SWISS-MODEL Repository - Model Details

Model Overview
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1
378

Sequence
UniProt O08707
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
7tm_1

Model 3D Structure
Model information:
Modelled residue range: 39 to 319
Based on template: [ 2lnl ]  
Sequence Identity [%]: 36%
Model date: 2013-05-04
Revision date: 2013-04-01

Quaternary structure information: [details]
Template (2lnlA): Unknown
Model: SINGLE CHAIN

Ligand information: [details]
Ligands in the template: none.
Ligands in the model: none.
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

Alignment

TARGET    1           EVLS FGRVFLPVVY SLIFVLGLAG NLLLLVVLLH SAPRRRTMEL
2lnlA     29    pcml--etet lnkyvviiay alvfllsllg nslvmlvily srvgrsvtdv
                                                                      
TARGET                      hhhhhhhhh hhhhhhhhhh hhhhhhhhhh        hhh
2lnlA                       hhhhhhhhh hhhhhhhhhh hhhhhhhhhh        hhh


TARGET    45    YLLNLAVSNL LFVVTMPFWA ISVAWHWVFG SFLCKVISTL YSINFYCGIF
2lnlA     77    yllnlaladl lfaltlpiwa askvngwifg tflckvvsll kevnfysgil
                                                                      
TARGET          hhhhhhhhhh hhh   hhhh hhhh        hhhhhhhhh hhhhhhhhhh
2lnlA           hhhhhhhhhh hhh   hhhh hhhh        hhhhhhhhh hhhhhhhhhh


TARGET    95    FITCMSLDKY LEIVHAQPLH RPKAQFRNLL LI--VMVWIT SLAISVPEMV
2lnlA     127   llacisvdry laivhat--- rtltqkrhlv kfvclgcwgl smnlslpffl
                                                                      
TARGET          hhhhhhhhhh hh               hhhh        hhh hhh   hhh 
2lnlA           hhhhhhhhhh hh               hhhh hhhhhhhhhh hhhhhhhhhh


TARGET    143   FVQIHQTLDG VWHCYADFGG HATIWKLYLR FQLNLLGFLL PLLAMIFFYS
2lnlA     174   frqayhpnns spvcyevlgn dtakwrmvlr ilphtfgfiv plfvmlfcyg
                                                                      
TARGET                                      hhhh hhhhhhhhhh hhhhhhhhhh
2lnlA                                       hhhh hhhh   hhh hhhhhhhhhh


TARGET    193   RIGCVLVRLR PPGQGRALRM AAALVIVFFM LWFPYNLTLF LHSLLDLHVF
2lnlA     224   ftlrtlfkah mgqkhramrv ifavvlifll cwlpynlvll adtlmrtqvi
                                                                      
TARGET          hhh              hhhh hhhhhhhhhh hhhhhhhhhh hhhh      
2lnlA           hhh              hhhh hhhhhhhhhh hhhhhhhhhh hhhh      


TARGET    243   -GNCEISHRL DYTLQVTESL AFSHCCFTPV LYAFCSHRFR  ---------
2lnlA     274   qescerrnni graldateil gflhsclnpi iyafigqnfr hgflkilamh
                                                                      
TARGET            hhhhhhh    hhhhhhhh hhh   hhhh hhhh                 
2lnlA              hhhhhh    hhhhhhhh hhh   hhhh hhhh    hh hhhhhhhhh 


TARGET          -                                                     
2lnlA     324   g                                                     
                                                                      
TARGET                                                                
2lnlA                                                                 



Quality


Template's ligands section
Template without ligands.
No ligands were included in the model.


Oligomer Annotation of the Template structure
Sorry, we haven't found any oligomeric annotation for this template.
Either the complex was too large (>60 chains) or the structures was excluded for other reasons.
Please contact help@swissmodel.org for more information!


Template Selection
 - Start SMR-Pipeline for:532bb49bb8acf6c5876223d01c5a09f7 on BC2-cluster at Sat May  4 00:08:24
2013 


 - Analyze BLAST summary ... 
 - No templates found with BLAST (seqid-cutoff: 60): go to HHSEARCH

 - No A3m found

 - Run HHSearch to detect more templates...
FATAL - No md5 found in hash for: 3zpqB
FATAL - No md5 found in hash for: 3zprB
FATAL - No md5 found in hash for: 3zpqA
FATAL - No md5 found in hash for: 3zprA
 - Generate new template library
 - Run template selection against modified template library 
 - Summarize templates: 
 - Skipping oligomeric state prediction due to too many templates for cluster: 50_329
 - Warning: Oligomer Prediction was not successfull!

