SWISS-MODEL Repository

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SWISS-MODEL Repository - Model Details

Model Overview

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572

Sequence

UniProt

B9DFS6

Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain

Link to: [ InterPro ]

	PX
	Vps5

Model 3D Structure

	Model information:
	Modelled residue range:	144 to 264
	Based on template:	[ 3iq2 ]
	Sequence Identity [%]:	38%
	Model date:	2013-05-05
	Revision date:	2013-04-01

Quaternary structure information:	[details]
Template (3iq2): MONOMER Model built: SINGLE CHAIN

Ligand information:	[details]
Ligands in the template: GOL: 1, SO4: 7. Ligands in the model: none.

Template Links: [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

Alignment


TARGET    1                  ITVSNPQK EQEATNSMIP GGSTYITYQI TTRTNLSDYG
3iq2A     24    mdepdlkdlf --itvdepe- ------shvt tietfityri itktsrgefd
                                                                      
TARGET                        sss      hhh   sss   sss  sss ssss      
3iq2A                    s   ssss  s        ssss   ssssssss ssss      


TARGET    39    GSEFSVRRRF RDIVTLADRL AESYRGFCIP PRPDKSIVES QVMQKQEFVE
3iq2A     65    ssefevrrry qdflwlkgkl eeahptliip plpekfmver ---fnddfie
                                                                      
TARGET           sssssss   hhhhhhhhhh hhh                        hhhhh
3iq2A            sssssss   hhhhhhhhhh hhh                        hhhhh


TARGET    89    QRRVALEKYL RRLVAHPVIR NSDELKVFLQ AQG -                
3iq2A     116   trrkalhkfl nriadhptlt fnedfkiflt aqawe                
                                                                      
TARGET          hhhhhhhhhh hhhh   hh    hhhhhhh                       
3iq2A           hhhhhhhhhh hhhh   hh    hhhhhhh

Quality

[ start new quality assessment in Workspace ]

Ligand Modelling Log

Template's ligands section 
Ligands in the template: GOL: 1, SO4: 7. 
The template contains ligands that are not yet part of the pipeline. Ligands which are currently assessed are listed in the help page. 
No ligands were included in the model.

Oligomer Modelling Log

Quaternary Structure Annotation of the Template 
 3iq2 is annotated as MONOMER 
 The oligomeric state of the structure was assigned by the authors of the corresponding PDB entry 
 The following biological unit was used to build the template structure: 3iq2.pdb1.gz 
      
 
Quaternary Structure Modelling of the Target Protein 
 Analysis of evolutionary and family specific aspects revealed non-conservation of the oligomeric structure 
 Hence, the oligomeric structures of the target and the template cannot be assumed to be similar (=MONOMER) 
 The target structure was calculated as SINGLE CHAIN 
 The corresponding reliability score is 0.29 (>0.5 indicates similarity)

Template Selection

 - Start SMR-Pipeline for:2d0722aae1bbae12dd20027d63c250bc on BC2-cluster at Sun May  5 13:09:01
2013 


 - Analyze BLAST summary ... 
 - No templates found with BLAST (seqid-cutoff: 60): go to HHSEARCH

 - Run HHSearch to detect more templates...
 - Generate new template library
 - Run template selection against modified template library 
 - Summarize templates: 
 - No template with A found
 - Proof template(s) selection compared to previous Repository update
 - Different number of templates selected (old0 vs new:3): model based on new templates
 - Send 3 Templates for modeling

 - @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@
 -                     *****************
 - building model based on 3iq2A (144-264) was successful 
 -                                                *********************************
 - building model based on 4atmA (336-572) was not successful go to next best template
 -                                                ********************************
 - building model based on 3sogA (337-566) was successful 
 -                   *************************************************************
 - building model based on 2rajA (129-566) was successful 
 - Repository Pipeline parameter

   Cut-off parameters to model the target based on a BLAST target-template alignment
    Evalue :                                     0.0001
    Minimum Template size (aa) for ranking :     25
    Minimum Sequence identity :                  60

   Cut-off parameters to model the target based on a HHSearch target-template alignment
    Evalue :                                     0.0001
    Probability :                                50
    MAC :                                        0.3

   Parameters for model selection
    Minimal number of uncovered target
     residues after BLAST to run HHSEARCH :      50
    Minimal number of uncovered target
     residues to model an additional template :  25
    
 - Finish SMR-Pipeline for:2d0722aae1bbae12dd20027d63c250bc on BC2-cluster at Sun May  5 13:22:31
2013

Template Search

[ start new template identification in Workspace ]

Template Description

Match

Chain

SeqId

3iq2: HUMAN SORTING NEXIN 7, PHOX HOMOLOGY (PX) DOMAIN
Solved by: X-RAY, Resolution: 1.70A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	138-265	3iq2A	35%	>target ----SSDYIKITVSNPQKEQEATNSMIPGGSTYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESYRGFCIPPRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLVAHPVIRNSDELKVFLQAQGK- >3iq2A MDEPDLKDLFITVDEPESHVT-------TIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFMVE---RFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWE [Model]
	138-265	3iq2B	35%	>target ----SSDYIKITVSNPQKEQEATNSMIPGGSTYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESYRGFCIPPRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLVAHPVIRNSDELKVFLQAQGK- >3iq2B MDEPDLKDLFITVDEPESHVT-------TIETFITYRIITKTSRGEFDSSEFEVRRRYQDFLWLKGKLEEAHPTLIIPPLPEKFMVE---RFNDDFIETRRKALHKFLNRIADHPTLTFNEDFKIFLTAQAWE [Model]

2i4k: SOLUTION STRUCTURE OF THE PX DOMAIN OF SORTING NEXIN 1
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

140-263

2i4kA

31%

2yps: CRYSTAL STRUCTURE OF THE PX DOMAIN OF HUMAN SORTING NEXIN
Solved by: X-RAY, Resolution: 2.60A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

