SWISS-MODEL Repository - Model Details

Model Overview
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1
595

Sequence
UniProt A2XCN6
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
Cu-oxidase
Cu-oxidase_2
Cu-oxidase_3

Model 3D Structure
Model information:
Modelled residue range: 29 to 591
Based on template: [ 1aoz ]  
Sequence Identity [%]: 24%
Model date: 2008-08-30
Revision date: 2008-08-30

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-08-30. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    29      AAVVEQTF MVHEMNVTHL CNTTKIYVVN GRFPGPTVDV TEGDTVVVHV
1aozA     1       sqirhykw eveymfwapn cnenivmgin gqfpgptira nagdsvvvel
                                                                      
TARGET             sssssss sssssss       sssssss        sss ss sssssss
1aozA              sssssss sssssss       sssssss        sss ss sssssss


TARGET    77    INRL-PHGLT IHWHGVRQMR SCWADGAGYV TECPIHPGGE KTYRFNVTGQ
1aozA     49    tnklhtegvv ihwhgilqrg tpwadgtasi sqcainpget ffynftv-dn
                                                                      
TARGET          sss         sss                          ss sssssss   
1aozA           sss         sss                          ss sssssss   


TARGET    126   VGTLWWHAHV TCLR-ATING AFIIRPRDGK YPFPTPAKDV PIIIGEWWEL
1aozA     98    pgtffyhghl gmqrsaglyg slivdppqgk kepfhydgei nlllsdwwhq
                                                                      
TARGET           sssssss          sss sssss             sss sssssss   
1aozA            sssssss      hh  sss sssss             sss sssssss   


TARGET    175   DLIELDRRML D--GNFDDNP LSATINGKLG ---------- ------DLSN
1aozA     148   sihkqevgls skpirwigep qtillngrgq fdcsiaakyd snlepcklkg
                                                                      
TARGET           hhhhhhhhh             sssss                          
1aozA            hhhhhhh               sssss                          


TARGET    207   CSGTVEESFV LDVKRGESYL LRVINTALFS EYYFKVAGHT FTVVGADGNY
1aozA     198   sesca--pyi fhvspkktyr iriasttala alnfaignhq llvveadgny
                                                                      
TARGET                     sss   ssss ssssss     sssssss    sssssss ss
1aozA                      sss   ssss ssssss     sssssss    sssssss ss


TARGET    257   LTPYKTDMVT VAPGEAIDVL MFADAPPAY- YHMVALANQP PPPDLQIPQL
1aozA     246   vqpfytsdid iysgesysvl ittdqnpsen ywvsvgtrar hpn--tpp--
                                                                      
TARGET          ss sss  ss s   ssssss sss        ssssssss             
1aozA           ss sss  ss s   ssssss sss        ssssssss             


TARGET    306   TSRGLVRYTG AAMDSNNLPM PMPVMPDQHN TMPSYYFRRN LTGLALPEQQ
1aozA     292   -gltllnylp ns-vsklpts pppqtpawdd fdrsknftyr itaa-----m
                                                                      
TARGET           ssssssss                        hhhhhhhhh   sss      
1aozA            ssssssss                        hhhhhhhhh   sss      


TARGET    356   QRHRVPAHVD ERLLITLGLG SICRGGNTTT CKRGRSPETV VVATMNNVSF
1aozA     335   gspkppvkfn rrifllntqn ---------- v-----ingy vkwaindvsl
                                                                      
TARGET                     ssssssssss  sss         sss       sssssssss
1aozA                      ssssssssss            s     s  s ssssssssss


TARGET    406   HHTNATALLE HYYDGTPEGV YTEDFPVRPP RPFNYTDREL IPAGPLEAAL
1aozA     370   alpptpylga mky-nllhaf d-qnpppevf -pedydidtp p----tn---
                                                                      
TARGET          s     hhhh hh                                         
1aozA           s     hhhh hhh                                        


TARGET    456   EPTAKAMRLR RFRYNASVEI VFQSTTL--- LQSDSNPMHL HGYDVFVLAQ
1aozA     410   ektrigngvy qfkigevvdv ilqnanmmke nlsethpwhl hghdfwvlgy
                                                                      
TARGET             sss   s ss   sssss ssss            sssss s   ssssss
1aozA              sss   s ss   sssss ssss            sssss s   ssssss


TARGET    503   GLGNFDPKRD VEKFNYHNPQ LRNTVQVPRG GWAAVRFLTD NPGMWYLHCH
1aozA     460   gdgkfsaeee -sslnlknpp lrntvvifpy gwtairfvad npgvwafhch
                                                                      
TARGET          sss                 s sssssss  s sssssssss      ssssss
1aozA           sss         h       s sssssss  s sssssssss    ssssssss


TARGET    553   FEFHIIMGMA TAFIVEDGPT PETSLPPPPP EFKRCGTNG  --------- 
1aozA     509   iephlhmgmg vvfae--gv- -e-kvgript kalacggtak slinnpknp 
                                                                      
TARGET           hhhhhh ss ssssss   h hhh        hhh                  
1aozA            hhhhh  ss sssss                 hhh   hhhh hh

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: ede46c6355f5b7e2772165140b897f7b on BC2-cluster at Sat Aug 30 20:31:04 2008 
NO HITS FOUND IN BLAST-SEARCH FOR SEQID-CUTOFF 60 GO TO HHSEARCH


############# TEMPLATES SELECTED #############

>ede46c6355f5b7e2772165140b897f7b
*************************************************************************************
>1aozA Evalue:0 SeqID:24.702 Method:HHSEARCH Type:MODEL
----**********************************************-***--********-****************-**-


TEMPLATE ID    START          STOP           METHOD         STATUS         
1aozA          29             591            HHSEARCH       BUILT          

FINISHED PIPELINE ON ID: ede46c6355f5b7e2772165140b897f7b on gopt-59.cluster.bc2.ch BC2-Cluster at
Sat Aug 30 20:37:42 2008


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.