SWISS-MODEL Repository - Model Details

Model Overview
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Sequence
UniProt O00522
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

STRING
O00522: 9606.ENSP0000034

Domain
Link to: [ InterPro ]
Ank
FERM_M
Ank_2

Model 3D Structure
Model information:
Modelled residue range: 420 to 730
Based on template: [ 3u7d ]  
Sequence Identity [%]: 98%
Model date: 2013-04-22
Revision date: 2013-04-01

Quaternary structure information: [details]
Template (3u7d): MONOMER
Model: MONOMER

Ligand information: [details]
Ligands in the template: none.
Ligands in the model: none.
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

Alignment 

TARGET    1       EKVRIYRM DGSYRSVELK HGNNTTVQQI MEGMRLSQET QQYFTIWICS
3u7d_1#4  420     ekvriyrm dgsyrsvelk hgnnttvqqi megmrlsqet qqyftiwics
                                                                      
TARGET            sssssss    sssssss        hhhh hhh    hhh hhssssssss
3u7d_1#4          sssssss    sssssss        hhhh hhh    hh    ssssssss


TARGET    49    ENLSLQLKPY HKPLQHVRDW PEILAELTNL DPQRETPQLF LRRDVRLPLE
3u7d_1#4  468   enlslqlkpy hkplqhvrdw peilaeltnl dpqretpqlf lrrdvrlple
                                                                      
TARGET            sssss      hhhhh    hhhhhh            sss ssss    hh
3u7d_1#4          sssss       hhhh    hhhhhhh           sss ssss    hh


TARGET    99    VEKQIEDPLA ILILFDEARY NLLKGFYTAP DAKLITLASL LLQIVYGNYE
3u7d_1#4  518   vekqiedpla ililfdeary nllkgfytap daklitlasl llqivygnye
                                                                      
TARGET          hhh    hhh hhhhhhhhhh hhhh       hhhhhhhhhh hhhhh     
3u7d_1#4        hhh    hhh hhhhhhhhhh hhh        hhhhhhhhhh hhhhh     


TARGET    149   SKKHKQGFLN EENLKSIVPV TKLKSKAPHW TNRILHEYKN LSTSEGVSKE
3u7d_1#4  568   skkhkqgfln eenlksivpv tklkskaphw tnrilheykn lstsegvske
                                                                      
TARGET                        hh            h    hhhhhhhhhh hhh       
3u7d_1#4                      hh            h    hhhhhhhhhh hhh       


TARGET    199   MHHLQRMFLQ NCWEIPTYGA AFFTGQIFTK ASPSNHKVIP VYVGVNIKGL
3u7d_1#4  618   mhhlqrmflq ncweiptyga afftgqift- -----hkvip vyvgvnikgl
                                                                      
TARGET           hhhhhhhhh hhh        sssssssss        ssss ssssss sss
3u7d_1#4        hhhhhhhhhh hhh        sssssssss        ssss ssssss sss


TARGET    249   HLLNMETKAL LISLKYGCFM WQLGDTDTCF QIHSMENKMS FIVHTKQAGL
3u7d_1#4  668   hllnmetkal lislkygcfm wqlgdtdtcf qihsmenkms fivhtkqagl
                                                                      
TARGET          sssss   ss ssssss sss ssss   sss sssss   ss sssss hhhh
3u7d_1#4        sssss   ss ssssss sss ssss   sss sssss   ss sssss hhhh


TARGET    299   VVKLLMKLNG QLM                                        
3u7d_1#4  718   vvkllmklng qlm-                                       
                                                                      
TARGET          hhhhhhhhhh                                            
3u7d_1#4        hhhhhhhhhh

Quality 


Template's ligands section 
Template without ligands. 
No ligands were included in the model.

