SWISS-MODEL Repository - Model Details

Model Overview
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1
469

Sequence
UniProt O27605
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
Oxidored_nitro

Model 3D Structure
Model information:
Modelled residue range: 12 to 464
Based on template: [ 1fp4 ]  
Sequence Identity [%]: 36%
Model date: 2008-08-31
Revision date: 2008-08-31

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-08-31. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    12                            IPERKKHV YIKKKEDPEE DLPLCNTKTI
1fp4A     5     sreevesliq evlevypeka --rkdrnkhl avnc------ --iisnkksq
                                                                      
TARGET                                   hhhh ss sss                  
1fp4A             hhhhhhhh hhhh   hhh   hhhhh ss sss                  


TARGET    40    PGCMTERGCA FAGAKGVITG AIKDALHVIH SPVGCTAYGY GTKRYPTSQE
1fp4A     54    pglmtirgca yagskgvvwg pikdmihish gpvgcgqysr agrrnyy---
                                                                      
TARGET                   h hhhhhhhhhh      sssss    hhhhhh            
1fp4A                    h hhhhhhhhhh      sssss s  hhhhhh     sss    


TARGET    90    MPDGSLFPIE NFNLKYITGT NLTETDVVFG GMDKLKRCII EAAKEFPEAN
1fp4A     101   --igttgv-n af-vtmnfts dfqekdivfg gdkklaklid evetlfplnk
                                                                      
TARGET                                   hhhhh    hhhhhhhhh hhhhh     
1fp4A                               s ss hhhhh    hhhhhhhhh hhhhh     


TARGET    140   AVYTYATCTT GLIGDDIEAV SREVSEEIGK DVVAINAPGF AGPTQSKGHQ
1fp4A     147   gisvqsecpi gligddiesv skvkgaelsk tivpvrcegf rgvsqslgqh
                                                                      
TARGET          sssssss hh hh     hhh hhhhhhhh   sssss           hhhhh
1fp4A           sssssss hh hh     hhh hhhhhhhh   sssss           hhhhh


TARGET    190   VANYTLFENL VGTAEPPV-- -VTDYDVNLI GEYNIDGDLW VLKRYFEEMG
1fp4A     197   iandavrdwv lgkrdedttf astpydvaii gdyniggdaw ssrilleemg
                                                                      
TARGET          hhhhhhhh                  ssssss        hhh hhhhhhhh  
1fp4A           hhhhhhhh                  ssssss    sss hhh hhhhhhhh  


TARGET    237   INVLSTFTGD CCHDEIKWMH RAKLSLVRCQ RSATYIARLL EERYNVPYMK
1fp4A     247   lrcvaqwsgd gsiseieltp kvklnlvhcy rsmnyisrhm eekygipwme
                                                                      
TARGET           sss         hhhhhhhh    sssss      hhhhhhh hhh   ssss
1fp4A            sss          hhhhhhh    sssss      hhhhhhh hhh   ssss


TARGET    287   VDFFGIEYCK RNLMATGEYF GI--PERAEE VIKDRMEKIG PEIEYLRNKL
1fp4A     297   ynffgptkti eslraiaakf desiqkkcee viakykpewe avvakyrprl
                                                                      
TARGET          s    hhhhh hhhhhhhh         hhhh hhhhhhhhhh hhhhhhhhh 
1fp4A           s    hhhhh hhhhhhhh    hhhhhhhhh hhh   hhhh hhhhhhhhh 


TARGET    335   AGKKVWVFSG GPKNWHLPRP LEDELGMEVV AVSTMFEHED GYEKIKKRVG
1fp4A     347   egkrvmlyig glrprhviga ye-dlgmevv gtgyefahnd dydrtmkemg
                                                                      
TARGET            sssssss    hhhhhh   sss ssssss sss      h hhhhhhhh  
1fp4A             sssssss    hhhhhhhh hh     sss sss     hh hhhhhhhh  


TARGET    385   ENTVIVDDPN SLELEEIIEK YRPDIILSGI KEKYLAHKLG VPCVLIHSYE
1fp4A     396   dstllyddvt gyefeefvkr ikpdligsgi kekfifqkmg ipfremhswd
                                                                      
TARGET            sssss    hhhhhhhhhh h   ssss      hhhhhh     sss    
1fp4A             sssss    hhhhhhhhhh h   ssss      hhhhhh   sssss    


TARGET    435   -NGPYIGFEG FLNLARDMYA SIYSPVWDLL E ---                
1fp4A     446   ysgpyhgfdg faifardmdm tlnnpcwkkl qapwe                
                                                                      
TARGET                 hhh hhhhhhhhhh hh   hh                         
1fp4A                  hhh hhhhhhhhhh hh   hh

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: 373af1f80f547d1a05f9b102a3097b1a on BC2-cluster at Sun Aug 31 04:21:32 2008 
NO HITS FOUND IN BLAST-SEARCH FOR SEQID-CUTOFF 60 GO TO HHSEARCH


############# TEMPLATES SELECTED #############

>373af1f80f547d1a05f9b102a3097b1a
*******************************************************************************
>1fp4A Evalue:0 SeqID:36.601 Method:HHSEARCH Type:MODEL
--**-*********-**************************************************************--


TEMPLATE ID    START          STOP           METHOD         STATUS         
1fp4A          12             464            HHSEARCH       BUILT          

FINISHED PIPELINE ON ID: 373af1f80f547d1a05f9b102a3097b1a on gopt-68.cluster.bc2.ch BC2-Cluster at
Sun Aug 31 04:26:06 2008


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.