SWISS-MODEL Repository - Model Details

Model Overview
Click on the bars to get more details about individual Models or experimental structures
1
213

Sequence
UniProt O75251
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

STRING
O75251: 9606.ENSP0000023

Domain
Link to: [ InterPro ]
Oxidored_q6

Model 3D Structure
Model information:
Modelled residue range: 59 to 213
Based on template: [ 4hea ]  
Sequence Identity [%]: 48%
Model date: 2013-04-22
Revision date: 2013-04-01

Quaternary structure information: [details]
Template (4hea): HETERO 16-mer
Model built :SINGLE CHAIN

Ligand information: [details]
Ligands in the template: SF4: 1.
Ligands in the model: SF4: 1
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

Alignment

TARGET    1       RGEYVVAK LDDLVNWARR SSLWPMTFGL ACCAVEMMHM AAPRYDMDRF
4hea6     16      regilftt leklvawgrs nslwpatfgl accaiemmas tdarndlarf
                                                                      
TARGET                  hh hhhhhhhhhh hh sssssss   hhhhhhhh h         
4hea6                   hh hhhhhhhhhh hh sssssss   hhhhhhhh h         


TARGET    49    GVVFRASPRQ SDVMIVAGTL TNKMAPALRK VYDQMPEPRY VVSMGSCANG
4hea6     64    g----asprq advmivagrl skkmapvmrr vweqmpdpkw vismgacass
                                                                      
TARGET                      ssssss  s sshhhhhhhh hhh      s ssssshhhh 
4hea6                       ssssss  s sshhhhhhhh hhh      s ssssshhhh 


TARGET    99    GGYYHYSYSV VRGCDRIVPV DIYIPGCPPT AEALLYGILQ LQRKIKR---
4hea6     115   ggmf-nnyai vqnvdsvvpv dvyvpgcppr pealiyavmq lqkkvrgqay
                                                                      
TARGET                  ss s   hhh     sss        hhhhhhhhh hhhhh     
4hea6                   ss s   hhh     sss        hhhhhhhhh hhhhh   ss


TARGET    146   ------ERRL QIWYRR -                                   
4hea6     164   nergerlppv aawkrtrg                                   
                                                                      
TARGET                                                                
4hea6           s   sss                                               



Quality


Template's ligands section
Ligands in the template: SF4: 1.
Ligands in the template that will be assessed: SF4201.
Model's ligands section
SF4201
All the residues interacting with the ligand are completely conserved between model and template.
The RMSD between the interacting residues of model and template is smaller than 2 Angstrom: 0.020
Given the properties calculated previously, the ligand G.SF4201 will be included in the model.
SF4201: conservation:True, RMSD:True, included: True

The new model with the included ligands was saved successfully.


Quaternary Structure Annotation of the Template
4hea is annotated as HETERO 16-mer
The oligomeric state of the structure was assigned by the authors of the corresponding PDB entry
The following biological unit was used to build the template structure: 4hea.pdb1.gz

Quaternary Structure Modelling of the Target Protein
4hea_1


Template Selection
 - Start SMR-Pipeline for:4c2c0912bb105cd96200363ed8803db4 on BC2-cluster at Mon Apr 22 09:04:31
2013 


 - Found BLAST templates: 17
 - No templates found with BLAST (seqid-cutoff: 60): go to HHSEARCH