 
Quaternary Structure Annotation of the Template 
 3u7d is annotated as MONOMER 
 The oligomeric state of the structure was assigned by the authors of the corresponding PDB entry 
 The following biological unit was used to build the template structure: 3u7d.pdb1.gz 
      
 
Quaternary Structure Modelling of the Target Protein 
 Analysis of evolutionary and family specific aspects revealed conservation of the oligomeric structure 
 Hence, the oligomeric structures of the target and the template can be assumed to be similar (=MONOMER) 
 The corresponding reliability score is 0.866 (>0.5 indicates similarity) 
 Model was succesfully built as MONOMER.

Template Selection 
 - Start SMR-Pipeline for:9031a185600bbacf07c374dfb862b655 on BC2-cluster at Mon Apr 22 15:01:46
2013 


 - Analyze BLAST summary ... 
 - Blast template search was successfull, number of templates selected for modeling:  2
 - But still uncovered regions of the target sequence detected, go for: HHSEARCH

 - No A3m found

 - Run HHSearch to detect more templates...
 - Generate new template library
 - Run template selection against modfied template library 
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 - No template with A found
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 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with C found
 - No template with D found
 - No template with C found
 - No template with A found
 - No template with C found
 - No template with A found
 - No template with C found
 - No template with A found
 - No template with C found
 - No template with A found
 - No template with C found
 - No template with A found
 - No template with C found
 - No template with A found
 - No template with A found
 - No template with C found
 - No template with C found
 - No template with A found
 - No template with C found
 - No template with A found
 - No template with A found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with D found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with E found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with B found
 - No template with C found
 - No template with E found
 - No template with F found
 - No template with B found
 - No template with C found
 - No template with E found
 - No template with F found
 - No template with E found
 - No template with F found
 - No template with B found
 - No template with C found
 - No template with B found
 - No template with C found
 - No template with E found
 - No template with F found
 - No template with B found
 - No template with C found
 - No template with E found
 - No template with F found
 - No template with B found
 - No template with C found
 - No template with E found
 - No template with F found
 - No template with B found
 - No template with C found
 - No template with E found
 - No template with F found
 - No template with E found
 - No template with F found
 - No template with B found
 - No template with C found
 - No template with E found
 - No template with F found
 - No template with B found
 - No template with C found
 - No template with E found
 - No template with F found
 - No template with B found
 - No template with C found
 - No template with E found
 - No template with F found
 - No template with B found
 - No template with C found
 - No template with E found
 - No template with F found
 - No template with B found
 - No template with C found
 - No template with B found
 - No template with C found
 - No template with E found
 - No template with F found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with D found
 - No template with E found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with F found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with B found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with B found
 - No template with A found
 - No template with B found
 - No template with A found
 - No template with D found
 - No template with E found
 - Proof template(s) selection compared to previous Repository update
 - Different number of templates selected (old0 vs new:17): model based on new templates
 - Send 17 Templates for modeling

 - @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@
 -                                               **********************************
 - building model based on 3u7dA (420-730) was successful 
 -  *********************
 - building model based on 4dx8H (8-197) was successful 
 -                                 ******
 - building model based on 1s70B (292-342) was successful 
 -                                 *************
 - building model based on 4hb5B (291-413) was successful 
 -                                    **************
 - building model based on 2xzdG (320-447) was successful 
 -                                *****************
 - building model based on 2j8sE (289-445) was successful 
 -                        **********************
 - Oligomeric modeling of 2bkgB was not successful, fall back to monomeric modeling
 - building model based on 2bkgB (210-411) was not successful go to next best template
 -                        **********************
 - Oligomeric modeling of 2bkgA was not successful, fall back to monomeric modeling
 - building model based on 2bkgA (210-411) was not successful go to next best template
 -                        **********************
 - building model based on 3zu7B (211-412) was successful 
 -                     *********************
 - building model based on 2xehC (181-377) was successful 
 -                        **************************
 - building model based on 3d9hA (207-443) was successful 
 -                  ************************
 - building model based on 3q9nC (154-374) was successful 
 -               ************
 - building model based on 3nogE (130-238) was successful 
 -               ************************
 - building model based on 2y1lF (126-342) was successful 
 -      *******************
 - building model based on 2qyjA (50-228) was not successful go to next best template
 -      ********************
 - building model based on 4f6rD (48-230) was not successful go to next best template
 -       *******************
 - building model based on 4atzF (51-228) was not successful go to next best template
 -      *******************
 - building model based on 4atzD (50-228) was successful 
 -               ****************************
 - building model based on 3zkjA (125-381) was successful 
 -          *************************
 - building model based on 4duiA (83-309) was successful 
 -      ****************************
 - building model based on 2y1lF (50-309) was successful 
 -     *********************************
 - building model based on 3d9hA (39-343) was successful 
 - Repository Pipeline parameter

