGET                       hhhhhhhh h                          hhhhh
2daoA                        hhhhhhhh h                          hhhhh


TARGET    248   RLWGKHKNKP DMNYETMGRA LRYYYQRGIL AKVEGQRLVY QFKDMPKDLI
2daoA     48    rlwgnhknrt nmtyekmsra lrhyyklnii rkepgqrllf rfmktpdeim
                                                                      
TARGET          hhhhhh        hhhhhhh hhhhhhh ss s          sss       
2daoA           hhhhhh        hhhhhhh hhhhhhh ss s          sss       


TARGET    298   YIDDEDPSCS IESSD ---- --                              
2daoA     98    sgrtdrl-eh lesqelsgps sg                              
                                                                      
TARGET                                                                
2daoA

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: e2aadbbbc5e62ab0a8112fec3df49ea8 on BC2-cluster at Sat Aug 30 03:16:33 2008 
NO HITS FOUND IN BLAST-SEARCH FOR SEQID-CUTOFF 60 GO TO HHSEARCH


############# TEMPLATES SELECTED #############

>e2aadbbbc5e62ab0a8112fec3df49ea8
*****************************************************************************
>2daoA Evalue:5.6E-45 SeqID:36.036 Method:HHSEARCH Type:MODEL
-------------------------**************--------------------------------------


TEMPLATE ID    START          STOP           METHOD         STATUS         
2daoA          202            312            HHSEARCH       BUILT          

FINISHED PIPELINE ON ID: e2aadbbbc5e62ab0a8112fec3df49ea8 on gopt-11.cluster.bc2.ch BC2-Cluster at
Sat Aug 30 03:23:45 2008


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.