 - Warning: clustersMergedFile not found
 - Proof template(s) selection compared to previous Repository update
 - Different number of templates selected (old0 vs new:3): model based on new templates
 - Send 3 Templates for modeling

 - @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@
 -         ***********************************************************
 - building model based on 2lnlA (39-319) was successful 
 -     ************
 - building model based on 2lotA (20-78) was successful 
 -    ********************************************************************
 - building model based on 2ziyA (15-336) was successful 
 - Repository Pipeline parameter

   Cut-off parameters to model the target based on a BLAST target-template alignment
    Evalue :                                     0.0001
    Minimum Template size (aa) for ranking :     25
    Minimum Sequence identity :                  60

   Cut-off parameters to model the target based on a HHSearch target-template alignment
    Evalue :                                     0.0001
    Probability :                                50
    MAC :                                        0.3

   Parameters for model selection
    Minimal number of uncovered target
     residues after BLAST to run HHSEARCH :      50
    Minimal number of uncovered target
     residues to model an additional template :  25
    
 - Finish SMR-Pipeline for:532bb49bb8acf6c5876223d01c5a09f7 on BC2-cluster at Sat May  4 00:17:19
2013 




Template Description
Match Chain SeqId

2lnl: STRUCTURE OF HUMAN CXCR1 IN PHOSPHOLIPID BILAYERS
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-329 2lnlA 35%
[Model]

1fdf: HELIX 7 BOVINE RHODOPSIN
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

299-320 1fdfA 27%
[Model]

1hll: NMR STRUCTURE OF T3-I2, A 32 RESIDUE PEPTIDE FROM THE ALPH2A ADRENERGIC RECEPTOR
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

129-159 1hllA 26%
[Model]

1hof: NMR STRUCTURE OF T3-I2, A 32 RESIDUE PEPTIDE FROM THE ALPH2A ADRENERGIC RECEPTOR
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

129-159 1hofA 26%
[Model]

2lou: AR55 SOLUBILISED IN DPC MICELLES
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

20-78 2louA 24%
[Model]

2lov: AR55 SOLUBILISED IN LPPG MICELLES
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

20-78 2lovA 24%
[Model]

2low: SOLUTION STRUCTURE OF AR55 IN 50% HFIP
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

20-78 2lowA 24%
[Model]

2lot: AR55 SOLUBILISED IN SDS MICELLES
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

20-78 2lotA 24%
[Model]

4ea3: STRUCTURE OF THE N/OFQ OPIOID RECEPTOR IN COMPLEX WITH A PMIMETIC
Solved by: X-RAY, Resolution: 3.01A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

44-325 4ea3B 22%
[Model]
44-323 4ea3A 23%
[Model]

1hod: NMR STRUCTURE OF D130I MUTANT T3-I2, A 32 RESIDUE PEPTIDE FROM THE ALPHA 2A ADRENERGIC RECEPTOR
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

129-159 1hodA 23%
[Model]

1ho9: BEST 20 NMR CONFORMERS OF D130I MUTANT T3-I2, A 32 RESIDUEPEPTIDE FROM THE ALPHA 2A ADRENERGIC RECEPTOR
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

129-159 1ho9A 23%
[Model]

3oe6: CRYSTAL STRUCTURE OF THE CXCR4 CHEMOKINE RECEPTOR IN COMPLSMALL MOLECULE ANTAGONIST IT1T IN I222 SPACEGROUP
Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-321 3oe6A 22%
[Model]

2y00: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND PARTIAL AGONIST DOBUTAMINE (CRYSTAL DOB92)
Solved by: X-RAY, Resolution: 3.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-326 2y00B 20%
[Model]
44-326 2y00A 21%
[Model]

2vt4: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND CYANOPINDOLOL
Solved by: X-RAY, Resolution: 2.7A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

47-327 2vt4B 21%
[Model]
46-326 2vt4D 21%
[Model]
47-326 2vt4A 21%
[Model]
47-313 2vt4C 21%
[Model]

2y04: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND PARTIAL AGONIST SALBUTAMOL
Solved by: X-RAY, Resolution: 3.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-326 2y04B 20%
[Model]
44-326 2y04A 21%
[Model]