   Cut-off parameters to model the target based on a BLAST target-template alignment
    Evalue :                                     0.0001
    Minimum Template size (aa) for ranking :     25
    Minimum Sequence identity :                  60

   Cut-off parameters to model the target based on a HHSearch target-template alignment
    Evalue :                                     0.0001
    Probability :                                50
    MAC :                                        0.3

   Parameters for model selection
    Minimal number of uncovered target
     residues after BLAST to run HHSEARCH :      50
    Minimal number of uncovered target
     residues to model an additional template :  25
    
 - Finish SMR-Pipeline for:9031a185600bbacf07c374dfb862b655 on BC2-cluster at Mon Apr 22 15:14:42
2013


Template Description
Match Chain SeqId

3u7d: CRYSTAL STRUCTURE OF THE KRIT1/CCM1 FERM DOMAIN IN COMPLEXHEART OF GLASS (HEG1) CYTOPLASMIC TAIL
Solved by: X-RAY, Resolution: 2.49A, Identified by BLAST
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

420-730 3u7dA 98%
[Model]
420-730 3u7dC 98%
[Model]

4dxa: CO-CRYSTAL STRUCTURE OF RAP1 IN COMPLEX WITH KRIT1
Solved by: X-RAY, Resolution: 1.95A, Identified by BLAST
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

419-729 4dxaB 97%
[Model]

4dx8: ICAP1 IN COMPLEX WITH KRIT1 N-TERMINUS
Solved by: X-RAY, Resolution: 2.54A, Identified by BLAST
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

8-197 4dx8J 63%
[Model]
12-197 4dx8I 60%
[Model]
8-197 4dx8H 84%
[Model]

2y0b: CASPASE-3 IN COMPLEX WITH AN INHIBITORY DARPIN-3.4_S76R
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

126-305 2y0bG 8%
[Model]
209-373 2y0bG 16%
[Model]
208-339 2y0bG 15%
[Model]
288-401 2y0bG 28%
[Model]
31-168 2y0bG 11%
[Model]
33-97 2y0bG 20%
[Model]
320-446 2y0bG 26%
[Model]
354-414 2y0bG 23%
[Model]
49-226 2y0bG 10%
[Model]
126-307 2y0bH 9%
[Model]
210-374 2y0bH 17%
[Model]
208-340 2y0bH 16%
[Model]
288-411 2y0bH 28%
[Model]
31-164 2y0bH 10%
[Model]
34-97 2y0bH 20%
[Model]
320-446 2y0bH 26%
[Model]
354-414 2y0bH 23%
[Model]
49-228 2y0bH 9%
[Model]

3hg0: CRYSTAL STRUCTURE OF A DARPIN IN COMPLEX WITH ORF49 FROM LACTOCOCCAL PHAGE TP901-1
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

126-309 3hg0D 10%
[Model]
183-342 3hg0D 14%
[Model]
209-376 3hg0D 16%
[Model]
288-413 3hg0D 28%
[Model]
33-97 3hg0D 17%
[Model]
320-412 3hg0D 28%
[Model]
31-144 3hg0D 12%
[Model]
354-414 3hg0D 26%
[Model]
51-230 3hg0D 10%
[Model]

3zuv: CRYSTAL STRUCTURE OF A DESIGNED SELECTED ANKYRIN REPEAT PROTEIN IN COMPLEX WITH THE PHOSPHORYLATED MAP KINASE ERK
Solved by: X-RAY, Resolution: 2.72A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