136-263	2ypsA	28%	>target -SLSSDYIKITVSNPQKEQEATNSMIPGGSTYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESYRGFCIPPRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLVAHPVIRNSDELKVFLQAQ >2ypsA SMPPSNFLEIDVSNPGR------------GRFTTYEIRVKTNLPIFKLKESTVRRRYSDFEWLRSELER-ESKVVVPPLPGKA---------FNFIEERKQGLEQFINKVAGHPLAQNERCLHMFLQDE [Model]
140-263	2ypsB	27%	>target DYIKITVSNPQKEQEATNSMIPGGSTYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESYRGFCIPPRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLVAHPVIRNSDELKVFLQAQ >2ypsB NFLEIDVSNG-------------RGRFTTYEIRVKTNLPIFKLKESTVRRRYSDFEWLRSELER-ESKVVVPPLPGKA--------FDNFIEERKQGLEQFINKVAGHPLAQNERCLHMFLQDE [Model]
140-261	2ypsC	28%	>target DYIKITVSNPQKEQEATNSMIPGGSTYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESYRGFCIPPRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLVAHPVIRNSDELKVFLQ- >2ypsC NFLEIDVSNG-------------RGRFTTYEIRVKTNLPIFKLKESTVRRRYSDFEWLRSELER-ESKVVVPPLPGKA-----------FIEERKQGLEQFINKVAGHPLAQNERCLHMFLQD [Model]
140-263	2ypsD	28%	>target DYIKITVSNPQKEQEATNSMIPGGSTYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESYRGFCIPPRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLVAHPVIRNSDELKVFLQAQ-- >2ypsD NFLEIDVSN-------------GRGRFTTYEIRVKTNLPIFKLKESTVRRRYSDFEWLRSELER-ESKVVVPPLPGKA-----------FIEERKQGLEQFINKVAGHPLAQNERCLHMFLQDEII [Model]

2csk: SOLUTION STRUCTURE OF PX DOMAIN FROM HUMAN SNX12
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

137-264

2cskA

28%

3lui: CRYSTAL STRUCTURE OF THE SNX17 PX DOMAIN WITH BOUND SULPHA
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

163-264	3luiA	25%	>target ----------GSTYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESYRGFCIPPRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLVAHPVIRNSDELKVFLQAQG---- >3luiA HFSIPETESRSSAYVAYNIHVN--------GVLHCRVRYSQLLGLHEQLRKEYGANVLPAFPPKKLFS----LTPAEVEQRREQLEKYMQAVRQDPLLGSSETFNSFLRRAQQETQ [Model]
163-264	3luiB	25%	>target -----------GSTYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESYRGFCIPPRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLVAHPVIRNSDELKVFLQAQG----- >3luiB MHFSIPETESRGSAYVAYNIHVN--------GVLHCRVRYSQLLGLHEQLRKEYGANVLPAFPPKKLFS----LTPAEVEQRREQLEKYMQAVRQDPLLGSSETFNSFLRRAQQETQQ [Model]
140-264	3luiC	22%	>target DYIKITVSNPQKEQEATNSMIPGGSTYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESYRGFCIPPRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLVAHPVIRNSDELKVFLQAQG--- >3luiC NAMHFSIPETESRSS-------GGSAYVAYNIHVN--------GVLHCRVRYSQLLGLHEQLRKEYGANVLPAFPPKKLFS----LTPAEVEQRREQLEKYMQAVRQDPLLGSSETFNSFLRRAQQET [Model]

3p0c: NISCHARIN PX-DOMAIN
Solved by: X-RAY, Resolution: 2.27A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	163-263	3p0cA	25%	>target ----------------GSTYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESYRGFCIPPRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLVAHPVIRNSDELKVFLQAQ--- >3p0cA NLYFQSMEARVVGSELVDTYTVYIIQVTDG-----SHEWTVKHRYSDFHDLHEKLVAERKI-DKNLLPPKKIIG---KNSRSLVEKREKDLEVYLQKLLAAFPGVTPRVLAHFLHFHFYE [Model]
	163-264	3p0cB	25%	>target -----------GSTYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESYRGFCIPPRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLVAHPVIRNSDELKVFLQAQG---- >3p0cB SMEARVVGSELVDTYTVYIIQVTDG-----SHEWTVKHRYSDFHDLHEKLVAERK-IDKNLLPPKKIIG---KNSRSLVEKREKDLEVYLQKLLAAFPGVTPRVLAHFLHFHFYEIN [Model]

3fog: CRYSTAL STRUCTURE OF THE PX DOMAIN OF SORTING NEXIN-17 (SNX17)
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

163-263

3fogA

24%

3hpc: CRYSTAL STRUCTURE OF SNX5-PX DOMAIN IN P21 SPACE GROUP
Solved by: X-RAY, Resolution: 1.47A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

140-267

3hpcX

22%

1ocs: CRYSTAL STRUCTURE OF THE YEAST PX-DOAMIN PROTEIN GRD19P (SORTING NEXIN3) COMPLEXED TO PHOSPHATIDYLINOSYTOL-3- PHOSPHATE.
Solved by: X-RAY, Resolution: 2.03A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

138-264

1ocsA

22%

3hpb: CRYSTAL STRUCTURE OF SNX5-PX DOMAIN IN P212121 SPACE GROUP
Solved by: X-RAY, Resolution: 2.19A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

140-267

3hpbA

22%

1ocu: CRYSTAL STRUCTURE OF THE YEAST PX-DOMAIN PROTEIN GRD19P (SORTING NEXIN 3) COMPLEXED TO PHOSPHATIDYLINOSYTOL-3- PHOSPAHTE.
Solved by: X-RAY, Resolution: 2.30A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	136-264	1ocuA	22%	>target --SLSSDYIKITVSNPQKEQEATNSMIPGGSTYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAE----SYRGFCIPPRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLVAHPVIRNS-DELKVFLQAQG-- >1ocuA IYAEPENFLEIEVHNPKTHIPNG---MDSKGMFTDYEIICRTNLPSFHKRVSKVRRRYSDFEFFRKLIKEISMLNHPKVMVPHLPGKILLSNR--FSNEVIEERRQGLNTWMQSVAGHPLLQSGSKVLVRFIEAEKFV [Model]
	138-264	1ocuB	22%	>target -SSDYIKITVSNPQKEQEATNSMIPGGSTYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAE----SYRGFCIPPRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLVAHPVIRNS-DELKVFLQAQG--- >1ocuB EPENFLEIEVHNPKTHIPNG---MDSKGMFTDYEIICRTNLPSFHKRVSKVRRRYSDFEFFRKLIKEISMLNHPKVMVPHLPGKILLSNR--FSNEVIEERRQGLNTWMQSVAGHPLLQSGSKVLVRFIEAEKFVG [Model]

2l73: STRUCTURE OF THE NOXO1B PX DOMAIN
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

