SWISS-MODEL Repository - Model Details

Model Overview
Click on the bars to get more details about individual Models or experimental structures
1
301

Sequence
UniProt A2BP19
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
AstE_AspA

Model 3D Structure
Model information:
Modelled residue range: 3 to 292
Based on template: [ 2gu2 ]  
Sequence Identity [%]: 30%
Model date: 2008-08-02
Revision date: 2008-08-02

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-08-02. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    3             VQ RILIVSGTHG NEINPVWAVK QFNREEN-SL KHGIEYEYII
2gu2A     4     cvaeep--ik kiaifggthg neltgvflvt hwlkngaevh raglevkpfi
                                                                      
TARGET                   s ssssss        hhhhhhh hhhh           ssssss
2gu2A            sss     s ssssss        hhhhhhh hhh   hhh      ssssss


TARGET    44    GNPVAYEKGC RYIDVDLNRS FKESE-NCDQ QKNSFYETNR ANFLLDEFGI
2gu2A     52    tnpravekct ryidcdlnrv fdlenlskex sedlpyevrr aqeinhlfgp
                                                                      
TARGET          s hhhhhh                               hhhh hhhhhhh   
2gu2A           s hhhhhh                hhhhh          hhhh hhhhhhhh  


TARGET    93    DGS-KPCQIV IDLHTTTANM GTSIVLYGRR FKDFCLAAL- ----LQNKFG
2gu2A     102   knsddaydvv fdlhnttsnx gctlil-gds gndfliqxfh yiktcxaplp
                                                                      
TARGET                 sss ssssss     ssssss       hhhhhh             
2gu2A                  sss ssssss     ssssss       hhhhhhhh hhhhhh    


TARGET    137   LPIYLHEKDK AQTGFLVEAW PCGLVIEIGA VAQNFYDPKI IDRFSLIISS
2gu2A     151   csvyliehps lkyattrsia kypvgievgp qphgvlradi ldqxrrxlkh
                                                                      
TARGET           ssss            hh    ssssssss         hhh hhhhhhhhhh
2gu2A            sssss           hh    ssssssss         hhh hhhhhhhhhh


TARGET    187   LREEIDKLKN NLIELPKELV VYVHQGSIDY PRDKKGVIDG LIHPERINQD
2gu2A     201   aldfiqrfne gkefppcaid vykixekvdy prnesgdvaa vihpnlqdqd
                                                                      
TARGET          hhhhhhhhhh       ssss ssssssss   sss   sss  sss       
2gu2A           hhhhhhhhhh       ssss ssssssss   sss   sss  sss       


TARGET    237   WKMIKKGDPL FLDSQGIVHK YDGDQLIWPV FIGEVAYKEK NIAMSYTKKE
2gu2A     251   wkplhpgdpv fvsldgkvip lggdctvypv fvneaayyek keafakttkl
                                                                      
TARGET                 sss sss   ssss s      sss      hhhhh    sssssss
2gu2A                  sss sss   ssss s      sss         hh    sssssss


TARGET    287   VICSKK ---                                            
2gu2A     301   tlnaksirst                                            
                                                                      
TARGET          ssss                                                  
2gu2A           ssss sssss

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: 80b22c0ee86315e5c5b53c989bcf9e24 on BC2-cluster at Sat Aug  2 15:38:38 2008 
NO HITS FOUND IN BLAST-SEARCH FOR SEQID-CUTOFF 60 GO TO HHSEARCH


############# TEMPLATES SELECTED #############

>80b22c0ee86315e5c5b53c989bcf9e24
****************************************************************************
>2gu2A Evalue:0 SeqID:30.537 Method:HHSEARCH Type:MODEL
*************************************************************************---


TEMPLATE ID    START          STOP           METHOD         STATUS         
2gu2A          3              292            HHSEARCH       BUILT          

FINISHED PIPELINE ON ID: 80b22c0ee86315e5c5b53c989bcf9e24 on gopt-80.cluster.bc2.ch BC2-Cluster at
Sat Aug  2 15:41:07 2008


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.