SWISS-MODEL Repository - Model Details

Model Overview
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1
399

Sequence
UniProt O54798
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

STRING
O54798: 10090.ENSMUSP000

Domain
Link to: [ InterPro ]
7tm_1

Model 3D Structure
Model information:
Modelled residue range: 259 to 342
Based on template: [ 4eiy ]  
Sequence Identity [%]: 33%
Model date: 2013-05-07
Revision date: 2013-04-01

Quaternary structure information: [details]
Template (4eiyA): Unknown
Model: SINGLE CHAIN

Ligand information: [details]
Ligands in the template: PEG: 2.
Ligands in the model: none.
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

Alignment

                                                       
4eiyA     65535  gappimgssv yitvelaiav lailgnvlvc wavwlnsnlq nvtnyfvvsl
                                                                      
                                                       
4eiyA               hhhhhh hhhhhhhhhh hhhhhhhhhh hhhhh       hhhhhhhhh


                                                       
4eiyA     49    aaadiavgvl aipfaitist gfcaachgcl fiacfvlvlt qssifsllai
                                                                      
                                                       
4eiyA           hhhhhhhh    hhhhhhhh   ssssshhhh hhhhhhhhhh hhhhhhhhhh


                                                       
4eiyA     99    aidryiairi plrynglvtg trakgiiaic wvlsfaiglt pmlgwnncgq
                                                                      
                                                       
4eiyA           hhhhhhhh       hh   h hhhhhhhhhh hhhhhhh    hh        


                                                       
4eiyA     149   pkegknhsqg cgegqvaclf edvvpmnymv yfnffacvlv plllmlgvyl
                                                                      
                                                       
4eiyA             hhhhhhh     sssss        hhhhh hhhhhhhhhh hhhhhhhhhh


                                                       
4eiyA     199   riflaarrql adlednwetl ndnlkvieka dnaaqvkdal tkmraaalda
                                                                      
                                                       
4eiyA           hhhhhhhhhh hhhhhhhhhh hhhhhhhh     hhhhhhhh hhhhhhhhhh


                                                       
4eiyA     1041  qkmkdfrhgf dilvgqidda lklanegkvk eaqaaaeqlk ttrnayiqky
                                                                      
                                                       
4eiyA              hhhhhhh hhhhhhhhhh hhhh   hhh hhhhhhhhhh hhhh   hhh


TARGET    1          ARKQI ESRKRIAKTV LVLVALFALC WLPNHLLYLY HSFTYESYAN
4eiyA     1106  ler--arstl qkevhaaksl aiivglfalc wlplhiincf tffcpdc---
                                                                      
TARGET                hhhh hhhhhhhhhh hhhhhhhhhh hhhhhhhhhh hhh       
4eiyA           hhh  hhhhh hhhhhhhhhh hhhhhhhhhh hhhhhhhhhh hhh       


TARGET    46    HSDVPFVIII FSRVLAFSNS CVNPFALYWL SKTFQQHFK  ------    
4eiyA     263   -shaplwlmy laivlshtns vvnpfiyayr irefrqtfrk iirshv    
                                                                      
TARGET               hhhhh hhhhhhhh    hhhhhhhh    hhhhhhh            
4eiyA                hhhhh hhhhhhhh    hhhhhhhh    hhhhhhhh hhhhh     



Quality


Template's ligands section
Ligands in the template: PEG: 2.
The template contains ligands that are not yet part of the pipeline. Ligands which are currently assessed are listed in the help page.
No ligands were included in the model.


Oligomer Annotation of the Template structure
Sorry, we haven't found any oligomeric annotation for this template.
Either the complex was too large (>60 chains) or the structures was excluded for other reasons.
Please contact help@swissmodel.org for more information!