164-265

2l73A

21%

2ett: SOLUTION STRUCTURE OF HUMAN SORTING NEXIN 22 PX DOMAIN
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

142-263

2ettA

20%

1xtn: CRYSTAL STRUCTURE OF CISK-PX DOMAIN WITH SULFATES
Solved by: X-RAY, Resolution: 2.20A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	142-263	1xtnA	20%	>target ---IKITVSNPQKEQEATNSMIPGGSTYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESYRGFCIPPRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLVAHPVIRNSDELKVFLQAQ- >1xtnA ESCPSVSIPSSDEHRE-------KKKRFTVYKVLVSVG-----RSEWFVFRRYAEFDKLYNSLKKQFPAMAL-KIPAKRIFGDN--FDPDFIKQRRAGLNEFIQNLVRYPELYNHPDVRAFLQMDS [Model]
	143-265	1xtnB	20%	>target --KITVSNPQKEQEATNSMIPGGSTYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESYRGFCIPPRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLVAHPVIRNSDELKVFLQAQGK--- >1xtnB CPSVSIPSSDEHRE-------KKKRFTVYKVLVSVG-----RSEWFVFRRYAEFDKLYNSLKKQFPAMA-LKIPAKRIFGDN--FDPDFIKQRRAGLNEFIQNLVRYPELYNHPDVRAFLQMDSPRHQ [Model]

1h6h: STRUCTURE OF THE PX DOMAIN FROM P40PHOX BOUND TO PHOSPHATIDYLINOSITOL 3-PHOSPHATE
Solved by: X-RAY, Resolution: 1.70A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

141-265

1h6hA

20%

1xte: CRYSTAL STRUCTURE OF CISK-PX DOMAIN
Solved by: X-RAY, Resolution: 1.60A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

142-265

1xteA

19%

2dyb: THE CRYSTAL STRUCTURE OF HUMAN P40(PHOX)
Solved by: X-RAY, Resolution: 3.15A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	142-267	2dybA	20%	>target -------------IKITVSNPQKEQEATNSMIPGGSTYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESYRGFCIPPRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLVAH-PVIRNSDELKVFLQAQGKLP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >2dybA AESDFEQLPDDVAISANIADIEEK--------RGFTSHFVFVIEVKTKG----GSKYLIYRRYRQFHALQSKLEERFG--TLPTLPAKVYVGV----KQEIAEMRIPALNAYMKSLLSLPVWVLMDEDVRIFFYQSPYDSEQVPQALRRLRPRRMAAPRAEALFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVKILKDFPEEDDPTNWLRCYYYEDTISTIKDIAVEEDLSSTPLLKDLLELTRREFQREDIALNYRDAEGDLVRLLSDEDVALMVRQARGLPSQKRLFPWKLHITQKD [Model]
	141-266	2dybB	19%	>target ------------YIKITVSNPQKEQEATNSMIPGGSTYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESYR----GFCIPPRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLVAHPV-IRNSDELKVFLQAQGKL------------------------------------------------------------------------------------------------------------------------------------------------------ >2dybB AESDFEQLPDDVAISANIADIEEK--------RGFTSHFVFVIEVKTKG----GSKYLIYRRYRQFHALQSKLEERFGKSSALATLPTLPGVK---------QEIAEMRIPALNAYMKSLLSLPVWVLMDEDVRIFFYQSPYDSEQVPQALRRPRAEALFDFTGNSKLELNFKAGDVIFLLSRINKDWLEGTVRGATGIFPLSFVKILKDFPDPTNWLRCYYYEDTISTIKDIAVEEDLSSTPLLKDLLELTRREFQREDIALNYRDDLVRLLSDEDVALMVRQFPWKLHITQ [Model]

1o7k: HUMAN P47 PX DOMAIN COMPLEX WITH SULPHATES
Solved by: X-RAY, Resolution: 2.00A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

140-263	1o7kA	19%	>target -----DYIKITVSNPQKEQEATNSMIPGGSTYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESYRGFCIPPRPDKSIVE---SQ-VMQKQEFVEQRRVALEKYLRRLVAHP-VIRNSDELKVFLQAQ-- >1o7kA HMGDTFIRHIALLGFEKRFV--------PSQHYVYMFLVKWQ----DLSEKVVYRRFTEIYEFHKTLKEMFPIEAGAINPENRIIPHLPAPKWFDGQRAAENRQGTLTEYCSTLMSLPTKISRCPHLLDFFKVRPD [Model]
141-263	1o7kB	19%	>target --YIKITVSNPQKEQEATNSMIPGGSTYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESYRGFCIPPRPDKSIVES----QVMQKQEFVEQRRVALEKYLRRLVA-HPVIRNSDELKVFLQAQ-- >1o7kB TFIRHIALLGFEKRFV--------PSQHYVYMFLVKWQ----DLSEKVVYRRFTEIYEFHKTLKEMFPIEAGAINPENRIIPHLPAPKWFDGQRAAENRQGTLTEYCSTLMSLPTKISRCPHLLDFFKVRPD [Model]
141-263	1o7kC	19%	>target --YIKITVSNPQKEQEATNSMIPGGSTYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESYRGFCIPPRPDKSIVES----QVMQKQEFVEQRRVALEKYLRRLVA-HPVIRNSDELKVFLQAQ-- >1o7kC TFIRHIALLGFEKRFV--------PSQHYVYMFLVKWQ----DLSEKVVYRRFTEIYEFHKTLKEMFPIEAGAINPENRIIPHLPAPKWFDGQRAAENRQGTLTEYCSTLMSLPTKISRCPHLLDFFKVRPD [Model]

4az9: CRYSTAL STRUCTURE OF PHOX HOMOLOGY DOMAIN OF HUMAN SORTINGNEXIN 24
Solved by: X-RAY, Resolution: 1.75A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	141-263	4az9B	18%	>target --------YIKITVSNPQKEQEATNSMIPGGSTYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESYRGFCIPPRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLVAHPVIRNSDELKVFLQAQ-- >4az9B GTENLYFQSMEVYIPSFRYEESD------LERGYTVFKIEVLMN-----GRKHFVEKRYSEFHALHKKLKKCIK---TPEIPSKHVR----NWVPKVLEQRRQGLETYLQAVILENEEL-PKLFLDFLNVRHL [Model]
	141-261	4az9A	18%	>target --------YIKITVSNPQKEQEATNSMIPGGSTYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESYRGFCIPPRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLVAHPVIRNSDELKVFLQ- >4az9A GTENLYFQSMEVYIPSFRYEESD------LERGYTVFKIEVLMN-----GRKHFVEKRYSEFHALHKKLKKCIK---TPEIPSKHVR----NWVPKVLEQRRQGLETYLQAVILENEEL-PKLFLDFLNV [Model]