2y01: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND PARTIAL AGONIST DOBUTAMINE (CRYSTAL DOB102)
Solved by: X-RAY, Resolution: 3.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-326 2y01B 20%
[Model]
44-326 2y01A 21%
[Model]

2y02: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND AGONIST CARMOTEROL
Solved by: X-RAY, Resolution: 3.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-326 2y02B 20%
[Model]
44-326 2y02A 21%
[Model]

4amj: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND BIASED AGONIST CARVEDILOL
Solved by: X-RAY, Resolution: 2.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

43-326 4amjB 20%
[Model]
44-326 4amjA 21%
[Model]

3oe9: CRYSTAL STRUCTURE OF THE CHEMOKINE CXCR4 RECEPTOR IN COMPLSMALL MOLECULE ANTAGONIST IT1T IN P1 SPACEGROUP
Solved by: X-RAY, Resolution: 3.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-312 3oe9B 21%
[Model]
42-312 3oe9A 21%
[Model]

4gpo: OLIGOMEIC TURKEY BETA1-ADRENERGIC G PROTEIN-COUPLED RECEPT
Solved by: X-RAY, Resolution: 3.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-325 4gpoA 21%
[Model]
45-325 4gpoB 21%
[Model]

2y03: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND AGONIST ISOPRENALINE
Solved by: X-RAY, Resolution: 2.85A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-326 2y03B 20%
[Model]
45-326 2y03A 21%
[Model]

3oe0: CRYSTAL STRUCTURE OF THE CXCR4 CHEMOKINE RECEPTOR IN COMPLCYCLIC PEPTIDE ANTAGONIST CVX15
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

33-312 3oe0A 21%
[Model]

3odu: THE 2.5 A STRUCTURE OF THE CXCR4 CHEMOKINE RECEPTOR IN COMSMALL MOLECULE ANTAGONIST IT1T
Solved by: X-RAY, Resolution: 2.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

34-330 3oduA 21%
[Model]
38-326 3oduB 21%
[Model]

3oe8: CRYSTAL STRUCTURE OF THE CXCR4 CHEMOKINE RECEPTOR IN COMPLSMALL MOLECULE ANTAGONIST IT1T IN P1 SPACEGROUP
Solved by: X-RAY, Resolution: 3.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-314 3oe8A 21%
[Model]
43-314 3oe8C 21%
[Model]
42-313 3oe8B 21%
[Model]

4ami: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND BIASED AGONIST BUCINDOLOL
Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-326 4amiB 21%
[Model]
45-326 4amiA 21%
[Model]

2ycx: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND ANTAGONIST CYANOPINDOLOL
Solved by: X-RAY, Resolution: 3.25A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

46-326 2ycxB 20%
[Model]
46-323 2ycxA 20%
[Model]

2ycz: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONBOUND ANTAGONIST IODOCYANOPINDOLOL
Solved by: X-RAY, Resolution: 3.65A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

46-327 2yczB 20%
[Model]
46-327 2yczA 20%
[Model]

2ycy: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND ANTAGONIST CYANOPINDOLOL
Solved by: X-RAY, Resolution: 3.65A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

47-327 2ycyA 20%
[Model]
46-327 2ycyB 20%
[Model]

2ycw: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND ANTAGONIST CARAZOLOL
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-327 2ycwB 20%
[Model]
45-327 2ycwA 20%
[Model]

3sn6: CRYSTAL STRUCTURE OF THE BETA2 ADRENERGIC RECEPTOR-GS PROT
Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

46-327 3sn6R 19%
[Model]

3ayn: CRYSTAL STRUCTURE OF SQUID ISORHODOPSIN
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

38-335 3aynA 18%
[Model]
38-337 3aynB 18%
[Model]

1f88: CRYSTAL STRUCTURE OF BOVINE RHODOPSIN
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-330 1f88A 18%
[Model]
43-330 1f88B 18%
[Model]

3aym: CRYSTAL STRUCTURE OF THE BATHO INTERMEDIATE OF SQUID RHODO
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

38-335 3aymA 18%
[Model]
38-337 3aymB 18%
[Model]

2z73: CRYSTAL STRUCTURE OF SQUID RHODOPSIN
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

38-335 2z73A 18%
[Model]
38-337 2z73B 18%
[Model]

3oax: CRYSTAL STRUCTURE OF BOVINE RHODOPSIN WITH BETA-IONONE
Solved by: X-RAY, Resolution: 2.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