126-309 3zuvB 10%
[Model]
182-342 3zuvB 14%
[Model]
210-376 3zuvB 16%
[Model]
288-412 3zuvB 31%
[Model]
32-97 3zuvB 16%
[Model]
320-414 3zuvB 29%
[Model]
31-143 3zuvB 13%
[Model]
355-414 3zuvB 25%
[Model]
49-229 3zuvB 9%
[Model]
126-307 3zuvD 10%
[Model]
181-340 3zuvD 14%
[Model]
209-374 3zuvD 16%
[Model]
288-412 3zuvD 31%
[Model]
30-165 3zuvD 10%
[Model]
32-97 3zuvD 16%
[Model]
320-414 3zuvD 29%
[Model]
354-414 3zuvD 25%
[Model]
49-228 3zuvD 9%
[Model]

4grg: CRYSTAL STRUCTURE OF IGE COMPLEXED WITH E2_79, AN ANTI-IGE
Solved by: X-RAY, Resolution: 4.24A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

126-309 4grgA 10%
[Model]
126-309 4grgB 10%
[Model]
181-342 4grgA 14%
[Model]
181-342 4grgB 14%
[Model]
209-376 4grgA 15%
[Model]
209-376 4grgB 15%
[Model]
288-412 4grgA 29%
[Model]
288-412 4grgB 29%
[Model]
30-164 4grgA 10%
[Model]
30-164 4grgB 10%
[Model]
32-97 4grgA 15%
[Model]
32-97 4grgB 15%
[Model]
319-415 4grgA 30%
[Model]
319-415 4grgB 30%
[Model]
354-413 4grgA 25%
[Model]
354-413 4grgB 25%
[Model]
50-230 4grgA 9%
[Model]
50-230 4grgB 9%
[Model]

2bkk: CRYSTAL STRUCTURE OF AMINOGLYCOSIDE PHOSPHOTRANSFERASE APH(3')-IIIA IN COMPLEX WITH THE INHIBITOR AR_3A
Solved by: X-RAY, Resolution: 2.15A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

106-307 2bkkB 10%
[Model]
126-340 2bkkB 13%
[Model]
183-374 2bkkB 16%
[Model]
209-412 2bkkB 23%
[Model]
288-444 2bkkB 24%
[Model]
30-167 2bkkB 13%
[Model]
319-413 2bkkB 26%
[Model]
31-142 2bkkB 15%
[Model]
354-413 2bkkB 27%
[Model]
50-228 2bkkB 12%
[Model]
126-340 2bkkD 13%
[Model]
182-374 2bkkD 16%
[Model]
208-412 2bkkD 22%
[Model]
288-446 2bkkD 24%
[Model]
30-166 2bkkD 13%
[Model]
319-413 2bkkD 26%
[Model]
31-142 2bkkD 15%
[Model]
354-397 2bkkD 30%
[Model]
48-228 2bkkD 12%
[Model]
87-307 2bkkD 9%
[Model]

2xen: STRUCTURAL DETERMINANTS FOR IMPROVED THERMAL STABILITY OF DESIGNED ANKYRIN REPEAT PROTEINS WITH A REDESIGNED C- CAPPING MODULE.
Solved by: X-RAY, Resolution: 2.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

126-230 2xenA 10%
[Model]
184-310 2xenA 10%
[Model]
210-343 2xenA 14%
[Model]
288-377 2xenA 22%
[Model]
320-414 2xenA 31%
[Model]
354-415 2xenA 26%
[Model]
50-144 2xenA 12%
[Model]
90-165 2xenA 14%
[Model]

1svx: CRYSTAL STRUCTURE OF A DESIGNED SELECTED ANKYRIN REPEAT PROTEIN IN COMPLEX WITH THE MALTOSE BINDING PROTEIN
Solved by: X-RAY, Resolution: 2.24A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

106-309 1svxA 11%
[Model]
126-342 1svxA 14%
[Model]
208-376 1svxA 18%
[Model]
209-412 1svxA 21%
[Model]
288-412 1svxA 27%
[Model]
30-167 1svxA 12%
[Model]
319-412 1svxA 31%
[Model]
31-144 1svxA 14%
[Model]
354-413 1svxA 25%
[Model]
51-229 1svxA 10%
[Model]

