SWISS-MODEL Repository - Model Details

Model Overview
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1
322

Sequence
UniProt A2VBC4
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
Lipase

Model 3D Structure
Model information:
Modelled residue range: 13 to 316
Based on template: [ 1eth ]  
Sequence Identity [%]: 26%
Model date: 2008-08-31
Revision date: 2008-08-31

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-08-31. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    13                          GTLDR--GLI PECPFNEYDI LFFVYTRQQR
1ethA     1     sevcfprlgc fsddapwa-- givqrplkil pwsp-kdvdt rfllytnqnq
                                                                      
TARGET                                                      sssss     
1ethA           sssss   ss sss                              sssss     


TARGET    41    DGIVLTEETL QNYDLFKKS- -TISRQVVFI DHGFLSNGNN ENFIAMAKAL
1ethA     48    nnyqel---v adpstitnsn frmdrktrfi ihgfidkgee dwlsnicknl
                                                                      
TARGET             sss       hhhhh         sssss s           hhhhhhhhh
1ethA              sss       hhhhh         sssss s           hhhhhhhhh


TARGET    89    IEKDNFLVIS VDWKKGACNA FASTLDYLGY STAVGNTRHV GKYVADFTKL
1ethA     95    fkvesvncic vdwkggsrt- --------gy tqasqniriv gaevayfvev
                                                                      
TARGET          hhh   ssss ss hhh              h hhhhhhhhhh hhhhhhhhhh
1ethA           hhh   ssss ss hhhh             h hhhhhhhhhh hhhhhhhhhh


TARGET    139   LVEQYKVSMS NIRLIGHSLG AHTSGFAGKE VQELKLNKYS NIDGLDPAGP
1ethA     136   lksslgysps nvhvighslg shaageagrr tn----gtie ritgldpaep
                                                                      
TARGET          hhhh       ssssssss h hhhhhhhhhh hh         ssssss    
1ethA           hhhh       ssssssss h hhhhhhhhhh            ssssss    


TARGET    189   SFDSNDCPER LCETDAEYVQ IIHTSN---- ---ILGVYSK IGTVDFYMNY
1ethA     182   cfqgtpelvr ldpsdakfvd vihtdaapii pnlgfgmsqt vghldffpng
                                                                      
TARGET                            sss sss                     sssssss 
1ethA                             sss sss                      ssssss 


TARGET    232   GSHQPGCGRF F--------- -------SPS CSHTKAVKYL TECIKHECCL
1ethA     232   gkqmpgcqkn ilsqivdidg iwegtrdfva cnhlrsykyy adsilnpdgf
                                                                      
TARGET                                           hhhhhhhhhh hhhhh    s
1ethA                      hhhhh       hhhhhhh    hhhhhhhhh hhhhh    s


TARGET    266   IGTPWKKYFS TP-KPISQCT KDTCVCVGLN AKSYPAR--- --GSFYVPVE
1ethA     282   agfpcdsynv ftankcfpcp segcpqmghy adrfpgktng vsqvfylntg
                                                                      
TARGET          ss       h h              sss                 sssss   
1ethA           ss      hh hh             sss                 sssss   


TARGET    310   ATAPYCH -- ---------- ---------- ---------- ----------
1ethA     332   dasnfarwry kvsvtlsgkk vtghilvslf gnegnsrqye iykgtlqpdn
                                                                      
TARGET                                                                
1ethA                  sss sssssssss  ssssssssss ssssss      sssss   s


TARGET          ---------- ---------- ---------- ---------- ----------
1ethA     382   thsdefdsdv evgdlqkvkf iwynvinptl prvgaskitv erndgkvydf
                                                                      
TARGET                                                                
1ethA           ssssssss    sssssssss sss         sssssssss ss   sssss


TARGET          ---------- -------                                    
1ethA     432   csqetvreev lltlnpc                                    
                                                                      
TARGET                                                                
1ethA           ss          sss

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: e1593652260505b9e151a1ecef87f2ff on BC2-cluster at Sun Aug 31 00:03:35 2008 
NO HITS FOUND IN BLAST-SEARCH FOR SEQID-CUTOFF 60 GO TO HHSEARCH


############# TEMPLATES SELECTED #############

>e1593652260505b9e151a1ecef87f2ff
*********************************************************************************
>1ethA Evalue:0 SeqID:26.706 Method:HHSEARCH Type:MODEL
---************************--**************************************************--


TEMPLATE ID    START          STOP           METHOD         STATUS         
1ethA          13             316            HHSEARCH       BUILT          

FINISHED PIPELINE ON ID: e1593652260505b9e151a1ecef87f2ff on gopt-10.cluster.bc2.ch BC2-Cluster at
Sun Aug 31 00:08:25 2008


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.