1gd5: SOLUTION STRUCTURE OF THE PX DOMAIN FROM HUMAN P47PHOX NADPH OXIDASE
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

140-265

1gd5A

18%

1kq6: P47PHOX PX DOMAIN
Solved by: X-RAY, Resolution: 1.18A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

141-265

1kq6A

18%

2v14: KINESIN 16B PHOX-HOMOLOGY DOMAIN (KIF16B)
Solved by: X-RAY, Resolution: 2.2A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

140-259

2v14A

18%

1kmd: SOLUTION STRUCTURE OF THE VAM7P PX DOMAIN
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

141-263

1kmdA

18%

3sog: CRYSTAL STRUCTURE OF THE BAR DOMAIN OF HUMAN AMPHIPHYSIN,
Solved by: X-RAY, Resolution: 2.30A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

337-566

3sogA

15%

4atm: CRYSTAL STRUCTURE OF THE BAR DOMAIN OF HUMAN AMPHIPHYSIN, ISOFORM 1 AT 1.8 ANGSTROM RESOLUTION FEATURING INCREASED ORDER AT THE N-TERMINUS.
Solved by: X-RAY, Resolution: 1.78A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

336-572

4atmA

15%

3dyu: CRYSTAL STRUCTURE OF SNX9PX-BAR (230-595), H32
Solved by: X-RAY, Resolution: 4.10A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

131-566	3dyuB	14%	>target ----------SRSPSSLSSDYIKITVSNPQKEQEATNSMIPGGSTYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESY-RGFCIPPRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLVAHPVIRNSDELKVFLQAQGKLPLATSTDVASRMLDGAVKLPKQLFGEGGGASSVEVVQPGRGGRDFLRMFKELRQSVSNDWGGSKPPVVEEDKEFLEKKEKMYDLEQQIINASQQAESLVKAQ-QDMGETMGELGLAFIKLTKFENEEAVFNSQRARANDMKNLATSAVKASRFYRELNSQTVK-HLDTLHDYLGLMMAVQGAFADRSSALLTVQTLLSELSSLEARAEKLEVASSKVFGGDKSRIKKIEELKETIKVTEDSKNVAIREYEQIKENNWSEVERLDRERRADFLNMMKGFVANQVGYAEKIANVWTKVAEETRQ- >3dyuB EKIPIIVGDYGPMWVYPT-STFDCVVADPRKGSKMY-----GLKSYIEYQLTPTNT-------NRSVNHRYKHFDWLYERLLVKFGSAIPIPSLPDKQVTG---RFEEEFIKMRMERLQAWMTRMCRHPVISESEVFQQFLNFRDEKEWKTGKRKAERDE---------LA-----------------GV---MIFSTMEPE------APDLDLVEIEQKCEAVGKFTKAMDDGVKELLTVGQEHWKRCTGPLPKEYQKIGKALQSLATVFSSSGYQ-GETDLNDAITEAGKTYEEIASLVAEQPKKDLHFLMECNHEYKGFLGCFPDIIGTHKGAIEKVKESDK--------------------------------LVATSKITLQDKQNMVKRVSIMSYALQAEMNHFHSNRIYDYNSVIRLYLEQQVQFYETIAEKLRQALSRFPVM [Model]
131-566	3dyuA	14%	>target ----------SRSPSSLSSDYIKITVSNPQKEQEATNSMIPGGSTYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESY-RGFCIPPRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLVAHPVIRNSDELKVFLQAQGKLPLATSTDVASRMLDGAVKLPKQLFGEGGGASSVEVVQPGRGGRDFLRMFKELRQSVSNDWGGSKPPVVEEDKEFLEKKEKMYDLEQQIINASQQAESLVKAQ-QDMGETMGELGLAFIKLTKFENEEAVFNSQRARANDMKNLATSAVKASRFYRELNSQTVK-HLDTLHDYLGLMMAVQGAFADRSSALLTVQTLLSELSSLEARAEKLEVASSKVFGGDKSRIKKIEELKETIKVTEDSKNVAIREYEQIKENNWSEVERLDRERRADFLNMMKGFVANQVGYAEKIANVWTKVAEETRQ- >3dyuA EKIPIIVGDYGPMWVYPT-STFDCVVADPRKGSKMY-----GLKSYIEYQLTPTNT-------NRSVNHRYKHFDWLYERLLVKFGSAIPIPSLPDKQVTG---RFEEEFIKMRMERLQAWMTRMCRHPVISESEVFQQFLNFRDEKEWKTGKRKAERDE---------LA-----------------GV---MIFSTMEPE------APDLDLVEIEQKCEAVGKFTKAMDDGVKELLTVGQEHWKRCTGPLPKEYQKIGKALQSLATVFSSSGYQ-GETDLNDAITEAGKTYEEIASLVAEQPKKDLHFLMECNHEYKGFLGCFPDIIGTHKGAIEKVKESDK--------------------------------LVATSKITLQDKQNMVKRVSIMSYALQAEMNHFHSNRIYDYNSVIRLYLEQQVQFYETIAEKLRQALSRFPVM [Model]
131-566	3dyuC	14%	>target ----------SRSPSSLSSDYIKITVSNPQKEQEATNSMIPGGSTYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESY-RGFCIPPRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLVAHPVIRNSDELKVFLQAQGKLPLATSTDVASRMLDGAVKLPKQLFGEGGGASSVEVVQPGRGGRDFLRMFKELRQSVSNDWGGSKPPVVEEDKEFLEKKEKMYDLEQQIINASQQAESLVKAQ-QDMGETMGELGLAFIKLTKFENEEAVFNSQRARANDMKNLATSAVKASRFYRELNSQTVK-HLDTLHDYLGLMMAVQGAFADRSSALLTVQTLLSELSSLEARAEKLEVASSKVFGGDKSRIKKIEELKETIKVTEDSKNVAIREYEQIKENNWSEVERLDRERRADFLNMMKGFVANQVGYAEKIANVWTKVAEETRQ- >3dyuC EKIPIIVGDYGPMWVYPT-STFDCVVADPRKGSKMY-----GLKSYIEYQLTPTNT-------NRSVNHRYKHFDWLYERLLVKFGSAIPIPSLPDKQVTG---RFEEEFIKMRMERLQAWMTRMCRHPVISESEVFQQFLNFRDEKEWKTGKRKAERDE---------LA-----------------GV---MIFSTMEPE------APDLDLVEIEQKCEAVGKFTKAMDDGVKELLTVGQEHWKRCTGPLPKEYQKIGKALQSLATVFSSSGYQ-GETDLNDAITEAGKTYEEIASLVAEQPKKDLHFLMECNHEYKGFLGCFPDIIGTHKGAIEKVKESDK--------------------------------LVATSKITLQDKQNMVKRVSIMSYALQAEMNHFHSNRIYDYNSVIRLYLEQQVQFYETIAEKLRQALSRFPVM [Model]

