SWISS-MODEL Repository - Model Details

Model Overview
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Sequence
UniProt A9GJ37
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
ketoacyl-synt
ketoacyl-synt
ketoacyl-synt
ketoacyl-synt
PP-binding
PP-binding
PP-binding
PP-binding
Ketoacyl-synt_C
Ketoacyl-synt_C
Ketoacyl-synt_C
Ketoacyl-synt_C
KR
KR
KR
Methyltransf_23

Model 3D Structure
Model information:
Modelled residue range: 2949 to 3169
Based on template: [ 2fk7 ]  
Sequence Identity [%]: 14%
Model date: 2008-08-10
Revision date: 2008-08-10

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-08-10. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    2949                                       VIEKQL EMRRVIFRHE
2fk7A     22    qahydvsddf falfqdptrt yscayfeppe lt--leeaqy akvdlnldkl
                                                                      
TARGET                                                hhhhh hhhhhhhhh 
2fk7A                   hh hh                        hhhhhh hhhhhhhhh 


TARGET    2965  RLESVRKVLD IGCGCGTDLV EVAKRCPHAK AHGFTITRAQ ADLANRRIGR
2fk7A     70    dlkpgmtlld igcgwgttmr raverfd-vn vigltlsknq harceqvlas
                                                                      
TARGET               sssss ss    hhhh hhhh     s sssss  hhh hhhhhhhhh 
2fk7A                sssss ss    hhhh hhhhh    s sssss  hhh hhhhhhhhh 


TARGET    3015  LGLAERVRVF HADSSKDRFP DTYDLILGFE VTCHIADKTG VFGNISSALS
2fk7A     119   idtnrsrqvl lqgwed--fa epvdrivsie afeh-enydd ffkrcfnimp
                                                                      
TARGET               sssss ss             ssssss        hhh hhhhhhh   
2fk7A                sssss ss             ssssss        hhh hhhhhhh   


TARGET    3065  PHGSVLLMDF VSNLRGAIVD GNVDIA---- ---------- -----ISTQD
2fk7A     169   adgrmtvqss vsyhpyemaa rgkklsfeta rfikfivtei fpggrlpste
                                                                      
TARGET          ssssssssss s   hhhhh                                hh
2fk7A           ssssssssss s   hhhhh    hhhhhhhh hhhhhhh            hh


TARGET    3096  EWINVLTASS LVVDDIVDLS PQIANYV--- ---FDPDVEK NIAHFP-EAA
2fk7A     219   mmvehgekag ftvpeplslr phyiktlriw gdtlqsnkdk aievtseevy
                                                                      
TARGET          hhhhhhhhh        sssh hhhh               hh hhhh     h
2fk7A           hhhhhhhh         sssh hhhhhhhhhh hhhhh   hh hhh   hhhh


TARGET    3139  RRSSRNFANM AVSLREEWIS YCLLRLTKAG P -                  
2fk7A     269   nrymkylrgc ehyftdemld cslvtylkpg aaa                  
                                                                      
TARGET          hhhhhhhhhh hhhhhh   s ssssssssss                      
2fk7A           hhhhhhhhhh hhhhhh   s ssssssssss

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: 33d4ff3b02f8a8404eaffd004d7d2029 on BC2-cluster at Sun Aug 10 13:20:44 2008 
NO HITS FOUND IN BLAST-SEARCH FOR SEQID-CUTOFF 60 GO TO HHSEARCH


############# TEMPLATES SELECTED #############

>33d4ff3b02f8a8404eaffd004d7d2029
*********************************************************************************
>2qo3A Evalue:0 SeqID:39.770 Method:HHSEARCH Type:MODEL
--------------*******------------------------------------------------------------
>2hg4A Evalue:0 SeqID:37.500 Method:HHSEARCH Type:MODEL
-----------------------------------------------------********--------------------
>1w0iA Evalue:0 SeqID:25.513 Method:HHSEARCH Type:MODEL
------------------------------------------------------------------------*******--
>2fr0A Evalue:0 SeqID:24.923 Method:HHSEARCH Type:MODEL
------*****----------------------------------------------------------------------
>2fr0A Evalue:1.1E-43 SeqID:26.537 Method:HHSEARCH Type:MODEL
-----------------------------****------------------------------------------------
>2fk7A Evalue:3.4E-19 SeqID:14.575 Method:HHSEARCH Type:MODEL
-----------------------------------------------***-------------------------------
>1ee0A Evalue:6.3E-10 SeqID:11.881 Method:HHSEARCH Type:MODEL
-------------------------------------*****---------------------------------------
>2ju1A Evalue:1.6E-08 SeqID:29.730 Method:HHSEARCH Type:MODEL
------------*--------------------------------------------------------------------
>2afdA Evalue:1.4E-07 SeqID:25.316 Method:HHSEARCH Type:MODEL
----------------------------------------------------------------------**---------
>1nq4A Evalue:4.3E-06 SeqID:22.034 Method:HHSEARCH Type:MODEL
-----------------------------------*---------------------------------------------
>2hg4A Evalue:0 SeqID:38.912 Method:HHSEARCH Type:MODEL
--------------*******------------------------------------------------------------
>2uv8A Evalue:0 SeqID:12.940 Method:HHSEARCH Type:MODEL
------------------------------------------------------------------*************--
>2uv8A Evalue:0 SeqID:12.729 Method:HHSEARCH Type:MODEL
-------**************------------------------------------------------------------
>2z5lA Evalue:8.2E-42 SeqID:25.886 Method:HHSEARCH Type:MODEL
----------------------------*****------------------------------------------------
>1zemA Evalue:3.6E-14 SeqID:19.331 Method:HHSEARCH Type:MODEL
------------------------------****-----------------------------------------------


TEMPLATE ID    START          STOP           METHOD         STATUS         
2qo3A          891            1323           HHSEARCH       BUILT          
2hg4A          3330           3823           HHSEARCH       BUILT          
1w0iA          4561           4976           HHSEARCH       BUILT          
2fr0A          388            711            HHSEARCH       BUILT          
2fr0A          1798           2100           HHSEARCH       BUILT          
2fk7A          2949           3169           HHSEARCH       BUILT          
1ee0A          2360           2643           HHSEARCH       NOT BUILT      
2ju1A          757            829            HHSEARCH       BUILT          
2afdA          4439           4517           HHSEARCH       BUILT          
1nq4A          2183           2241           HHSEARCH       BUILT          
2hg4A          891            1364           HHSEARCH       BUILT          
2uv8A          4131           4977           HHSEARCH       NOT BUILT      
2uv8A          467            1321           HHSEARCH       NOT BUILT      
2z5lA          1751           2106           HHSEARCH       BUILT          
1zemA          1874           2133           HHSEARCH       NOT BUILT      

FINISHED PIPELINE ON ID: 33d4ff3b02f8a8404eaffd004d7d2029 on gopt-65.cluster.bc2.ch BC2-Cluster at
Sun Aug 10 14:10:06 2008


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.