44-332 3oaxB 17%
[Model]
44-332 3oaxA 17%
[Model]

3vg9: CRYSTAL STRUCTURE OF HUMAN ADENOSINE A2A RECEPTOR WITH AN INVERSE-AGONIST ANTIBODY AT 2.7 A RESOLUTION
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

49-332 3vg9A 17%
[Model]

3c9m: STRUCTURE OF A MUTANT BOVINE RHODOPSIN IN HEXAGONAL CRYSTAFORM
Solved by: X-RAY, Resolution: 3.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

44-330 3c9mA 17%
[Model]

4a4m: CRYSTAL STRUCTURE OF THE LIGHT-ACTIVATED CONSTITUTIVELY ACN2C,M257Y,D282C RHODOPSIN MUTANT IN COMPLEX WITH A PEPTIDRESEMBLING THE C-TERMINUS OF THE GALPHA-PROTEIN SUBUNIT (
Solved by: X-RAY, Resolution: 3.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-329 4a4mA 17%
[Model]

1gzm: STRUCTURE OF BOVINE RHODOPSIN IN A TRIGONAL CRYSTAL FORM
Solved by: X-RAY, Resolution: 3.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-331 1gzmB 17%
[Model]
42-331 1gzmA 17%
[Model]

3vga: CRYSTAL STRUCTURE OF HUMAN ADENOSINE A2A RECEPTOR WITH AN INVERSE-AGONIST ANTIBODY AT 3.1 A RESOLUTION
Solved by: X-RAY, Resolution: 3.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

49-330 3vgaA 17%
[Model]

3uzc: THERMOSTABILISED ADENOSINE A2A RECEPTOR IN COMPLEX WITH 4-PHENYL-1,2,4-TRIAZIN-6-YL)-2-CHLOROPHENOL
Solved by: X-RAY, Resolution: 3.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

50-327 3uzcA 17%
[Model]

2hpy: CRYSTALLOGRAPHIC MODEL OF LUMIRHODOPSIN
Solved by: X-RAY, Resolution: 2.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

44-332 2hpyB 17%
[Model]
44-332 2hpyA 17%
[Model]

2ks9: SOLUTION CONFORMATION OF SUBSTANCE P IN WATER COMPLEXED WI
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-335 2ks9A 17%
[Model]

3uza: THERMOSTABILISED ADENOSINE A2A RECEPTOR IN COMPLEX WITH 6-DIMETHYLPYRIDIN-4-YL)-5-PHENYL-1,2,4-TRIAZIN-3-AMINE
Solved by: X-RAY, Resolution: 3.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

50-327 3uzaA 17%
[Model]

2ziy: CRYSTAL STRUCTURE OF SQUID RHODOPSIN
Solved by: X-RAY, Resolution: 3.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

15-336 2ziyA 17%
[Model]

3c9l: STRUCTURE OF GROUND-STATE BOVINE RHODOSPIN IN A HEXAGONAL CRYSTAL FORM
Solved by: X-RAY, Resolution: 3.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-331 3c9lA 17%
[Model]

3pwh: THERMOSTABILISED ADENOSINE A2A RECEPTOR
Solved by: X-RAY, Resolution: 3.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

50-327 3pwhA 17%
[Model]

2ksa: SUBSTANCE P IN DMPC/CHAPS ISOTROPIC Q=0.25 BICELLES AS A LNK1R
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-335 2ksaA 17%
[Model]

3pqr: CRYSTAL STRUCTURE OF METARHODOPSIN II IN COMPLEX WITH A C-PEPTIDE DERIVED FROM THE GALPHA SUBUNIT OF TRANSDUCIN
Solved by: X-RAY, Resolution: 4.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-330 3pqrA 17%
[Model]

3cap: CRYSTAL STRUCTURE OF NATIVE OPSIN: THE G PROTEIN-COUPLED RECEPTOR RHODOPSIN IN ITS LIGAND-FREE STATE
Solved by: X-RAY, Resolution: 4.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-330 3capB 17%
[Model]
42-330 3capA 17%
[Model]

2koe: HUMAN CANNABINOID RECEPTOR 1 - HELIX 7/8 PEPTIDE
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

294-329 2koeA 17%
[Model]

2ksb: SUBSTANCE P IN ISOTROPIC Q=0.25 DMPC/CHAPS/GM1 BICELLES ASFOR NK1R
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-335 2ksbA 17%
[Model]

1jfp: STRUCTURE OF BOVINE RHODOPSIN (DARK ADAPTED)
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

