SWISS-MODEL Repository - Model Details

Model Overview
Click on the bars to get more details about individual Models or experimental structures
1
473

Sequence
UniProt A0QPZ0
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
Acetyltransf_1
AIRS
AIRS_C

Model 3D Structure
Model information:
Modelled residue range: 30 to 171
Based on template: [ 1q2y ]  
Sequence Identity [%]: 21%
Model date: 2008-07-31
Revision date: 2008-07-31

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-07-31. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    30         RPAEN ADDLASYRRL RRDSFVVDQG MFSGSDHDDI DDDPRVVVLI
1q2yA     1     mka--viakn eeqlkdafyv reevfvkeqn vpaeeeidel enesehiv--
                                                                      
TARGET               sss   hhhhhhhhhh hhhhhhh                   ssssss
1q2yA            ss  sss   hhhhhhhhhh hhhhhhh             h hhh ssss  


TARGET    75    AAAADGSVLG GVRLAPVGGV DLGWWTGSRL VVDRSTRITG IGAALVRAAC
1q2yA     47    -vydgekpvg agrwrmkd-- --gygkleri cvlkshrsag vggiimkale
                                                                      
TARGET          s     ssss sssssss       sssss               hhhhhhhhh
1q2yA            sss  ssss sssssss       sssss               hhhhhhhhh


TARGET    125   AYAESAGVLR FEATVQRRYQ PMFTALGWDP LGDVEIA--A RPHVWMRRQ 
1q2yA     92    kaaadggasg filnaqtqav pfykkhgyrv lsekefldag iphlqmmkd-
                                                                      
TARGET          hhhhhh   s sssssss    hhhh    ss s           sssssss  
1q2yA           hhhhhh   s sssssss    hhhh    ss s    sss   ssssssss

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: b5563a575e227751194b3aa9d6c839f9 on BC2-cluster at Thu Jul 31 17:59:46 2008 
NO HITS FOUND IN BLAST-SEARCH FOR SEQID-CUTOFF 60 GO TO HHSEARCH


############# TEMPLATES SELECTED #############

>b5563a575e227751194b3aa9d6c839f9
*******************************************************************************
>2i6rA Evalue:1.6E-24 SeqID:17.563 Method:HHSEARCH Type:MODEL
-----------------------------------******************************************--
>1q2yA Evalue:1.4E-09 SeqID:21.528 Method:HHSEARCH Type:MODEL
-----**********-*************--------------------------------------------------


TEMPLATE ID    START          STOP           METHOD         STATUS         
2i6rA          213            461            HHSEARCH       NOT BUILT      
1q2yA          30             171            HHSEARCH       BUILT          

FINISHED PIPELINE ON ID: b5563a575e227751194b3aa9d6c839f9 on gopt-36.cluster.bc2.ch BC2-Cluster at
Thu Jul 31 18:05:06 2008


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.