4drx: GTP-TUBULIN IN COMPLEX WITH A DARPIN
Solved by: X-RAY, Resolution: 2.22A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

106-309 4drxF 11%
[Model]
126-342 4drxF 14%
[Model]
182-376 4drxF 16%
[Model]
209-412 4drxF 23%
[Model]
288-413 4drxF 30%
[Model]
30-167 4drxF 13%
[Model]
320-414 4drxF 29%
[Model]
31-144 4drxF 14%
[Model]
354-412 4drxF 27%
[Model]
51-229 4drxF 12%
[Model]
126-342 4drxE 14%
[Model]
207-376 4drxE 17%
[Model]
210-413 4drxE 23%
[Model]
288-414 4drxE 30%
[Model]
31-165 4drxE 12%
[Model]
31-230 4drxE 10%
[Model]
320-413 4drxE 30%
[Model]
354-412 4drxE 27%
[Model]
50-309 4drxE 10%
[Model]

2qyj: CRYSTAL STRUCTURE OF A DESIGNED FULL CONSENSUS ANKYRIN
Solved by: X-RAY, Resolution: 2.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

106-307 2qyjA 11%
[Model]
126-340 2qyjA 13%
[Model]
181-374 2qyjA 18%
[Model]
211-412 2qyjA 23%
[Model]
289-445 2qyjA 25%
[Model]
30-167 2qyjA 14%
[Model]
320-413 2qyjA 29%
[Model]
31-142 2qyjA 14%
[Model]
355-412 2qyjA 26%
[Model]
50-228 2qyjA 13%
[Model]

2j8s: DRUG EXPORT PATHWAY OF MULTIDRUG EXPORTER ACRB REVEALED BYDARPIN INHIBITORS
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

106-307 2j8sE 10%
[Model]
126-340 2j8sE 13%
[Model]
126-340 2j8sD 13%
[Model]
154-374 2j8sD 15%
[Model]
181-374 2j8sE 16%
[Model]
211-412 2j8sE 22%
[Model]
208-412 2j8sD 22%
[Model]
288-446 2j8sD 25%
[Model]
31-168 2j8sE 11%
[Model]
31-167 2j8sD 11%
[Model]
322-413 2j8sE 28%
[Model]
319-412 2j8sD 30%
[Model]
32-142 2j8sE 13%
[Model]
33-142 2j8sD 13%
[Model]
356-412 2j8sE 25%
[Model]
353-413 2j8sD 25%
[Model]
49-228 2j8sD 11%
[Model]
51-228 2j8sE 11%
[Model]
87-307 2j8sD 9%
[Model]
289-445 2j8sE 25%
[Model]

1mj0: SANK E3_5: AN ARTIFICIAL ANKYRIN REPEAT PROTEIN
Solved by: X-RAY, Resolution: 2.03A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

126-340 1mj0A 13%
[Model]
182-374 1mj0A 18%
[Model]
208-412 1mj0A 22%
[Model]
288-446 1mj0A 25%
[Model]
31-167 1mj0A 13%
[Model]
319-413 1mj0A 29%
[Model]
33-142 1mj0A 13%
[Model]
355-397 1mj0A 33%
[Model]
48-228 1mj0A 11%
[Model]
88-307 1mj0A 10%
[Model]

2p2c: INHIBITION OF CASPASE-2 BY A DESIGNED ANKYRIN REPEAT PROTEIN (DARPIN)
Solved by: X-RAY, Resolution: 3.24A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

