SWISS-MODEL Repository - Model Details

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1
375

Sequence
UniProt A1C2U3
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
TGF_beta
TGFb_propeptide

Model 3D Structure
Model information:
Modelled residue range: 270 to 375
Based on template: [ 1kla ]  
Sequence Identity [%]: 35%
Model date: 2008-08-30
Revision date: 2008-08-30

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-08-30. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    270      LDCDE-- HSTESRCCRY PLTVD-FEAF GWDWIIAPKR YKANYCSGEC
1klaA     1     a--ldtnycf ssteknccvr qlyidfrkdl gwkwihepkg yhanfclgpc
                                                                      
TARGET                                                                
1klaA                hhh                 sss hh          ss s         


TARGET    314   EFVFLQKYPH T---HLVHQA NPRGSAGPCC TPTKMSPINM LYFNGKEQII
1klaA     49    pyiwsldtqy skvlalynqh npgasaapcc vpqaleplpi vyyvgr-kpk
                                                                      
TARGET                          hhhh             ssssssssss ssss   sss
1klaA                    h hhhhhhhhh             ssssssssss ssss   sss


TARGET    361   YGKIPAMVVD RCGCS                                      
1klaA     98    veqlsnmivr sckcs-                                     
                                                                      
TARGET          ssssss sss sss                                        
1klaA           ssssss sss sss

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: 1dc982b89ed61a24f33b1467530cc051 on BC2-cluster at Sat Aug 30 03:36:41 2008 
NO HITS FOUND IN BLAST-SEARCH FOR SEQID-CUTOFF 60 GO TO HHSEARCH


############# TEMPLATES SELECTED #############

>1dc982b89ed61a24f33b1467530cc051
***************************************************************************
>1klaA Evalue:3E-34 SeqID:35.714 Method:HHSEARCH Type:MODEL
------------------------------------------------------*********************


TEMPLATE ID    START          STOP           METHOD         STATUS         
1klaA          270            375            HHSEARCH       BUILT          

FINISHED PIPELINE ON ID: 1dc982b89ed61a24f33b1467530cc051 on gopt-66.cluster.bc2.ch BC2-Cluster at
Sat Aug 30 03:39:23 2008


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.