3dyt: CRYSTAL STRUCTURE OF SNX9PX-BAR (230-595), C2221
Solved by: X-RAY, Resolution: 2.08A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

131-566

3dytA

14%

[Model]

2rea: CRYSTAL STRUCTURES OF C2ALPHA-PI3 KINASE PX-DOMAIN DOMAIN INDICATE CONFORMATIONAL CHANGE ASSOCIATED WITH LIGAND BINDING.
Solved by: X-RAY, Resolution: 2.50A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

140-263

2reaA

14%

2raj: SO4 BOUND PX-BAR MEMBRANE REMODELING UNIT OF SORTING NEXIN
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

129-566

2rajA

14%

[Model]

4akv: CRYSTAL STRUCTURE OF HUMAN SORTING NEXIN 33 (SNX33)
Solved by: X-RAY, Resolution: 2.65A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	165-565	4akvA	14%	>target -------------------------TYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESYRGFCIPPRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLVAHPVIRNSDELKVFLQAQGKLPLATSTDVASRMLDGAVKLPKQLFGEGGGASSVEVVQPGRGGRDFLRMFKELRQSVSNDWGGSKPPVVEEDKEFLEKKEKMYDLEQQIINASQQAESLVKAQ-QDMGETMGELGLAFIKLTKFENEEAVFNSQRARANDMKNLATSAVKASRFYRELNSQ-TVKHLDTLHDYLGLMMAVQGAFADRSSALLTVQTLLSELSSLEARAEKLEVASSKVFGGDKSRIKKIEELKETIKVTEDSKNVAIREYEQIKENNWSEVERLDRERRADFLNMMKGFVANQVGYAEKIANVWTKVAEETR- >4akvA MYSIEMGPRGPQWKANPHPFACSVEDPISYKLTPTHA-------ASPVYRRYKHFDWLYNRLLHKFTVISVPHLPEKQ---------EDFIEKRKRRLILWMDHMTSHPVLSQYEGFQHFLSCLDDKQWKMGKRRAE---------KDEMVGA-----------------SFLLTFQI---------PTEHQDLQDVEDRVDTFKAFSKKMDDSVLQLSTVASELVRKHVGGFRKEFQKLGSAFQAISHSFQMD-PPFCSEALNSAISHTGRTYEAIGEMFAEQPKNDLFQMLDTLSLYQGLLSNFPDIIHLQKGAFAKVKESQ--------------------------------RMSDEGRMVQDEADGIRRRCRVVGFALQAEMNHFHQRRELDFKHMMQNYLRQQILFYQRVGQQLEKTLRMYDN [Model]
	165-565	4akvB	14%	>target ------------------------------TYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESYRGFCIPPRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLVAHPVIRNSDELKVFLQAQGKLPLATSTDVASRMLDGAVKLPKQLFGEGGGASSVEVVQPGRGGRDFLRMFKELRQSVSNDWGGSKPPVVEEDKEFLEKKEKMYDLEQQIINASQQAESLVKA-QQDMGETMGELGLAFIKLTKFENEEAVFNSQRARANDMKNLATSAVKASRFYRELNSQ-TVKHLDTLHDYLGLMMAVQGAFADRSSALLTVQTLLSELSSLEARAEKLEVASSKVFGGDKSRIKKIEELKETIKVTEDSKNVAIREYEQIKENNWSEVERLDRERRADFLNMMKGFVANQVGYAEKIANVWTKVAEETR- >4akvB YFQSMYSIEMGPRGPQWKANPHPFACSVEDSYISYKLTPTHA-------ASPVYRRYKHFDWLYNRLLHKFTVISVPHLPEKQ----------DFIEKRKRRLILWMDHMTSHPVLSQYEGFQHFLSCLDDKQWKMGKRRAE---------KDEMV-----------------GASFLLTFQI---------PTEHQDLQDVEDRVDTFKAFSKKMDDSVLQLSTVASELVRKHVGGFRKEFQKLGSAFQAISHSFQMD-PPFCSEALNSAISHTGRTYEAIGEMFAEQPKNDLFQMLDTLSLYQGLLSNFPDIIHLQKGAFAKVKES--------------------------------QRMSDEGRMVQDEADGIRRRCRVVGFALQAEMNHFHQRRELDFKHMMQNYLRQQILFYQRVGQQLEKTLRMYDN [Model]

2iwl: STRUCTURE OF THE PX DOMAIN OF PHOSPHOINOSITIDE 3-KINASE- C2ALPHA
Solved by: X-RAY, Resolution: 2.60A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

141-262

2iwlX

14%

2wwe: CRYSTAL STRUCTURE OF THE PHOX HOMOLOGY DOMAIN OF HUMAN PHOSPHOINOSITIDE-3-KINASE-C2-GAMMA
Solved by: X-RAY, Resolution: 1.25A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

164-262

2wweA

14%

2rak: PI(3)P BOUND PX-BAR MEMBRANE REMODELING UNIT OF SORTING NEXIN 9
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

129-566

2rakA

14%

[Model]

2ar5: CRYSTAL STRUCTURE OF THE MAMMALIAN C2ALPHA-PI3 KINASE PX- DOMAIN
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

140-263

2ar5A

14%

2red: CRYSTAL STRUCTURES OF C2ALPHA-PI3 KINASE PX-DOMAIN DOMAIN INDICATE CONFORMATIONAL CHANGE ASSOCIATED WITH LIGAND BINDING.
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