Template Selection
 - Start SMR-Pipeline for:969ff895272b77884027dd0fd93e6ee5 on BC2-cluster at Tue May  7 21:35:43
2013 


 - Analyze BLAST summary ... 
 - No templates found with BLAST (seqid-cutoff: 60): go to HHSEARCH

 - Run HHSearch to detect more templates...
FATAL - No md5 found in hash for: 3zpqB
FATAL - No md5 found in hash for: 3zprB
FATAL - No md5 found in hash for: 3zpqA
FATAL - No md5 found in hash for: 3zprA
 - Generate new template library
 - Run template selection against modified template library 
 - Summarize templates: 
 - Skipping oligomeric state prediction due to too many templates for cluster: 51_349
 - Warning: Oligomer Prediction was not successfull!

 - Warning: clustersMergedFile not found
 - Proof template(s) selection compared to previous Repository update
 - Different number of templates selected (old0 vs new:4): model based on new templates
 - Send 4 Templates for modeling

 - @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@
 -                                                     *****************
 - building model based on 4eiyA (259-342) was successful 
 -           *****************************************
 - building model based on 4dklA (50-251) was successful 
 -            **********************************************************
 - building model based on 4ea3A (54-342) was successful 
 -  *********************************************************************
 - building model based on 2j4yA (5-350) was not successful go to next best template
 -  *********************************************************************
 - building model based on 2j4yB (5-350) was not successful go to next best template
 -  *********************************************************************
 - building model based on 1hzxB (6-350) was not successful go to next best template
 -  *********************************************************************
 - building model based on 1l9hB (6-350) was not successful go to next best template
 - Repository Pipeline parameter

   Cut-off parameters to model the target based on a BLAST target-template alignment
    Evalue :                                     0.0001
    Minimum Template size (aa) for ranking :     25
    Minimum Sequence identity :                  60

   Cut-off parameters to model the target based on a HHSearch target-template alignment
    Evalue :                                     0.0001
    Probability :                                50
    MAC :                                        0.3

   Parameters for model selection
    Minimal number of uncovered target
     residues after BLAST to run HHSEARCH :      50
    Minimal number of uncovered target
     residues to model an additional template :  25
    
 - Finish SMR-Pipeline for:969ff895272b77884027dd0fd93e6ee5 on BC2-cluster at Tue May  7 21:46:37
2013 




Template Description
Match Chain SeqId

4ea3: STRUCTURE OF THE N/OFQ OPIOID RECEPTOR IN COMPLEX WITH A PMIMETIC
Solved by: X-RAY, Resolution: 3.01A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

47-344 4ea3B 27%
[Model]
48-342 4ea3A 28%
[Model]

2koe: HUMAN CANNABINOID RECEPTOR 1 - HELIX 7/8 PEPTIDE
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

311-348 2koeA 26%
[Model]

1fdf: HELIX 7 BOVINE RHODOPSIN
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

319-339 1fdfA 24%
[Model]

3sn6: CRYSTAL STRUCTURE OF THE BETA2 ADRENERGIC RECEPTOR-GS PROT
Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

47-346 3sn6R 24%
[Model]

2ycw: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND ANTAGONIST CARAZOLOL
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

47-346 2ycwB 22%
[Model]
47-346 2ycwA 22%
[Model]

2ksa: SUBSTANCE P IN DMPC/CHAPS ISOTROPIC Q=0.25 BICELLES AS A LNK1R
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-355 2ksaA 22%
[Model]

3uzc: THERMOSTABILISED ADENOSINE A2A RECEPTOR IN COMPLEX WITH 4-PHENYL-1,2,4-TRIAZIN-6-YL)-2-CHLOROPHENOL
Solved by: X-RAY, Resolution: 3.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

51-347 3uzcA 22%
[Model]

2y03: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND AGONIST ISOPRENALINE
Solved by: X-RAY, Resolution: 2.85A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

47-345 2y03B 22%
[Model]
47-345 2y03A 22%
[Model]