 - No A3m found

 - Run HHSearch to detect more templates...
 - Generate new template library
 - Run template selection against modfied template library 
 - Summarize templates: 
 - No template with J found
 - No template with I found
 - No template with H found
 - No template with L found
 - No template with L found
 - No template with L found
 - No template with A found
 - No template with C found
 - No template with L found
 - No template with B found
 - No template with L found
 - No template with L found
 - No template with L found
 - No template with M found
 - No template with L found
 - No template with L found
 - No template with L found
 - No template with L found
 - No template with A found
 - No template with C found
 - No template with 1 found
 - No template with 2 found
 - No template with 3 found
 - No template with 4 found
 - No template with 5 found
 - No template with 9 found
 - No template with 7 found
 - No template with J found
 - No template with K found
 - No template with L found
 - No template with M found
 - No template with N found
 - No template with P found
 - No template with Q found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with D found
 - No template with E found
 - No template with G found
 - No template with H found
 - No template with S found
 - No template with T found
 - No template with U found
 - No template with V found
 - No template with W found
 - No template with Y found
 - No template with Z found
 - No template with L found
 - No template with I found
 - No template with H found
 - No template with L found
 - No template with F found
 - No template with B found
 - No template with H found
 - No template with D found
 - No template with 1 found
 - No template with 2 found
 - No template with 3 found
 - No template with 4 found
 - No template with 5 found
 - No template with 9 found
 - No template with 7 found
 - No template with J found
 - No template with K found
 - No template with L found
 - No template with M found
 - No template with N found
 - No template with P found
 - No template with Q found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with D found
 - No template with E found
 - No template with G found
 - No template with H found
 - No template with S found
 - No template with T found
 - No template with U found
 - No template with V found
 - No template with W found
 - No template with Y found
 - No template with Z found
 - No template with L found
 - No template with L found
 - No template with B found
 - No template with D found
 - No template with M found
 - No template with L found
 - No template with D found
 - No template with B found
 - No template with A found
 - No template with M found
 - No template with L found
 - No template with B found
 - No template with K found
 - No template with J found
 - No template with J found
 - No template with F found
 - No template with B found
 - No template with L found
 - No template with H found
 - No template with D found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with D found
 - No template with E found
 - No template with G found
 - No template with H found
 - No template with 1 found
 - No template with 2 found
 - No template with 3 found
 - No template with 4 found
 - No template with 5 found
 - No template with 9 found
 - No template with 7 found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with D found
 - No template with E found
 - No template with G found
 - No template with J found
 - No template with O found
 - No template with P found
 - No template with Q found
 - No template with S found
 - No template with T found
 - No template with 1 found
 - No template with 2 found
 - No template with 3 found
 - No template with 4 found
 - No template with 5 found
 - No template with 9 found
 - No template with 7 found
 - No template with L found
 - No template with M found
 - No template with N found
 - No template with R found
 - No template with H found
 - No template with L found
 - No template with I found
 - No template with H found
 - No template with K found
 - No template with N found
 - No template with M found
 - No template with J found
 - No template with S found
 - No template with R found
 - No template with Q found
 - No template with L found
 - No template with L found
 - No template with A found
 - No template with C found
 - No template with S found
 - No template with Q found
 - No template with R found
 - No template with M found
 - No template with L found
 - No template with L found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with D found
 - No template with E found
 - No template with G found
 - No template with H found
 - No template with 1 found
 - No template with 2 found
 - No template with 3 found
 - No template with 4 found
 - No template with 5 found
 - No template with 9 found
 - No template with 7 found
 - No template with S found
 - No template with R found
 - No template with Q found
 - No template with L found
 - No template with 1 found
 - No template with 2 found
 - No template with 3 found
 - No template with 4 found
 - No template with 5 found
 - No template with 9 found
 - No template with 7 found
 - No template with W found
 - No template with A found
 - No template with J found
 - No template with K found
 - No template with L found
 - No template with M found
 - No template with N found
 - No template with H found
 - No template with B found
 - No template with C found
 - No template with D found
 - No template with E found
 - No template with F found
 - No template with O found
 - No template with I found
 - No template with X found
 - No template with P found
 - No template with R found
 - No template with S found
 - No template with T found
 - No template with U found
 - No template with V found
 - No template with Q found
 - Warning: Oligomer Prediction was not successfull!

 - Send 1 Templates for modeling

 - @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@
 -                       **********************************************************
 - building model based on 4hea6 (59-213) was successful 
 - Repository Pipeline parameter

   Cut-off parameters to model the target based on a BLAST target-template alignment
    Evalue :                                     0.0001
    Minimum Template size (aa) for ranking :     25
    Minimum Sequence identity :                  60

   Cut-off parameters to model the target based on a HHSearch target-template alignment
    Evalue :                                     0.0001
    Probability :                                50
    MAC :                                        0.3

   Parameters for model selection
    Minimal number of uncovered target
     residues after BLAST to run HHSEARCH :      50
    Minimal number of uncovered target
     residues to model an additional template :  25
    
 - Finish SMR-Pipeline for:4c2c0912bb105cd96200363ed8803db4 on BC2-cluster at Mon Apr 22 09:19:17
2013 




Template Description
Match Chain SeqId

4hea: CRYSTAL STRUCTURE OF THE ENTIRE RESPIRATORY COMPLEX I FROMTHERMOPHILUS
Solved by: X-RAY, Resolution: 3.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