140-263

2redA

14%

2czo: SOLUTION STRUCTURE OF THE PX DOMAIN OF BEM1P
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

165-264

2czoA

13%

2v6v: THE STRUCTURE OF THE BEM1P PX DOMAIN
Solved by: X-RAY, Resolution: 1.5A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	166-264	2v6vA	12%	>target ---------------------YITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESYR--------------GFCIPPRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLVAH-PVIRNSDELKVFLQAQG--------- >2v6vA KLVDGELLVKASVESFGLEDEKYWFLVCCELS----NGKTRQLKRYYQDFYDLQVQLLDAFPAEAGKLRDAGGQWSKRIMPYIPGPVPYV-----TNSITKKRKEDLNIYVADLVNLPDYISRSEMVHSLFVVLNNGFDREFER [Model]
	166-264	2v6vB	12%	>target ----------------------YITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESYR-------------GFCIPPRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLVA-HPVIRNSDELKVFLQAQG--------- >2v6vB AKLVDGELLVKASVESFGLEDEKYWFLVCCELS----NGKTRQLKRYYQDFYDLQVQLLDAFPAEAGKLRDGGQWSKRIMPYIPGPVPY-----VTNSITKKRKEDLNIYVADLVNLPDYISRSEMVHSLFVVLNNGFDREFER [Model]

1x03: CRYSTAL STRUCTURE OF ENDOPHILIN BAR DOMAIN
Solved by: X-RAY, Resolution: 3.10A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

336-571

1x03A

10%

1x04: CRYSTAL STRUCTURE OF ENDOPHILIN BAR DOMAIN (MUTANT)
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

335-571

1x04A

10%

2d4c: CRYSTAL STRUCTURE OF THE ENDOPHILIN BAR DOMAIN MUTANT
Solved by: X-RAY, Resolution: 2.40A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

334-571	2d4cB	10%	>target ------------------VEEDKEFLEKKEKMYDLEQQIINASQQAESLVKAQ----------QDMGETMGELGLAFIKLTKFENEEAVFNSQRARANDMKNLATSAVKASRFYRELNSQ-TVKHLDTLHDYLGLMMAVQGAFADRSSALLTVQTLLSELSSLEARAEKLEVASSKVFGGDKSRIKKIEELKETIKVTEDSKNVAIREYEQIKENNWSEVERLDRERRADFLNMMKGFVANQVGYAEKIANVWTKVAEETRQYDRES >2d4cB QFHKATQKVSEKVGGAEGTKLDDDFKEMERKVDVTSRAVMEIMTKTIEYLQPNPASRAKLSMIPGYPQAEALLAEAMLKFGRELGDD------CNFGPALGEVGEAMRELSEVKDSLDIEVKQNFIDPLQNLHD--KDLREIQSALQHHLKKLEGRRLDFDYKKKRQG------------------K---------IPDEELRQALEKFDESKEIAESSMFNLLE-MDIEQVSQLSALVQAQLEYHKQAVQILQQVTVRLEERIRQA [Model]
334-571	2d4cA	10%	>target ----------------VEEDKEFLEKKEKMYDLEQQIINASQQAESLVKA-----QQDMGETMGELGLAFIKLTKFENEEAVFNSQRARANDMKNLATSAVKASRFYRELNSQ-TVKHLDTLHDYLG-LMMAVQGAFADRSSALLTVQTLLSELSSLEARAEKLEVASSKVFGGDKSRIKKIEELKETIKVTEDSKNVAIREYEQIKENNWSEVERLDRERRADFLNMMKGFVANQVGYAEKIANVWTKVAEETRQYDRES >2d4cA HKATQKVSEKVGGAEGTKLDDDFKEMERKVDVTSRAVMEIMTKTIEYLQPNPASRAKLYPQAEALLAEAMLKFGRELGDD------CNFGPALGEVGEAMRELSEVKDSLDIEVKQNFIDPLQNLHDKDLREIQSALQHHL---KKLEGRRLDFDYKKKRQ------------------G---------KIPDEELRQALEKFDESKEIAESSMFNLLEM-DIEQVSQLSALVQAQLEYHKQAVQILQQVTVRLEERIRQA [Model]
334-571	2d4cC	10%	>target ----------------VEEDKEFLEKKEKMYDLEQQIINASQQAESLVKA-------QQDMGETMGELGLAFIKLTKFENEEAVFNSQRARANDMKNLATSAVKASRFYRELNSQ-TVKHLDTLHDYLGLMMAVQGAFADRSSALLTVQTLLSELSSLEARAEKLEVASSKVFGGDKSRIKKIEELKETIKVTEDSKNVAIREYEQIKENNWSEVERLDRERRADFLNMMKGFVANQVGYAEKIANVWTKVAEETRQYDRES >2d4cC HKATQKVSEKVGGAEGTKLDDDFKEMERKVDVTSRAVMEIMTKTIEYLQPNPASRAKLPGYPQAEALLAEAMLKFGRELGDDC------NFGPALGEVGEAMRELSEVKDSLDIEVKQNFIDPLQNLHDK--DLREIQSALQHHLKKLEGRRLDFDYKKKR------------------QGK---------IPDEELRQALEKFDESKEIAESSMFNLLEMD-IEQVSQLSALVQAQLEYHKQAVQILQQVTVRLEERIRQA [Model]
336-571	2d4cD	10%	>target -----------------EDKEFLEKKEKMYDLEQQIINASQQAESLVKAQQD-------MGETMGELGLAFIKLTKFENEEAVFNSQRARANDMKNLATSAVKASRFYRELNSQ-TVKHLDTLHDYLGLMMAVQGAFADRSSALLTVQTLLSELSSLEARAEKLEVASSKVFGGDKSRIKKIEELKETIKVTEDSKNVAIREYEQIKENNWSEVERLDRERRADFLNMMKGFVANQVGYAEKIANVWTKVAEETRQYDRES >2d4cD KATQKVSEKVGGAEGTKLDDDFKEMERKVDVTSRAVMEIMTKTIEYLQPNPASRAKLSMYPQAEALLAEAMLKFGRELGDDC------NFGPALGEVGEAMRELSEVKDSLDIEVKQNFIDPLQNLHDK--DLREIQSAL-------QHHLKKLEGRRLD----------------------------FDIPDEELRQALEKFDESKEIAESSMFNLL-EMDIEQVSQLSALVQAQLEYHKQAVQILQQVTVRLEERIRQA [Model]