2ksb: SUBSTANCE P IN ISOTROPIC Q=0.25 DMPC/CHAPS/GM1 BICELLES ASFOR NK1R
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-355 2ksbA 22%
[Model]

3kj6: CRYSTAL STRUCTURE OF A METHYLATED BETA2 ADRENERGIC RECEPTOFAB COMPLEX
Solved by: X-RAY, Resolution: 3.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

50-350 3kj6A 22%
[Model]

2ycx: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND ANTAGONIST CYANOPINDOLOL
Solved by: X-RAY, Resolution: 3.25A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

49-342 2ycxA 22%
[Model]
49-345 2ycxB 22%
[Model]

2ycz: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONBOUND ANTAGONIST IODOCYANOPINDOLOL
Solved by: X-RAY, Resolution: 3.65A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

49-346 2yczB 22%
[Model]
49-346 2yczA 22%
[Model]

1hll: NMR STRUCTURE OF T3-I2, A 32 RESIDUE PEPTIDE FROM THE ALPH2A ADRENERGIC RECEPTOR
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

132-163 1hllA 22%
[Model]

3rey: THERMOSTABILISED ADENOSINE A2A RECEPTOR IN COMPLEX WITH XA
Solved by: X-RAY, Resolution: 3.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

51-347 3reyA 22%
[Model]

3uza: THERMOSTABILISED ADENOSINE A2A RECEPTOR IN COMPLEX WITH 6-DIMETHYLPYRIDIN-4-YL)-5-PHENYL-1,2,4-TRIAZIN-3-AMINE
Solved by: X-RAY, Resolution: 3.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

51-347 3uzaA 22%
[Model]

2ks9: SOLUTION CONFORMATION OF SUBSTANCE P IN WATER COMPLEXED WI
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-355 2ks9A 22%
[Model]

2lnl: STRUCTURE OF HUMAN CXCR1 IN PHOSPHOLIPID BILAYERS
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

48-349 2lnlA 22%
[Model]

1hof: NMR STRUCTURE OF T3-I2, A 32 RESIDUE PEPTIDE FROM THE ALPH2A ADRENERGIC RECEPTOR
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

132-163 1hofA 22%
[Model]

2ycy: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND ANTAGONIST CYANOPINDOLOL
Solved by: X-RAY, Resolution: 3.65A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

49-346 2ycyA 22%
[Model]
49-346 2ycyB 22%
[Model]

3rfm: THERMOSTABILISED ADENOSINE A2A RECEPTOR IN COMPLEX WITH CA
Solved by: X-RAY, Resolution: 3.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

51-347 3rfmA 22%
[Model]

3pwh: THERMOSTABILISED ADENOSINE A2A RECEPTOR
Solved by: X-RAY, Resolution: 3.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

51-347 3pwhA 22%
[Model]

2y02: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND AGONIST CARMOTEROL
Solved by: X-RAY, Resolution: 3.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

47-345 2y02B 22%
[Model]
46-345 2y02A 21%
[Model]

4gpo: OLIGOMEIC TURKEY BETA1-ADRENERGIC G PROTEIN-COUPLED RECEPT
Solved by: X-RAY, Resolution: 3.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

47-344 4gpoA 21%
[Model]
48-344 4gpoB 21%
[Model]

2y04: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND PARTIAL AGONIST SALBUTAMOL
Solved by: X-RAY, Resolution: 3.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

47-345 2y04B 22%
[Model]
46-345 2y04A 21%
[Model]

4amj: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND BIASED AGONIST CARVEDILOL
Solved by: X-RAY, Resolution: 2.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-345 4amjB 22%
[Model]
47-345 4amjA 21%
[Model]

2r4s: CRYSTAL STRUCTURE OF THE HUMAN BETA2 ADRENOCEPTOR
Solved by: X-RAY, Resolution: 3.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

52-351 2r4sA 21%
[Model]

2y00: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND PARTIAL AGONIST DOBUTAMINE (CRYSTAL DOB92)
Solved by: X-RAY, Resolution: 3.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

