SWISS-MODEL Repository - Model Details

Model Overview
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1
269

Sequence
UniProt A0T0L1
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
ThiG

Model 3D Structure
Model information:
Modelled residue range: 8 to 255
Based on template: [ 1tyg ]  
Sequence Identity [%]: 52%
Model date: 2008-09-01
Revision date: 2008-09-01

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-09-01. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    8        LKIGNKS FNSRLMLGTG KYRTTQSAIA SIEDSNCDIV TVAIRRLPVN
1tygA     103   m--ltiggks fqsrlllgtg kypsfdiqke avavsesdil tfavrrmn--
                                                                      
TARGET             sss  ss s  sssss       hhhhhh hhhh     s ss        
1tygA              sss  ss s  sssss       hhhhhh hhhh     s ss        


TARGET    55    LKND-NINFL NKLDWNKLWL LPNTAGSQTA EEAIRMAFLG HELACQVGQE
1tygA     149   ifeasqpnfl eqldlskytl lpntagasta eeavriarla kas------g
                                                                      
TARGET                  hh hh         sss      h hhhhhhhhhh h         
1tygA                   hh hh      ss sss      h hhhhhhhhhh hh        


TARGET    104   DNFFVKLEVI SDPKYLLPDP IGTLKAAEFL IRKGFTVLPY INADPMLALH
1tygA     193   lcdmikvevi gcsrsllpdp vetlkaseql leegfivlpy tsddvvlark
                                                                      
TARGET              sss ss s     sssh hhhhhhhhhh hhh  sssss s   hhhhhh
1tygA             sssss ss s     sssh hhhhhhhhhh hhh  sssss s   hhhhhh


TARGET    154   LEDLGCATVM PLASPIGSGQ GLNNLANIKI IIENASVPVI IDAGIGTPSE
1tygA     243   leelgvhaim pgaspigsgq gilnplnlsf iieqakvpvi vdagigspkd
                                                                      
TARGET          hhh     ss ss             hhhhhh hhhh     s ss      hh
1tygA           hhh     ss ss              hhhhh hhhh     s ss      hh


TARGET    204   ATQAMELGAD GVLLNTAVAQ SKNPSQMASA MRLGVQAGRL AYLAGRMEKK
1tygA     293   aayamelgad gvllntavsg addpvkmara mklaveagrl syeagriplk
                                                                      
TARGET          hhhhhh      sss hhhh     hhhhhhh hhhhhhhhhh           
1tygA           hhhhhh      sss hhhhh    hhhhhhh hhhhhhhhhh           


TARGET    254   YY                                                    
1tygA     343   qy-                                                   
                                                                      
TARGET                                                                
1tygA

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: 8ae8eebdcb867c62c89f02a8fa635b6e on BC2-cluster at Mon Sep  1 06:36:43 2008 
NO HITS FOUND IN BLAST-SEARCH FOR SEQID-CUTOFF 60 GO TO HHSEARCH


############# TEMPLATES SELECTED #############

>8ae8eebdcb867c62c89f02a8fa635b6e
******************************************************************************************
>1tygA Evalue:0 SeqID:52.610 Method:HHSEARCH Type:MODEL
--***************-**************--***************************************************-----


TEMPLATE ID    START          STOP           METHOD         STATUS         
1tygA          8              255            HHSEARCH       BUILT          

FINISHED PIPELINE ON ID: 8ae8eebdcb867c62c89f02a8fa635b6e on gopt-73.cluster.bc2.ch BC2-Cluster at
Mon Sep  1 06:38:57 2008


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.