126-340 2p2cP 13%
[Model]
126-343 2p2cQ 12%
[Model]
208-377 2p2cQ 18%
[Model]
207-374 2p2cP 18%
[Model]
208-412 2p2cP 22%
[Model]
211-413 2p2cQ 22%
[Model]
289-412 2p2cQ 29%
[Model]
288-445 2p2cP 25%
[Model]
30-167 2p2cP 13%
[Model]
31-166 2p2cQ 13%
[Model]
322-413 2p2cQ 29%
[Model]
317-412 2p2cP 30%
[Model]
33-142 2p2cP 13%
[Model]
355-413 2p2cQ 27%
[Model]
352-398 2p2cP 30%
[Model]
47-228 2p2cP 11%
[Model]
51-230 2p2cQ 11%
[Model]
84-307 2p2cP 10%
[Model]
90-310 2p2cQ 9%
[Model]
106-307 2p2cS 10%
[Model]
126-340 2p2cS 12%
[Model]
126-340 2p2cR 12%
[Model]
182-374 2p2cS 17%
[Model]
208-374 2p2cR 18%
[Model]
210-411 2p2cS 22%
[Model]
208-411 2p2cR 23%
[Model]
288-446 2p2cS 25%
[Model]
288-447 2p2cR 25%
[Model]
30-168 2p2cR 13%
[Model]
30-167 2p2cS 13%
[Model]
319-413 2p2cR 31%
[Model]
320-412 2p2cS 30%
[Model]
31-142 2p2cS 13%
[Model]
31-142 2p2cR 13%
[Model]
354-412 2p2cS 27%
[Model]
354-398 2p2cR 31%
[Model]
51-228 2p2cS 12%
[Model]
48-228 2p2cR 11%
[Model]
84-307 2p2cR 10%
[Model]
106-307 2p2cU 10%
[Model]
106-307 2p2cT 9%
[Model]
126-340 2p2cU 13%
[Model]
128-340 2p2cT 12%
[Model]
182-374 2p2cT 17%
[Model]
182-374 2p2cU 17%
[Model]
210-412 2p2cU 23%
[Model]
211-412 2p2cT 23%
[Model]
288-412 2p2cU 29%
[Model]
290-444 2p2cT 25%
[Model]
30-167 2p2cU 13%
[Model]
30-167 2p2cT 13%
[Model]
323-412 2p2cT 30%
[Model]
320-412 2p2cU 30%
[Model]
31-142 2p2cU 13%
[Model]
31-142 2p2cT 13%
[Model]
357-412 2p2cT 27%
[Model]
355-412 2p2cU 28%
[Model]
51-228 2p2cU 12%
[Model]
51-228 2p2cT 12%
[Model]

4atz: AD5 KNOB IN COMPLEX WITH A DESIGNED ANKYRIN REPEAT PROTEIN
Solved by: X-RAY, Resolution: 1.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

106-307 4atzF 10%
[Model]
106-307 4atzD 10%
[Model]
106-307 4atzE 10%
[Model]
126-340 4atzD 12%
[Model]
126-340 4atzE 12%
[Model]
126-340 4atzF 12%
[Model]
183-374 4atzD 17%
[Model]
183-374 4atzE 17%
[Model]
208-374 4atzF 17%
[Model]
210-411 4atzD 21%
[Model]
210-411 4atzE 21%
[Model]
211-412 4atzF 21%
[Model]
288-444 4atzD 24%
[Model]
288-444 4atzE 24%
[Model]
290-446 4atzF 24%
[Model]
30-167 4atzD 12%
[Model]
30-167 4atzE 12%
[Model]
31-167 4atzF 12%
[Model]
323-414 4atzF 28%
[Model]
320-414 4atzD 28%
[Model]
320-414 4atzE 28%
[Model]
31-142 4atzF 14%
[Model]
31-142 4atzD 13%
[Model]
31-142 4atzE 13%
[Model]
354-413 4atzD 27%
[Model]
354-413 4atzE 27%
[Model]
357-413 4atzF 26%
[Model]
50-228 4atzE 12%
[Model]
50-228 4atzD 12%
[Model]
51-228 4atzF 12%
[Model]

2jab: A DESIGNED ANKYRIN REPEAT PROTEIN EVOLVED TO PICOMOLAR AFFINITY TO HER2
Solved by: X-RAY, Resolution: 1.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