47-345 2y00B 22%
[Model]
46-345 2y00A 21%
[Model]

3vg9: CRYSTAL STRUCTURE OF HUMAN ADENOSINE A2A RECEPTOR WITH AN INVERSE-AGONIST ANTIBODY AT 2.7 A RESOLUTION
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

51-350 3vg9A 21%
[Model]

2y01: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND PARTIAL AGONIST DOBUTAMINE (CRYSTAL DOB102)
Solved by: X-RAY, Resolution: 3.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

47-345 2y01B 22%
[Model]
46-345 2y01A 21%
[Model]

2ydo: THERMOSTABILISED HUMAN A2A RECEPTOR WITH ADENOSINE BOUND
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

51-355 2ydoA 21%
[Model]

4ami: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND BIASED AGONIST BUCINDOLOL
Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

47-345 4amiB 22%
[Model]
48-345 4amiA 21%
[Model]

3vga: CRYSTAL STRUCTURE OF HUMAN ADENOSINE A2A RECEPTOR WITH AN INVERSE-AGONIST ANTIBODY AT 3.1 A RESOLUTION
Solved by: X-RAY, Resolution: 3.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

51-349 3vgaA 21%
[Model]

2r4r: CRYSTAL STRUCTURE OF THE HUMAN BETA2 ADRENOCEPTOR
Solved by: X-RAY, Resolution: 3.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

52-351 2r4rA 21%
[Model]

1gzm: STRUCTURE OF BOVINE RHODOPSIN IN A TRIGONAL CRYSTAL FORM
Solved by: X-RAY, Resolution: 3.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

47-351 1gzmB 20%
[Model]
47-351 1gzmA 20%
[Model]

2ydv: THERMOSTABILISED HUMAN A2A RECEPTOR WITH NECA BOUND
Solved by: X-RAY, Resolution: 2.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

49-358 2ydvA 20%
[Model]

1ln6: STRUCTURE OF BOVINE RHODOPSIN (METARHODOPSIN II)
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

54-354 1ln6A 20%
[Model]

2i35: CRYSTAL STRUCTURE OF RHOMBOHEDRAL CRYSTAL FORM OF GROUND- STATE RHODOPSIN
Solved by: X-RAY, Resolution: 3.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

47-351 2i35A 20%
[Model]

2vt4: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND CYANOPINDOLOL
Solved by: X-RAY, Resolution: 2.7A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

49-345 2vt4D 22%
[Model]
49-346 2vt4B 21%
[Model]
49-345 2vt4A 22%
[Model]
49-332 2vt4C 20%
[Model]

1jfp: STRUCTURE OF BOVINE RHODOPSIN (DARK ADAPTED)
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

54-354 1jfpA 20%
[Model]

3c9l: STRUCTURE OF GROUND-STATE BOVINE RHODOSPIN IN A HEXAGONAL CRYSTAL FORM
Solved by: X-RAY, Resolution: 3.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

47-351 3c9lA 20%
[Model]

2i37: CRYSTAL STRUCTURE OF A PHOTOACTIVATED RHODOPSIN
Solved by: X-RAY, Resolution: 4.15A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

47-350 2i37B 20%
[Model]
46-353 2i37C 19%
[Model]
45-350 2i37A 19%
[Model]

3pxo: CRYSTAL STRUCTURE OF METARHODOPSIN II
Solved by: X-RAY, Resolution: 4.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

38-350 3pxoA 19%
[Model]

1u19: CRYSTAL STRUCTURE OF BOVINE RHODOPSIN AT 2.2 ANGSTROMS RESOLUTION
Solved by: X-RAY, Resolution: 2.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

46-354 1u19B 19%
[Model]
46-354 1u19A 19%
[Model]

1hod: NMR STRUCTURE OF D130I MUTANT T3-I2, A 32 RESIDUE PEPTIDE FROM THE ALPHA 2A ADRENERGIC RECEPTOR
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