4i1q: CRYSTAL STRUCTURE OF HBRAP1 N-BAR DOMAIN
Solved by: X-RAY, Resolution: 2.53A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	337-566	4i1qA	11%	>target -DKEFLEKKEKMYDLEQQIINASQQAESLVKAQQDMGETMGELGLAFIKLTKFENEEAVFNSQRARANDMKNLATSAVKASRFYRELNSQTVKHLDTLHDYLGLMMAVQGAFADRSSALLTVQTLLSELSSLEARAEKLEVASSKVFGGDKSRIKKIEELKETIKVTEDSKNVAIREYEQIKENNWSEVERLDRERRADFLNMMKGFVANQVGYAEKIANVWTKVAEETRQ- >4i1qA KDERFEQSANNFYQQQAEGHKLYKDLKNFLSAVKVMHESSKRVSETLQEIYSSEWD--GH-------EELKAIVWNNDLLWEDYEE--KLADQAVRTMEIYVAQFSEIKERIAKRGRKLVDYDSARHHLEAVQNA-------KKK--------------DEAKTAKAEEEFNKAQTVFEDLNQELLEELPILYNSRIGCYVTIFQNISNLRDVFYREMSKLNHNLYEVMSKL [Model]
	339-566	4i1qB	10%	>target -EFLEKKEKMYDLEQQIINASQQAESLVKAQQDMGETMGELGLAFIKLTKFENEEAVFNSQRARANDMKNLATSAVKASRFYRELNSQ-TVKHLDTLHDYLGLMMAVQGAFADRSSALLTVQTLLSELSSLEARAEKLEVASSKVFGGDKSRIKKIEELKETIKVTEDSKNVAIREYEQIKENNWSEVERLDRERRADFLNMMKGFVANQVGYAEKIANVWTKVAEETRQ- >4i1qB ERFEQSANNFYQQQAEGHKLYKDLKNFLSAVKVMHESSKRVSETLQEIYSSEWDG--H-------EELKAIVW---NNDLLWEDYEEKLADQAVRTMEIYVAQFSEIKERIAKRGRKLVDYDSARHHLEAVQN-------AKK--------------KDEAKTAKAEEEFNKAQTVFEDLNQELLEELPILYNSRIGCYVTIFQNISNLRDVFYREMSKLNHNLYEVMSKL [Model]

2rai: THE PX-BAR MEMBRANE REMODELING UNIT OF SORTING NEXIN 9
Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

131-564	2raiB	14%	>target --------------------------SRSPSSLSSDYIKITVSNPQKEQEATNSMIPGGSTYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESY-RGFCIPPRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLVAHPVIRNSDELKVFLQAQGKLPLATSTDVASRMLDGAVKLPKQLFGEGGGASSVEVVQPGRGGRDFLRMFKELRQSVSNDWGGSKPPVVEEDKEFLEKKEKMYDLEQQIINASQQAESLVKAQ-QDMGETMGELGLAFIKLTKFENEEAVFNSQRARANDMKNLATSAVKASRFYRELNSQTVK-HLDTLHDYLGLMMAVQGAFADRSSALLTVQTLLSELSSLEARAEKLEVASSKVFGGDKSRIKKIEELKETIKVTEDSKNVAIREYEQIKENNWSEVERLDRERRADFLNMMKGFVANQVGYAEKIANVWTKVAEET--- >2raiB PGTEQYLLAKQLAKPKEKIPIIVGDYGPMWVYPTST-FDCVVADP---------------SYIEYQLTPTNT-------NRSVNHRYKHFDWLYERLLVKFGSAIPIPSLPDKQV-------TGEFIKMRMERLQAWMTRMCRHPVISESEVFQQFLNFRDEKEWKTGKRKAERD---------ELAGVM--------------------IFSTMEPE------APDLDLVEIEQKCEAVGKFTKAMDDGVKELLTVGQEHWKRCTGPLPKEYQKIGKALQSLATVFSSSG-YQGETDLNDAITEAGKTYEEIASLVAEQPKKDLHFLMECNHEYKGFLGCFPDIIGTHKGAIEKVKESDKLVA--------------------------------TSKITLQDKQNMVKRVSIMSYALQAEMNHFHSNRIYDYNSVIRLYLEQQVQFYETIAEKLRQALSRFPVM [Model]
131-565	2raiA	14%	>target --------------------------SRSPSSLSSDYIKITVSNPQKEQEATNSMIPGGSTYITYQITTRTNLSDYGGSEFSVRRRFRDIVTLADRLAESY-RGFCIPPRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLVAHPVIRNSDELKVFLQAQGKLPLATSTDVASRMLDGAVKLPKQLFGEGGGASSVEVVQPGRGGRDFLRMFKELRQSVSNDWGGSKPPVVEEDKEFLEKKEKMYDLEQQIINASQQAESLVK--------AQQDMGETMGELGLAFIKLTKFENEEAVFNSQRARANDMKNLATSAVKASRFYRELNSQTVK-HLDTLHDYLGLMMAVQGAFADRSSALLTVQTLLSELSSLEARAEKLEVASSKVFGGDKSRIKKIEELKETIKVTEDSKNVAIREYEQIKENNWSEVERLDRERRADFLNMMKGFVANQVGYAEKIANVWTKVAEETR-- >2raiA PGTEQYLLAKQLAKPKEKIPIIVGDYGPMWVYPTST-FDCVVADP---------------SYIEYQLTPTN-------TNRSVNHRYKHFDWLYERLLVKFGSAIPIPSLPEE------------FIKMRMERLQAWMTRMCRHPVISESEVFQQFLNFRDEKEWKTGKRKAER---------DELAGVM--------------------IFSTMEPEA------PDLDLVEIEQKCEAVGKFTKAMDDGVKELLTVGQEHWKRCTGPLPKEYQKIGKALQSLATVFSSSGYQG--------ETDLNDAITEAGKTYEEIASLVAEQPKKDLHFLMECNHEYKGFLGCFPDIIGTHKGAIEKVKESD-----------KL---------------------VATSKITLQDKQNMVKRVSIMSYALQAEMNHFHSNRIYDYNSVIRLYLEQQVQFYETIAEKLRQALSRFPVM [Model]
339-543	2raiB	10%	>target ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EFLEKKEKMYDLEQQIINASQ-QAESLVKAQQDMGETMGELGLAFIKLTKFENEEAVFNSQRARANDMKNLATSAVKASRF-YRELNSQTVKHLDTLHDYLGLMMAVQGAFADRSSALLTVQTLLS---ELSSLEARAEKLEVASSKVFGGDKSRIKKIEELKETIKVTEDSKNVAIREYEQIKENNWSEVERLDRERRADFLNMMKGFV-- >2raiB PGTEQYLLAKQLAKPKEKIPIIVGDYGPMWVYPTSTFDCVVADPSYIEYQLTPTNTNRSVNHRYKHFDWLYERLLVKFGSAIPIPSLPDKQVTGEFIKMRMERLQAWMTRMCRHPVISESEVFQQFLNFRDEKEWKTGKRKAERDELAGVMIFSTMEPEAPDLDLVEIEQKCEAVGKFTKAMDDGVKELLTVGQEHWKRCTGPLPKEYQKIGKALQSLATVFSSSGYQG-ETDLNDAITEAGKTYEEIASLVAEQPKKDLHFLMECNHEYKGFLGCFPDIIGTHKGAIEKVKESDKLVATSKITLQDKQNMVKRVSIMS-----------------YALQAEMNHFHSN---RIYDYNSVIRLYLEQQVQFYETIAEKLRQALSRFPVM [Model]