50-332 1jfpA 17%
[Model]

2j4y: CRYSTAL STRUCTURE OF A RHODOPSIN STABILIZING MUTANT EXPRESSED IN MAMMALIAN CELLS
Solved by: X-RAY, Resolution: 3.4A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-330 2j4yA 17%
[Model]
42-330 2j4yB 17%
[Model]

3rey: THERMOSTABILISED ADENOSINE A2A RECEPTOR IN COMPLEX WITH XA
Solved by: X-RAY, Resolution: 3.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

50-327 3reyA 17%
[Model]

3dqb: CRYSTAL STRUCTURE OF THE ACTIVE G-PROTEIN-COUPLED RECEPTOROPSIN IN COMPLEX WITH A C-TERMINAL PEPTIDE DERIVED FROM THE GALPHA SUBUNIT OF TRANSDUCIN
Solved by: X-RAY, Resolution: 4.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-330 3dqbA 17%
[Model]

1ln6: STRUCTURE OF BOVINE RHODOPSIN (METARHODOPSIN II)
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

50-332 1ln6A 17%
[Model]

2x72: CRYSTAL STRUCTURE OF THE CONSTITUTIVELY ACTIVE E113Q,N2C, RHODOPSIN MUTANT WITH BOUND GALPHACT PEPTIDE.
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-330 2x72A 17%
[Model]

1hzx: CRYSTAL STRUCTURE OF BOVINE RHODOPSIN
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-331 1hzxA 18%
[Model]
42-330 1hzxB 17%
[Model]

2i37: CRYSTAL STRUCTURE OF A PHOTOACTIVATED RHODOPSIN
Solved by: X-RAY, Resolution: 4.15A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

43-322 2i37A 17%
[Model]
42-331 2i37C 18%
[Model]
43-330 2i37B 17%
[Model]

2ped: CRYSTALLOGRAPHIC MODEL OF 9-CIS-RHODOPSIN
Solved by: X-RAY, Resolution: 2.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

44-332 2pedA 17%
[Model]
44-332 2pedB 17%
[Model]

2i35: CRYSTAL STRUCTURE OF RHOMBOHEDRAL CRYSTAL FORM OF GROUND- STATE RHODOPSIN
Solved by: X-RAY, Resolution: 3.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-331 2i35A 17%
[Model]

2i36: CRYSTAL STRUCTURE OF TRIGONAL CRYSTAL FORM OF GROUND-STATERHODOPSIN
Solved by: X-RAY, Resolution: 4.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-330 2i36A 17%
[Model]
42-327 2i36C 17%
[Model]
43-328 2i36B 17%
[Model]

2ydo: THERMOSTABILISED HUMAN A2A RECEPTOR WITH ADENOSINE BOUND
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

49-340 2ydoA 17%
[Model]

1l9h: CRYSTAL STRUCTURE OF BOVINE RHODOPSIN AT 2.6 ANGSTROMS RESOLUTION
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-331 1l9hA 18%
[Model]
42-330 1l9hB 17%
[Model]

3rfm: THERMOSTABILISED ADENOSINE A2A RECEPTOR IN COMPLEX WITH CA
Solved by: X-RAY, Resolution: 3.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

50-327 3rfmA 17%
[Model]

3pxo: CRYSTAL STRUCTURE OF METARHODOPSIN II
Solved by: X-RAY, Resolution: 4.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-330 3pxoA 17%
[Model]

2g87: CRYSTALLOGRAPHIC MODEL OF BATHORHODOPSIN
Solved by: X-RAY, Resolution: 2.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

44-332 2g87A 17%
[Model]
44-332 2g87B 17%
[Model]

1u19: CRYSTAL STRUCTURE OF BOVINE RHODOPSIN AT 2.2 ANGSTROMS RESOLUTION
Solved by: X-RAY, Resolution: 2.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

44-332 1u19B 17%
[Model]
44-332 1u19A 17%
[Model]

3kj6: CRYSTAL STRUCTURE OF A METHYLATED BETA2 ADRENERGIC RECEPTOFAB COMPLEX
Solved by: X-RAY, Resolution: 3.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

48-330 3kj6A 16%
[Model]

4dkl: CRYSTAL STRUCTURE OF THE MU-OPIOID RECEPTOR BOUND TO A MORANTAGONIST
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-326 4dklA 16%
[Model]