132-163 1hodA 19%
[Model]

1f88: CRYSTAL STRUCTURE OF BOVINE RHODOPSIN
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

46-353 1f88A 19%
[Model]
46-350 1f88B 19%
[Model]

2x72: CRYSTAL STRUCTURE OF THE CONSTITUTIVELY ACTIVE E113Q,N2C, RHODOPSIN MUTANT WITH BOUND GALPHACT PEPTIDE.
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

46-350 2x72A 19%
[Model]

3dqb: CRYSTAL STRUCTURE OF THE ACTIVE G-PROTEIN-COUPLED RECEPTOROPSIN IN COMPLEX WITH A C-TERMINAL PEPTIDE DERIVED FROM THE GALPHA SUBUNIT OF TRANSDUCIN
Solved by: X-RAY, Resolution: 4.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

38-350 3dqbA 19%
[Model]

4a4m: CRYSTAL STRUCTURE OF THE LIGHT-ACTIVATED CONSTITUTIVELY ACN2C,M257Y,D282C RHODOPSIN MUTANT IN COMPLEX WITH A PEPTIDRESEMBLING THE C-TERMINUS OF THE GALPHA-PROTEIN SUBUNIT (
Solved by: X-RAY, Resolution: 3.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

46-350 4a4mA 19%
[Model]

3pqr: CRYSTAL STRUCTURE OF METARHODOPSIN II IN COMPLEX WITH A C-PEPTIDE DERIVED FROM THE GALPHA SUBUNIT OF TRANSDUCIN
Solved by: X-RAY, Resolution: 4.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

38-350 3pqrA 19%
[Model]

2j4y: CRYSTAL STRUCTURE OF A RHODOPSIN STABILIZING MUTANT EXPRESSED IN MAMMALIAN CELLS
Solved by: X-RAY, Resolution: 3.4A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

5-350 2j4yA 19%
[Model]
5-350 2j4yB 19%
[Model]

2ped: CRYSTALLOGRAPHIC MODEL OF 9-CIS-RHODOPSIN
Solved by: X-RAY, Resolution: 2.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

46-354 2pedA 19%
[Model]
46-354 2pedB 19%
[Model]

2g87: CRYSTALLOGRAPHIC MODEL OF BATHORHODOPSIN
Solved by: X-RAY, Resolution: 2.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

46-354 2g87A 19%
[Model]
46-354 2g87B 19%
[Model]

2i36: CRYSTAL STRUCTURE OF TRIGONAL CRYSTAL FORM OF GROUND-STATERHODOPSIN
Solved by: X-RAY, Resolution: 4.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

38-350 2i36A 19%
[Model]
46-346 2i36C 19%
[Model]
48-348 2i36B 19%
[Model]

2lou: AR55 SOLUBILISED IN DPC MICELLES
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-80 2louA 19%
[Model]

2lov: AR55 SOLUBILISED IN LPPG MICELLES
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-80 2lovA 19%
[Model]

2low: SOLUTION STRUCTURE OF AR55 IN 50% HFIP
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-80 2lowA 19%
[Model]

3oax: CRYSTAL STRUCTURE OF BOVINE RHODOPSIN WITH BETA-IONONE
Solved by: X-RAY, Resolution: 2.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

46-354 3oaxB 19%
[Model]
46-354 3oaxA 19%
[Model]

2hpy: CRYSTALLOGRAPHIC MODEL OF LUMIRHODOPSIN
Solved by: X-RAY, Resolution: 2.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

46-354 2hpyB 19%
[Model]
46-354 2hpyA 19%
[Model]

3cap: CRYSTAL STRUCTURE OF NATIVE OPSIN: THE G PROTEIN-COUPLED RECEPTOR RHODOPSIN IN ITS LIGAND-FREE STATE
Solved by: X-RAY, Resolution: 4.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