126-309 2jabA 11%
[Model]
183-342 2jabA 14%
[Model]
209-376 2jabA 15%
[Model]
288-413 2jabA 28%
[Model]
320-414 2jabA 27%
[Model]
31-144 2jabA 13%
[Model]
354-413 2jabA 25%
[Model]
50-167 2jabA 12%
[Model]
90-230 2jabA 11%
[Model]
126-309 2jabB 11%
[Model]
183-342 2jabB 14%
[Model]
209-376 2jabB 15%
[Model]
288-413 2jabB 28%
[Model]
320-414 2jabB 27%
[Model]
31-144 2jabB 13%
[Model]
354-413 2jabB 25%
[Model]
50-167 2jabB 12%
[Model]
90-230 2jabB 11%
[Model]
126-310 2jabC 10%
[Model]
182-343 2jabC 14%
[Model]
209-377 2jabC 15%
[Model]
288-413 2jabC 28%
[Model]
33-97 2jabC 17%
[Model]
320-413 2jabC 28%
[Model]
31-144 2jabC 13%
[Model]
354-414 2jabC 25%
[Model]
51-230 2jabC 9%
[Model]

4dx5: TRANSPORT OF DRUGS BY THE MULTIDRUG TRANSPORTER ACRB INVOLACCESS AND A DEEP BINDING POCKET THAT ARE SEPARATED BY A
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

126-340 4dx5D 13%
[Model]
128-340 4dx5E 13%
[Model]
154-374 4dx5D 15%
[Model]
182-374 4dx5E 17%
[Model]
211-412 4dx5E 22%
[Model]
208-412 4dx5D 22%
[Model]
290-448 4dx5E 26%
[Model]
288-446 4dx5D 25%
[Model]
31-167 4dx5D 11%
[Model]
31-167 4dx5E 11%
[Model]
323-412 4dx5E 29%
[Model]
319-412 4dx5D 30%
[Model]
31-142 4dx5E 13%
[Model]
33-142 4dx5D 13%
[Model]
357-412 4dx5E 25%
[Model]
353-413 4dx5D 25%
[Model]
49-228 4dx5D 11%
[Model]
51-228 4dx5E 11%
[Model]
87-307 4dx5D 9%
[Model]
91-307 4dx5E 10%
[Model]

4dx6: TRANSPORT OF DRUGS BY THE MULTIDRUG TRANSPORTER ACRB INVOLACCESS AND A DEEP BINDING POCKET THAT ARE SEPARATED BY A
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

126-340 4dx6D 13%
[Model]
128-340 4dx6E 13%
[Model]
154-374 4dx6D 15%
[Model]
182-374 4dx6E 17%
[Model]
211-412 4dx6E 22%
[Model]
208-412 4dx6D 22%
[Model]
290-448 4dx6E 26%
[Model]
288-446 4dx6D 25%
[Model]
31-167 4dx6D 11%
[Model]
31-167 4dx6E 11%
[Model]
323-412 4dx6E 29%
[Model]
319-412 4dx6D 30%
[Model]
31-142 4dx6E 13%
[Model]
33-142 4dx6D 13%
[Model]
357-412 4dx6E 25%
[Model]
353-413 4dx6D 25%
[Model]
49-228 4dx6D 11%
[Model]
51-228 4dx6E 11%
[Model]
87-307 4dx6D 9%
[Model]
91-307 4dx6E 10%
[Model]

4dx7: TRANSPORT OF DRUGS BY THE MULTIDRUG TRANSPORTER ACRB INVOLACCESS AND A DEEP BINDING POCKET THAT ARE SEPARATED BY A
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

