SWISS-MODEL Repository - Model Details

Model Overview
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1
173

Sequence
UniProt A2BNS6
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
TPR_1
TPR_11

Model 3D Structure
Model information:
Modelled residue range: 26 to 153
Based on template: [ 2dba ]  
Sequence Identity [%]: 21%
Model date: 2008-09-03
Revision date: 2008-09-03

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-09-03. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    26                          MPIAEKEKKA YIYYRDGLAA QNNGDYSEAL
2dbaA     1     gssgssgmtv sgpgtpep-- rpatpgassv eqlrkegnel fkcgdyggal
                                                                      
TARGET                                         h hhhhhhhhhh       hhhh
2dbaA                                          h hhhhhhhhhh       hhhh


TARGET    56    EYYKESLLLE ENKIDRGETL KNMAIIYMSN GEEDLSIETY EKALEENPKQ
2dbaA     49    aaytqalgld atpqdqavlh rnraachlkl edydkaetea skaiekdggd
                                                                      
TARGET          hhhhhhh      hhhhhhhh hhhhhhhhh    hhhhhhhh hhhhh     
2dbaA           hhhhhhh      hhhhhhhh hhhhhhhhh    hhhhhhhh hhhhh     


TARGET    106   PSCLKNIGLI YEKRGRYAEQ NGDLDQRDIW FDKAAEVWSK AVRLYPGG -
2dbaA     99    vkalyrrsqa leklgrl--- ---------- -dqavldlqr cvslepknkv
                                                                      
TARGET           hhhhhhhhh hhhh sssss        sss ss   hhhhh hhhh      
2dbaA            hhhhhhhhh hhhh                   hhhhhhhhh hhhh     h


TARGET          ---------- ----                                       
2dbaA     135   fqealrnisg pssg                                       
                                                                      
TARGET                                                                
2dbaA           hhhhhhhhh

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: 84d0f56b199b44518c6aa08aa43f1cdc on BC2-cluster at Wed Sep  3 14:39:10 2008 
NO HITS FOUND IN BLAST-SEARCH FOR SEQID-CUTOFF 60 GO TO HHSEARCH


############# TEMPLATES SELECTED #############

>84d0f56b199b44518c6aa08aa43f1cdc
***************************************************************************************
>2dbaA Evalue:3.7E-08 SeqID:21.094 Method:HHSEARCH Type:MODEL
------------*************************************************-------*********----------


TEMPLATE ID    START          STOP           METHOD         STATUS         
2dbaA          26             153            HHSEARCH       BUILT          

FINISHED PIPELINE ON ID: 84d0f56b199b44518c6aa08aa43f1cdc on gopt-70.cluster.bc2.ch BC2-Cluster at
Wed Sep  3 14:40:35 2008


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.