59-213 4heaG 49%
[Model]
59-213 4hea6 49%
[Model]

3iam: CRYSTAL STRUCTURE OF THE HYDROPHILIC DOMAIN OF RESPIRATORYCOMPLEX I FROM THERMUS THERMOPHILUS, REDUCED, 2 MOL/ASU, WITH BOUND NADH
Solved by: X-RAY, Resolution: 19.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

59-206 3iam6 47%
[Model]
59-206 3iamF 47%
[Model]

2fug: CRYSTAL STRUCTURE OF THE HYDROPHILIC DOMAIN OF RESPIRATORYCOMPLEX I FROM THERMUS THERMOPHILUS
Solved by: X-RAY, Resolution: 19.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

59-206 2fug6 47%
[Model]
59-206 2fugF 47%
[Model]
59-206 2fugO 47%
[Model]
59-206 2fugX 47%
[Model]

3i9v: CRYSTAL STRUCTURE OF THE HYDROPHILIC DOMAIN OF RESPIRATORYCOMPLEX I FROM THERMUS THERMOPHILUS, OXIDIZED, 2 MOL/ASU
Solved by: X-RAY, Resolution: 4.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

59-207 3i9v6 47%
[Model]
59-207 3i9vF 47%
[Model]

3ias: CRYSTAL STRUCTURE OF THE HYDROPHILIC DOMAIN OF RESPIRATORYCOMPLEX I FROM THERMUS THERMOPHILUS, OXIDIZED, 4 MOL/ASU,RE-REFINED TO 3.15 ANGSTROM RESOLUTION
Solved by: X-RAY, Resolution: 4.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

59-207 3ias6 47%
[Model]
59-207 3iasF 47%
[Model]
59-207 3iasO 47%
[Model]
59-207 3iasX 47%
[Model]

2ybb: FITTED MODEL FOR BOVINE MITOCHONDRIAL SUPERCOMPLEX I1III2SINGLE PARTICLE CRYO-EM (EMD-1876)
Solved by: X-RAY, Resolution: 19.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

59-206 2ybb6 47%
[Model]

3m9s: CRYSTAL STRUCTURE OF RESPIRATORY COMPLEX I FROM THERMUS TH
Solved by: X-RAY, Resolution: 4.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

59-207 3m9s6 47%
[Model]
59-207 3m9sF 47%
[Model]

3cur: STRUCTURE OF A DOUBLE METHIONINE MUTANT OF NI-FE HYDROGENA
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

75-200 3curA 15%
[Model]
75-200 3curB 15%
[Model]
75-200 3curC 16%
[Model]

3myr: CRYSTAL STRUCTURE OF [NIFE] HYDROGENASE FROM ALLOCHROMATIUITS NI-A STATE
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

78-197 3myrA 16%
[Model]
77-198 3myrC 15%
[Model]
78-197 3myrE 16%
[Model]
78-197 3myrG 16%
[Model]

3h3x: STRUCTURE OF THE V74M LARGE SUBUNIT MUTANT OF NI-FE HYDROGENASE IN AN OXIDIZED STATE
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

75-200 3h3xA 15%
[Model]
75-200 3h3xB 15%
[Model]
75-200 3h3xC 16%
[Model]

3rgw: CRYSTAL STRUCTURE AT 1.5 A RESOLUTION OF AN H2-REDUCED, O2HYDROGENASE FROM RALSTONIA EUTROPHA UNMASKS A NOVEL IRON-CLUSTER
Solved by: X-RAY, Resolution: 1.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

75-199 3rgwS 16%
[Model]

1yqw: STRUCTURE OF THE OXIDIZED UNREADY FORM OF NI-FE HYDROGENAS
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

75-200 1yqwA 15%
[Model]
75-200 1yqwB 15%
[Model]
75-200 1yqwC 16%
[Model]

3cus: STRUCTURE OF A DOUBLE ILE/PHE MUTANT OF NI-FE HYDROGENASE REFINED AT 2.2 ANGSTROM RESOLUTION
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

75-200 3cusA 15%
[Model]
75-200 3cusB 15%
[Model]
75-200 3cusC 16%
[Model]

1ubr: THREE-DIMENSIONAL STRUCTURE OF THE CARBON MONOXIDE COMPLEXOF [NIFE]HYDROGENASE FROM DESULUFOVIBRIO VULGARIS MIYAZAKF
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