126-340 4dx7D 13%
[Model]
128-340 4dx7E 13%
[Model]
154-374 4dx7D 15%
[Model]
182-374 4dx7E 17%
[Model]
211-412 4dx7E 22%
[Model]
208-412 4dx7D 22%
[Model]
290-448 4dx7E 26%
[Model]
288-446 4dx7D 25%
[Model]
31-167 4dx7D 11%
[Model]
31-167 4dx7E 11%
[Model]
323-412 4dx7E 29%
[Model]
319-412 4dx7D 30%
[Model]
31-142 4dx7E 13%
[Model]
33-142 4dx7D 13%
[Model]
357-412 4dx7E 25%
[Model]
353-413 4dx7D 25%
[Model]
49-228 4dx7D 11%
[Model]
51-228 4dx7E 11%
[Model]
87-307 4dx7D 9%
[Model]
91-307 4dx7E 10%
[Model]

2xeh: STRUCTURAL DETERMINANTS FOR IMPROVED THERMAL STABILITY OF DESIGNED ANKYRIN REPEAT PROTEINS WITH A REDESIGNED C- CAPPING MODULE.
Solved by: X-RAY, Resolution: 1.81A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

126-342 2xehA 14%
[Model]
181-377 2xehA 19%
[Model]
211-414 2xehA 23%
[Model]
289-412 2xehA 29%
[Model]
31-230 2xehA 9%
[Model]
322-412 2xehA 29%
[Model]
31-145 2xehA 16%
[Model]
356-411 2xehA 25%
[Model]
51-310 2xehA 10%
[Model]
126-342 2xehB 14%
[Model]
181-377 2xehB 19%
[Model]
211-414 2xehB 23%
[Model]
289-412 2xehB 29%
[Model]
31-230 2xehB 9%
[Model]
322-412 2xehB 29%
[Model]
31-145 2xehB 16%
[Model]
356-411 2xehB 25%
[Model]
51-310 2xehB 10%
[Model]
126-342 2xehC 14%
[Model]
181-377 2xehC 19%
[Model]
211-414 2xehC 23%
[Model]
289-412 2xehC 29%
[Model]
31-230 2xehC 9%
[Model]
322-412 2xehC 29%
[Model]
31-145 2xehC 16%
[Model]
356-411 2xehC 25%
[Model]
51-310 2xehC 10%
[Model]
390-397 2xehC 13%
[Model]
390-397 2xehB 13%
[Model]
390-397 2xehA 13%
[Model]

3noc: DESIGNED ANKYRIN REPEAT PROTEIN (DARPIN) BINDERS TO ACRB: OF THE INTERFACE
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

106-307 3nocD 11%
[Model]
128-340 3nocE 13%
[Model]
126-340 3nocD 13%
[Model]
207-374 3nocD 18%
[Model]
207-374 3nocE 18%
[Model]
211-412 3nocD 22%
[Model]
211-411 3nocE 22%
[Model]
289-414 3nocE 29%
[Model]
288-414 3nocD 28%
[Model]
31-167 3nocE 12%
[Model]
31-167 3nocD 12%
[Model]
321-414 3nocD 28%
[Model]
322-413 3nocE 28%
[Model]
31-142 3nocD 13%
[Model]
31-142 3nocE 13%
[Model]
355-412 3nocD 26%
[Model]
356-412 3nocE 25%
[Model]
51-228 3nocE 12%
[Model]
51-228 3nocD 12%
[Model]
91-307 3nocE 10%
[Model]

2v4h: NEMO CC2-LZ DOMAIN - 1D5 DARPIN COMPLEX
Solved by: X-RAY, Resolution: 2.9A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

128-310 2v4hD 9%
[Model]
126-310 2v4hC 10%
[Model]
154-343 2v4hD 12%
[Model]
182-343 2v4hC 14%
[Model]
207-377 2v4hD 16%
[Model]
209-377 2v4hC 16%
[Model]
287-413 2v4hD 30%
[Model]
288-412 2v4hC 30%
[Model]
33-97 2v4hC 20%
[Model]
317-413 2v4hD 29%
[Model]
320-444 2v4hC 24%
[Model]
30-144 2v4hC 12%
[Model]
30-145 2v4hD 12%
[Model]
352-414 2v4hD 24%
[Model]
354-414 2v4hC 25%
[Model]
47-165 2v4hD 12%
[Model]
50-230 2v4hC 9%
[Model]
85-230 2v4hD 11%
[Model]