2r4s: CRYSTAL STRUCTURE OF THE HUMAN BETA2 ADRENOCEPTOR
Solved by: X-RAY, Resolution: 3.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

51-331 2r4sA 16%
[Model]

2r4r: CRYSTAL STRUCTURE OF THE HUMAN BETA2 ADRENOCEPTOR
Solved by: X-RAY, Resolution: 3.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

51-331 2r4rA 16%
[Model]

2ydv: THERMOSTABILISED HUMAN A2A RECEPTOR WITH NECA BOUND
Solved by: X-RAY, Resolution: 2.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-342 2ydvA 16%
[Model]

3vw7: CRYSTAL STRUCTURE OF HUMAN PROTEASE-ACTIVATED RECEPTOR 1 (WITH ANTAGONIST VORAPAXAR AT 2.2 ANGSTROM
Solved by: X-RAY, Resolution: 2.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

40-317 3vw7A 15%
[Model]

4djh: STRUCTURE OF THE HUMAN KAPPA OPIOID RECEPTOR IN COMPLEX WI
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-327 4djhA 15%
[Model]
44-327 4djhB 15%
[Model]

4ej4: STRUCTURE OF THE DELTA OPIOID RECEPTOR BOUND TO NALTRINDOL
Solved by: X-RAY, Resolution: 3.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

44-320 4ej4A 15%
[Model]

3pbl: STRUCTURE OF THE HUMAN DOPAMINE D3 RECEPTOR IN COMPLEX WITETICLOPRIDE
Solved by: X-RAY, Resolution: 2.89A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

49-328 3pblA 14%
[Model]
49-328 3pblB 14%
[Model]

4eiy: CRYSTAL STRUCTURE OF THE CHIMERIC PROTEIN OF A2AAR-BRIL INWITH ZM241385 AT 1.8A RESOLUTION
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

44-329 4eiyA 13%
[Model]

4ib4: CRYSTAL STRUCTURE OF THE CHIMERIC PROTEIN OF 5-HT2B-BRIL IWITH ERGOTAMINE
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

49-331 4ib4A 13%
[Model]

4grv: THE CRYSTAL STRUCTURE OF THE NEUROTENSIN RECEPTOR NTS1 IN NEUROTENSIN (8-13)
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-320 4grvA 13%
[Model]

3uon: STRUCTURE OF THE HUMAN M2 MUSCARINIC ACETYLCHOLINE RECEPTOAN ANTAGONIST
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

43-326 3uonA 12%
[Model]

4daj: STRUCTURE OF THE M3 MUSCARINIC ACETYLCHOLINE RECEPTOR
Solved by: X-RAY, Resolution: 3.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

43-324 4dajB 12%
[Model]
43-324 4dajC 12%
[Model]
43-324 4dajA 12%
[Model]
45-326 4dajD 12%
[Model]

4iaq: CRYSTAL STRUCTURE OF THE CHIMERIC PROTEIN OF 5-HT1B-BRIL IWITH DIHYDROERGOTAMINE (PSI COMMUNITY TARGET, E. XU)
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

44-329 4iaqA 12%
[Model]

4iar: CRYSTAL STRUCTURE OF THE CHIMERIC PROTEIN OF 5-HT1B-BRIL IWITH ERGOTAMINE (PSI COMMUNITY TARGET, E. XU)
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

44-329 4iarA 12%
[Model]

3rze: STRUCTURE OF THE HUMAN HISTAMINE H1 RECEPTOR IN COMPLEX WI
Solved by: X-RAY, Resolution: 3.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

48-327 3rzeA 12%
[Model]

3qak: AGONIST BOUND STRUCTURE OF THE HUMAN ADENOSINE A2A RECEPTO
Solved by: X-RAY, Resolution: 2.71A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

48-330 3qakA 11%
[Model]

3v2w: CRYSTAL STRUCTURE OF A LIPID G PROTEIN-COUPLED RECEPTOR AT
Solved by: X-RAY, Resolution: 3.35A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-325 3v2wA 11%
[Model]

3eml: THE 2.6 A CRYSTAL STRUCTURE OF A HUMAN A2A ADENOSINE RECEPTOR BOUND TO ZM241385.
Solved by: X-RAY, Resolution: 2.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

50-333 3emlA 11%
[Model]

3v2y: CRYSTAL STRUCTURE OF A LIPID G PROTEIN-COUPLED RECEPTOR AT
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-328 3v2yA 11%
[Model]

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Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.




SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.