SWISS-MODEL Repository - Model Details

Model Overview
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1
572

Sequence
UniProt B0WYY2
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

STRING
B0WYY2: 7176.CPIJ012259-

Domain
Link to: [ InterPro ]
FERM_M
ERM
FERM_N
FERM_C

Model 3D Structure
Model information:
Modelled residue range: 1 to 572
Based on template: [ 2i1k ]  
Sequence Identity [%]: 82%
Model date: 2008-07-24
Revision date: 2008-07-24

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-07-24. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    1         MNVRVT TMDAELEFAI QQSTTGKQLF DQVVKTIGLR EVWFFGLQYT
2i1kA     3     ks--mnvrvt tmdaelefai qqtttgkqlf dqvvktiglr evwffglqyt
                                                                      
TARGET              ssssss s  sssssss    ssshhhh hhhhhhh       sssssss
2i1kA               ssssss s  sssssss      hhhhh hhhhhhh       sssssss


TARGET    47    DSKGDLTWIK LYKKVMSQDV QKGDPLQFKF RAKFYPEDVA EELIQDITLR
2i1kA     51    dskgdltwik lykkvmqqdv kkenplqfkf rakfypedva deliqeitlk
                                                                      
TARGET          s   sssss    sss           sssss sss     hh hh   hhhhh
2i1kA           s   sssss       hh         sssss sss     hh hh   hhhhh


TARGET    97    LFYLQVKNAI LSDEIYCPPE TSVLLASYAV QARHGDYNKT THTPGFLVND
2i1kA     101   lfylqvknai lsdeiycppe tsvllasyav qarhgdhnpa vhgpgfland
                                                                      
TARGET          hhhhhhhhhh hh      hh hhhhhhhhhh hhh                  
2i1kA           hhhhhhhhhh hh      hh hhhhhhhhhh hhh                  


TARGET    147   RLLPQRVIDQ HKMSKDEWEN SITTWWQEHR GMLREDAMME YLKIAQDLEM
2i1kA     151   rllpqrvtdq hkmsreeweq sitnwwqehr gmlredamme ylkiaqdlem
                                                                      
TARGET              hhhhhs ss  hhhhhh hhhhhhh       hhhhhhh hhhhhh    
2i1kA               hhhhhs ss  hhhhhh hhhhhhhh      hhhhhhh hhhhhh    


TARGET    197   YGVNYFEIRN KKGTELWLGV DALGLNIYEK DDRLTPKIGF PWSEIRNISF
2i1kA     201   ygvnyfeirn kkntelwlgv dalglniyek ddkltpkigf pwseirnisf
                                                                      
TARGET             sssss        sssss s  sssss          sss    sssssss
2i1kA              sssss        sssss s  sssss          sss    sssssss


TARGET    247   NDRKFIIKPI DKKAPDFVFF APRVRINKRI LALCMGNHEL YMRRRKPDTI
2i1kA     251   ndrkfiikpi dkkapdfvff aprvrvnkri lalcmgnhel ymrrrkpdti
                                                                      
TARGET          ssssssssss       ssss s   hhhhhh hhhhhhhhhh hhhh     h
2i1kA           ssssssssss       ssss s   hhhhhh hhhhhhhhhh hhhh     h


TARGET    297   DVQQMKAQAR EEKNAKQQER EKLQLALAAR ERAEKKQQEY EDRIRNMQEE
2i1kA     301   dvqqmkaqar eeklakqaqr e-----iaar eraekkqqey qdrlrqmqee
                                                                      
TARGET          hhhhhhhhhh hhhhhhhhh          hh hhhhhhhhhh hhhhhhhhhh
2i1kA           hhhhhhhhhh hhhhhhhhh          hh hhhhhhhhhh hhhhhhhhhh


TARGET    347   MERSQANLIE AQDMIRRLEE QLKQLQAAKD DLEQRQNELQ VMITRLEETK
2i1kA     351   mersqanlle aqdmilrlee qlrqlqaake eleqrqnelq ammqrleet-
                                                                      
TARGET          hhhhhhhhhh hhhhhhhhhh hhhhhhhhhh hhhhhhhhhh hhhhhhh   
2i1kA           hhhhhhhhhh hhhhhhhhhh hhhhhhhhhh hhhhhhhhhh hhhhhhh   


TARGET    397   NMEAAERAKL EDEIRMKQEE VHKIQEEVSV KDSETKRLQE EVEEARRKQT
2i1kA     410   ---------l edeirakqee vsriqqevel kdsetrrlqe evedarrkqd
                                                                      
TARGET          sss   sss  hhhhhhhhhh hhhhhhhhhh hhhhhhhhhh hhhhhhhhhh
2i1kA                      hhhhhhhhhh hhhhhhhhhh hhhhhhhhhh hhhhhhhhhh


TARGET    447   EAAAALLAAT TTPSHHHVEE EEEMDNEEEL VNGENGNQDF SKDFDTDEHI
2i1kA     451   eaaaa-llaa ttpqhhhvae rad------- ---esgggdl argpdd---l
                                                                      
TARGET          hhhhhh                              sssssss           
2i1kA           hhhhh hhh                           sssssss           


TARGET    497   KDPVEERRTL AERNERLHDQ LKALKQDLAL SRDDTMETAN DKIHRENVRQ
2i1kA     500   vdpvadrrtl aernerlhnq lkalkqdlar scdetketam dkihrenvrq
                                                                      
TARGET             hhh   h hh   hhhhh hhhhhhhhh  sss     hh hhhhhhhhhh
2i1kA              hh    h hh   hhhhh hhhhhhhhh  sss     hh hhhhhhhhhh


TARGET    547   GRDKYKTLRE IRKGNTKRRV DQFENM                          
2i1kA     550   grdkyktlre irkgntkrrv dqfenm-                         
                                                                      
TARGET             hhhhhhh h    hhhhh hhhhh                           
2i1kA              hhhhhhh h     hhhh hhhhh

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: a5fed03ac939235821d7957f2b5ee39c on BC2-cluster at Thu Jul 24 23:27:12 2008 
BLAST_TEMPLATE SELECTION SUCCESSFUL TEMPLATES FOUND:  1 GO TO MODELING STEP


############# TEMPLATES SELECTED #############

>a5fed03ac939235821d7957f2b5ee39c
**********************************************************************************
>2i1kA Evalue:0 SeqID:82.343 Method:BLAST Type:MODEL
*********************************************-**********--*********-**************


TEMPLATE ID    START          STOP           METHOD         STATUS         
2i1kA          1              572            BLAST          BUILT          

FINISHED PIPELINE ON ID: a5fed03ac939235821d7957f2b5ee39c on gopt-58.cluster.bc2.ch BC2-Cluster at
Thu Jul 24 23:28:47 2008


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.