38-350 3capB 19%
[Model]
38-350 3capA 19%
[Model]

2lot: AR55 SOLUBILISED IN SDS MICELLES
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-80 2lotA 19%
[Model]

1ho9: BEST 20 NMR CONFORMERS OF D130I MUTANT T3-I2, A 32 RESIDUEPEPTIDE FROM THE ALPHA 2A ADRENERGIC RECEPTOR
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

132-163 1ho9A 19%
[Model]

3c9m: STRUCTURE OF A MUTANT BOVINE RHODOPSIN IN HEXAGONAL CRYSTAFORM
Solved by: X-RAY, Resolution: 3.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

47-350 3c9mA 19%
[Model]

3aym: CRYSTAL STRUCTURE OF THE BATHO INTERMEDIATE OF SQUID RHODO
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

34-348 3aymA 22%
[Model]
34-347 3aymB 22%
[Model]
317-354 3aymB 18%
[Model]
317-356 3aymA 18%
[Model]

3ayn: CRYSTAL STRUCTURE OF SQUID ISORHODOPSIN
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

34-348 3aynA 22%
[Model]
34-347 3aynB 22%
[Model]
317-354 3aynB 18%
[Model]
317-356 3aynA 18%
[Model]

2z73: CRYSTAL STRUCTURE OF SQUID RHODOPSIN
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

34-348 2z73A 22%
[Model]
34-347 2z73B 22%
[Model]
317-354 2z73B 18%
[Model]
317-356 2z73A 18%
[Model]

1hzx: CRYSTAL STRUCTURE OF BOVINE RHODOPSIN
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-353 1hzxA 19%
[Model]
6-350 1hzxB 18%
[Model]

1l9h: CRYSTAL STRUCTURE OF BOVINE RHODOPSIN AT 2.6 ANGSTROMS RESOLUTION
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-353 1l9hA 19%
[Model]
6-350 1l9hB 18%
[Model]

4eiy: CRYSTAL STRUCTURE OF THE CHIMERIC PROTEIN OF A2AAR-BRIL INWITH ZM241385 AT 1.8A RESOLUTION
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

44-348 4eiyA 17%
[Model]

4ib4: CRYSTAL STRUCTURE OF THE CHIMERIC PROTEIN OF 5-HT2B-BRIL IWITH ERGOTAMINE
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

52-350 4ib4A 17%
[Model]

3oe6: CRYSTAL STRUCTURE OF THE CXCR4 CHEMOKINE RECEPTOR IN COMPLSMALL MOLECULE ANTAGONIST IT1T IN I222 SPACEGROUP
Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

47-340 3oe6A 17%
[Model]

4djh: STRUCTURE OF THE HUMAN KAPPA OPIOID RECEPTOR IN COMPLEX WI
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

48-346 4djhA 17%
[Model]
48-346 4djhB 17%
[Model]

4dkl: CRYSTAL STRUCTURE OF THE MU-OPIOID RECEPTOR BOUND TO A MORANTAGONIST
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

48-345 4dklA 17%
[Model]

3oe9: CRYSTAL STRUCTURE OF THE CHEMOKINE CXCR4 RECEPTOR IN COMPLSMALL MOLECULE ANTAGONIST IT1T IN P1 SPACEGROUP
Solved by: X-RAY, Resolution: 3.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

47-331 3oe9B 16%
[Model]
47-331 3oe9A 16%
[Model]

3odu: THE 2.5 A STRUCTURE OF THE CXCR4 CHEMOKINE RECEPTOR IN COMSMALL MOLECULE ANTAGONIST IT1T
Solved by: X-RAY, Resolution: 2.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-350 3oduA 16%
[Model]
46-345 3oduB 16%
[Model]

3oe0: CRYSTAL STRUCTURE OF THE CXCR4 CHEMOKINE RECEPTOR IN COMPLCYCLIC PEPTIDE ANTAGONIST CVX15
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-331 3oe0A 16%
[Model]

