SWISS-MODEL Repository - Model Details

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1
168

Sequence
UniProt A2Z8F9
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
Cyanate_lyase

Model 3D Structure
Model information:
Modelled residue range: 11 to 153
Based on template: [ 1dw9 ]  
Sequence Identity [%]: 34%
Model date: 2008-08-30
Revision date: 2008-08-30

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-08-30. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    11                   GVVRRL MAAKAESRKS FSEIGEEAGL TNVYVAQLLR
1dw9A     2     xiqsqinrni rl--dladai llskakkdls faeiadgtgl aeafvtaall
                                                                      
TARGET                          hhhhh hhhhhhh    hhhhh       hhhhhhhhh
1dw9A                   hh hh  hhhhhh hhhhhhh    hhhhh       hhhhhhhhh


TARGET    47    RQAQLKPETA PALRAAVPGL TDDLVALMME PPFRS-YHPD IVHEPAIYRL
1dw9A     49    gqqalpadaa rlv-gakldl dedsilllqx iplrgciddr iptdptxyrf
                                                                      
TARGET                hhhh hh          hhhhhhh                  hhhhhh
1dw9A                 hhhh hhh hhhh    hhhhhhh                  hhhhhh


TARGET    96    NEAVMHFGES IKEIINEEFG DGIMSAIDFY CSVDKVQGAD GKDRVVVTFD
1dw9A     98    yexlqvygtt lkalvhekfg dgiisainfk ldvkkvadpe ggeravitld
                                                                      
TARGET          hhhhh   hh hhhhhhhh   sssss  sss ssssssss    sssssssss
1dw9A           hhhhh   hh hhhhhhhh   sssss  sss ssssssss    sssssssss


TARGET    146   GKYLPYSE                                              
1dw9A     148   gkylptkpf                                             
                                                                      
TARGET          ssssss                                                
1dw9A           ssssss

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: 76dddfbadf8e1099c21afe9462e4a663 on BC2-cluster at Sat Aug 30 05:15:09 2008 
NO HITS FOUND IN BLAST-SEARCH FOR SEQID-CUTOFF 60 GO TO HHSEARCH


############# TEMPLATES SELECTED #############

>76dddfbadf8e1099c21afe9462e4a663
************************************************************************************
>1dw9A Evalue:0 SeqID:34.028 Method:HHSEARCH Type:MODEL
-----************************************************************************-------


TEMPLATE ID    START          STOP           METHOD         STATUS         
1dw9A          11             153            HHSEARCH       BUILT          

FINISHED PIPELINE ON ID: 76dddfbadf8e1099c21afe9462e4a663 on gopt-31.cluster.bc2.ch BC2-Cluster at
Sat Aug 30 05:17:36 2008


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.