73-198 1ubrS 15%
[Model]

1ubu: THREE-DIMENSIONAL STRUCTURE OF THE CARBON MONOXIDE COMPLEXOF [NIFE]HYDROGENASE FROM DESULUFOVIBRIO VULGARIS MIYAZAKF
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

73-198 1ubuS 15%
[Model]

1h2a: SINGLE CRYSTALS OF HYDROGENASE FROM DESULFOVIBRIO VULGARIS
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

73-198 1h2aS 15%
[Model]

1wuk: HIGH RESOLUTION STRUCTURE OF THE OXIDIZED STATE OF [NIFE]HYDROGENASE FROM DESULUFOVIBRIO VULGARIS MIYAZAKI F
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

73-198 1wukS 15%
[Model]

1ubh: THREE-DIMENSIONAL STRUCTURE OF THE CARBON MONOXIDE COMPLEXOF [NIFE]HYDROGENASE FROM DESULUFOVIBRIO VULGARIS MIYAZAKF
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

73-198 1ubhS 15%
[Model]

1wul: HIGH RESOLUTION STRUCTURE OF THE REDUCED STATE OF [NIFE]HYDROGENASE FROM DESULUFOVIBRIO VULGARIS MIYAZAKI F
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

73-198 1wulS 15%
[Model]

1wui: ULTRA-HIGH RESOLUTION STRUCTURE OF THE NI-A STATE OF [NIFE]HYDROGENASE FROM DESULUFOVIBRIO VULGARIS MIYAZAKI F
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

73-198 1wuiS 15%
[Model]

3ayz: MEMBRANE-BOUND RESPIRATORY [NIFE] HYDROGENASE FROM HYDROGEMARINUS IN AN AIR-OXIDIZED CONDITION
Solved by: X-RAY, Resolution: 1.32A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

75-199 3ayzB 15%
[Model]
75-199 3ayzD 15%
[Model]

1ubl: THREE-DIMENSIONAL STRUCTURE OF THE CARBON MONOXIDE COMPLEXOF [NIFE]HYDROGENASE FROM DESULUFOVIBRIO VULGARIS MIYAZAKF
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

73-198 1ublS 15%
[Model]

3ayy: MEMBRANE-BOUND RESPIRATORY [NIFE] HYDROGENASE FROM HYDROGEMARINUS IN A FERRICYANIDE-OXIDIZED CONDITION
Solved by: X-RAY, Resolution: 1.32A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

75-199 3ayyB 15%
[Model]
75-199 3ayyD 15%
[Model]

3ayx: MEMBRANE-BOUND RESPIRATORY [NIFE] HYDROGENASE FROM HYDROGEMARINUS IN AN H2-REDUCED CONDITION
Solved by: X-RAY, Resolution: 1.32A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

75-199 3ayxB 15%
[Model]
75-199 3ayxD 15%
[Model]

1ubo: THREE-DIMENSIONAL STRUCTURE OF THE CARBON MONOXIDE COMPLEXOF [NIFE]HYDROGENASE FROM DESULUFOVIBRIO VULGARIS MIYAZAKF
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

73-198 1uboS 15%
[Model]

1wuh: THREE-DIMENSIONAL STRUCTURE OF THE NI-A STATE OF [NIFE]HYDROGENASE FROM DESULUFOVIBRIO VULGARIS MIYAZAKI F
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

73-198 1wuhS 15%
[Model]

1frf: CRYSTAL STRUCTURE OF THE NI-FE HYDROGENASE FROM DESULFOVIBRIO FRUCTOSOVORANS
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

75-199 1frfS 15%
[Model]

1e3d: [NIFE] HYDROGENASE FROM DESULFOVIBRIO DESULFURICANS ATCC 27774
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

74-199 1e3dA 15%
[Model]
74-199 1e3dC 15%
[Model]

1ubm: THREE-DIMENSIONAL STRUCTURE OF THE CARBON MONOXIDE COMPLEXOF [NIFE]HYDROGENASE FROM DESULUFOVIBRIO VULGARIS MIYAZAKF
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

73-198 1ubmS 15%
[Model]