4ej4: STRUCTURE OF THE DELTA OPIOID RECEPTOR BOUND TO NALTRINDOL
Solved by: X-RAY, Resolution: 3.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

44-339 4ej4A 16%
[Model]

3oe8: CRYSTAL STRUCTURE OF THE CXCR4 CHEMOKINE RECEPTOR IN COMPLSMALL MOLECULE ANTAGONIST IT1T IN P1 SPACEGROUP
Solved by: X-RAY, Resolution: 3.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

48-333 3oe8A 17%
[Model]
42-333 3oe8C 15%
[Model]
48-332 3oe8B 15%
[Model]

4iar: CRYSTAL STRUCTURE OF THE CHIMERIC PROTEIN OF 5-HT1B-BRIL IWITH ERGOTAMINE (PSI COMMUNITY TARGET, E. XU)
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-348 4iarA 14%
[Model]

4iaq: CRYSTAL STRUCTURE OF THE CHIMERIC PROTEIN OF 5-HT1B-BRIL IWITH DIHYDROERGOTAMINE (PSI COMMUNITY TARGET, E. XU)
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-348 4iaqA 14%
[Model]

3uon: STRUCTURE OF THE HUMAN M2 MUSCARINIC ACETYLCHOLINE RECEPTOAN ANTAGONIST
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

47-345 3uonA 14%
[Model]

4daj: STRUCTURE OF THE M3 MUSCARINIC ACETYLCHOLINE RECEPTOR
Solved by: X-RAY, Resolution: 3.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

48-345 4dajD 15%
[Model]
45-343 4dajB 15%
[Model]
45-343 4dajC 15%
[Model]
46-343 4dajA 14%
[Model]

4grv: THE CRYSTAL STRUCTURE OF THE NEUROTENSIN RECEPTOR NTS1 IN NEUROTENSIN (8-13)
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

43-339 4grvA 14%
[Model]

3eml: THE 2.6 A CRYSTAL STRUCTURE OF A HUMAN A2A ADENOSINE RECEPTOR BOUND TO ZM241385.
Solved by: X-RAY, Resolution: 2.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

51-351 3emlA 14%
[Model]

3qak: AGONIST BOUND STRUCTURE OF THE HUMAN ADENOSINE A2A RECEPTO
Solved by: X-RAY, Resolution: 2.71A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

50-349 3qakA 14%
[Model]

3pbl: STRUCTURE OF THE HUMAN DOPAMINE D3 RECEPTOR IN COMPLEX WITETICLOPRIDE
Solved by: X-RAY, Resolution: 2.89A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

51-347 3pblA 13%
[Model]
51-347 3pblB 13%
[Model]

3rze: STRUCTURE OF THE HUMAN HISTAMINE H1 RECEPTOR IN COMPLEX WI
Solved by: X-RAY, Resolution: 3.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

49-346 3rzeA 12%
[Model]

3v2y: CRYSTAL STRUCTURE OF A LIPID G PROTEIN-COUPLED RECEPTOR AT
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-346 3v2yA 11%
[Model]

3v2w: CRYSTAL STRUCTURE OF A LIPID G PROTEIN-COUPLED RECEPTOR AT
Solved by: X-RAY, Resolution: 3.35A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

44-344 3v2wA 11%
[Model]

3vw7: CRYSTAL STRUCTURE OF HUMAN PROTEASE-ACTIVATED RECEPTOR 1 (WITH ANTAGONIST VORAPAXAR AT 2.2 ANGSTROM
Solved by: X-RAY, Resolution: 2.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

46-336 3vw7A 11%
[Model]

2ziy: CRYSTAL STRUCTURE OF SQUID RHODOPSIN
Solved by: X-RAY, Resolution: 3.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-349 2ziyA 22%
[Model]
29-92 2ziyA 9%
[Model]

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Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.




SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.