1uru: AMPHIPHYSIN BAR DOMAIN FROM DROSOPHILA
Solved by: X-RAY, Resolution: 2.60A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

336-570

1uruA

10%

4avm: CRYSTAL STRUCTURE OF THE N-BAR DOMAIN OF HUMAN BRIDGING INTEGRATOR 2.
Solved by: X-RAY, Resolution: 1.91A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

313-571

4avmA

10%

2fic: THE CRYSTAL STRUCTURE OF THE BAR DOMAIN FROM HUMAN BIN1/AMPHIPHYSIN II AND ITS IMPLICATIONS FOR MOLECULAR RECOGNITION
Solved by: X-RAY, Resolution: 1.99A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	337-564	2ficB	11%	>target -DKEFLEKKEKMYDLEQQIINASQQAESLVKAQQDMGETMGELGLAFIKLTKFENEEAVFNSQRARANDMKNLATSAVKASRFYRELNSQTVKHLDTLHDYLGLMMAVQGAFADRSSALLTVQTLLSELSSLEARAEKLEVASSKVFGGDKSRIKKIEELKETIKVTEDSKNVAIREYEQIKENNWSEVERLDRERRADFLNMMKGFVANQVGYAEKIANVWTKVAEET---- >2ficB KDEQFEQCVQNFNKQLTEGTRLQKDLRTYLASVKAMHEASKKLNECLQEVYEP--DWPGRD---EANKIAENNDL---LWMDYHQKL---VDQALLTMDTYLGQFPDIKSRIAKRGRKLVDYDSARHHYESLQTA-------KKK--------------DEAKIAKAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVLVGLE [Model]
	339-564	2ficA	10%	>target -EFLEKKEKMYDLEQQIINASQQAESLVKAQQDMGETMGELGLAFIKLTKFENEEAVFNSQRARANDMKNLATSAVKASRFYRELNS-QTVKHLDTLHDYLGLMMAVQGAFADRSSALLTVQTLLSELSSLEARAEKLEVASSKVFGGDKSRIKKIEELKETIKVTEDSKNVAIREYEQIKENNWSEVERLDRERRADFLNMMKGFVANQVGYAEKIANVWTKVAEET--- >2ficA EQFEQCVQNFNKQLTEGTRLQKDLRTYLASVKAMHEASKKLNECLQEVYE--PDWPGRD---EANKIA-------ENNDLLWMDYHQKLVDQALLTMDTYLGQFPDIKSRIAKRGRKLVDYDSARHHYESLQ----------------------------TKIAKAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSKLNQNLNDVLVGL [Model]

2c08: RAT ENDOPHILIN A1 BAR DOMAIN
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

336-571

2c08A

10%

1zww: CRYSTAL STRUCTURE OF ENDOPHILIN-A1 BAR DOMAIN
Solved by: X-RAY, Resolution: 2.30A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	336-570	1zwwA	11%	>target --EDKEFLEKKEKMYDLEQQIINASQQAESLVKAQQD-MGETMGELGLAFIKLTKFENEEAVFNSQRARANDMKNLATSAVKASRFYRELNSQT-VKHLDTLHDYLG-LMMAVQGAFADRSSALLTVQTLLSELSSLEARAEKLEVASSKVFGGDKSRIKKIEELKETIKVTEDSKNVAIREYEQIKENNWSEVERLDRERRADFLNMMKGFVANQVGYAEKIANVWTKVAEETRQYDRE >1zwwA TKLDDDFKEMERKVDVTSRAVMEIMTKTIEYLQPNPASRPQAEALLAEAMLKFGRELGDDC------NFGPALGEVGEAMRELSEVKDSLDMEVKQNFIDPLQNLHDKDLREIQHHLKKLEGRRLDFGYK-------KKRQGK--------------------IPDEELRQ-------ALEKFDESKEIAESSMFNLLE-MDIEQVSQLSALVQAQLEYHKQAVQILQQVTVRLEERIRQ [Model]
	337-570	1zwwB	10%	>target --DKEFLEKKEKMYDLEQQIINASQQAESLVKA---QQDMGETMGELGLAFIKLTKFENEEAVFNSQRARANDMKNLATSAVKASRFYRELNSQ-TVKHLDTLHDYLG-LMMAVQGAFADRSSALLTVQTLLSELSSLEARAEKLEVASSKVFGGDKSRIKKIEELKETIKVTEDSKNVAIREYEQIKENNWSEVERLDRERRADFLNMMKGFVANQVGYAEKIANVWTKVAEETRQYDRE- >1zwwB KLDDDFKEMERKVDVTSRAVMEIMTKTIEYLQPNPASRAKPQAEALLAEAMLKFGRELGDD------CNFGPALGEVGEAMRELSEVKDSLDMEVKQNFIDPLQNLHDKDLREIQH---HLKK-----------LEGRRLDFGYKK-----------KR-------DEELRQALEK-------FDESKEIAESSMFNLLE-MDIEQVSQLSALVQAQLEYHKQAVQILQQVTVRLEERIRQA [Model]

Downloads

download model.tgz

Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.