1yrq: STRUCTURE OF THE READY OXIDIZED FORM OF [NIFE]-HYDROGENASE
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

75-199 1yrqA 15%
[Model]
75-199 1yrqB 15%
[Model]
75-199 1yrqC 15%
[Model]
75-199 1yrqD 15%
[Model]
75-199 1yrqF 15%
[Model]
75-199 1yrqG 15%
[Model]

1wuj: THREE-DIMENSIONAL STRUCTURE OF THE NI-B STATE OF [NIFE]HYDROGENASE FROM DESULUFOVIBRIO VULGARIS MIYAZAKI F
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

73-198 1wujS 15%
[Model]

1ubk: THREE-DIMENSIONAL STRUCTURE OF THE CARBON MONOXIDE COMPLEXOF [NIFE]HYDROGENASE FROM DESULUFOVIBRIO VULGARIS MIYAZAKF
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

73-198 1ubkS 15%
[Model]

1h2r: THREE-DIMENSIONAL STRUCTURE OF NI-FE HYDROGENASE FROM DESULFIVIBRIO VULGARIS MIYAZAKI F IN THE REDUCED FORM AT 1.4 A RESOLUTION
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

73-198 1h2rS 15%
[Model]

1ubt: THREE-DIMENSIONAL STRUCTURE OF THE CARBON MONOXIDE COMPLEXOF [NIFE]HYDROGENASE FROM DESULUFOVIBRIO VULGARIS MIYAZAKF
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

73-198 1ubtS 15%
[Model]

1ubj: THREE-DIMENSIONAL STRUCTURE OF THE CARBON MONOXIDE COMPLEXOF [NIFE]HYDROGENASE FROM DESULUFOVIBRIO VULGARIS MIYAZAKF
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

73-198 1ubjS 15%
[Model]

1yq9: STRUCTURE OF THE UNREADY OXIDIZED FORM OF [NIFE] HYDROGENA
Solved by: X-RAY, Resolution: 2.35A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

75-198 1yq9A 14%
[Model]
75-198 1yq9B 14%
[Model]

1cc1: CRYSTAL STRUCTURE OF A REDUCED, ACTIVE FORM OF THE NI-FE-SHYDROGENASE FROM DESULFOMICROBIUM BACULATUM
Solved by: X-RAY, Resolution: 2.15A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

78-201 1cc1S 14%
[Model]

1frv: CRYSTAL STRUCTURE OF THE OXIDIZED FORM OF NI-FE HYDROGENAS
Solved by: X-RAY, Resolution: 2.85A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

75-198 1frvA 14%
[Model]
75-198 1frvC 14%
[Model]

2frv: CRYSTAL STRUCTURE OF THE OXIDIZED FORM OF NI-FE HYDROGENAS
Solved by: X-RAY, Resolution: 2.54A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

75-198 2frvS 14%
[Model]
75-198 2frvA 14%
[Model]
75-198 2frvC 14%
[Model]
75-198 2frvE 14%
[Model]
75-198 2frvG 14%
[Model]
75-198 2frvI 14%
[Model]

3uqy: H2-REDUCED STRUCTURE OF E. COLI HYDROGENASE-1
Solved by: X-RAY, Resolution: 2.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

77-198 3uqyT 13%
[Model]
77-198 3uqyS 13%
[Model]

3usc: CRYSTAL STRUCTURE OF E. COLI HYDROGENASE-1 IN A FERRICYANIFORM
Solved by: X-RAY, Resolution: 2.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

77-198 3uscT 13%
[Model]
77-198 3uscS 13%
[Model]

3use: CRYSTAL STRUCTURE OF E. COLI HYDROGENASE-1 IN ITS AS-ISOLA
Solved by: X-RAY, Resolution: 1.67A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

77-198 3useS 13%
[Model]
77-198 3useT 13%
[Model]

4gd3: STRUCTURE OF E. COLI HYDROGENASE-1 IN COMPLEX WITH CYTOCHR
Solved by: X-RAY, Resolution: 3.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

75-198 4gd3S 14%
[Model]
77-198 4gd3T 13%
[Model]
75-198 4gd3Q 14%
[Model]
77-198 4gd3R 13%
[Model]

2wpn: STRUCTURE OF THE OXIDISED, AS-ISOLATED NIFESE HYDROGENASE FROM D. VULGARIS HILDENBOROUGH
Solved by: X-RAY, Resolution: 2.04A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

77-199 2wpnA 12%
[Model]

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Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.




SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.