SWISS-MODEL Repository - Model Details

Model Overview
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Sequence
UniProt O88572
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
Ldl_recept_a
Ldl_recept_a
Ldl_recept_a
Ldl_recept_b
Ldl_recept_b
Ldl_recept_b
Ldl_recept_b
Ldl_recept_b
Ldl_recept_b
Ldl_recept_b
Ldl_recept_b
Ldl_recept_b
Ldl_recept_b
Ldl_recept_b
Ldl_recept_b
Ldl_recept_b

Model 3D Structure
Model information:
Modelled residue range: 20 to 635
Based on template: [ 4dg6 ]  
Sequence Identity [%]: 97%
Model date: 2013-05-07
Revision date: 2013-04-01

Quaternary structure information: [details]
Template (4dg6): MONOMER
Model built: SINGLE CHAIN

Ligand information: [details]
Ligands in the template: PO4: 2.
Ligands in the model: none.
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

Alignment 

TARGET    1       APLLLYAN RRDLRLVDAT NGKENATIVV GGLEDAAAVD FVFGHGLIYW
4dg6A     1       aplllyan rrdlrlvdat ngkenativv ggledaaavd fvfshgliyw
                                                                      
TARGET              ssssss   sssss          sss      ssssss sss  sssss
4dg6A               ssssss   sssss          sss      ssssss sss  sssss


TARGET    49    SDVSEEAIKR TEFNKSESVQ NVVVSGLLSP DGLACDWLGE KLYWTDSETN
4dg6A     49    sdvseeaikr tefnktesvq nvvvsgllsp dglacdwlge klywtdsetn
                                                                      
TARGET          sss   ssss sss      s ss          sssss     ssssss    
4dg6A           sss   ssss sss      s ss          sssss     ssssss    


TARGET    99    RIEVSNLDGS LRKVLFWQEL DQPRAIALDP SSGFMYWTDW GEVPKIERAG
4dg6A     99    rievsnldgs lrkvlfwqel dqpraialdp ssgfmywtdw gevpkierag
                                                                      
TARGET          sssss        sss          sssss    ssssssss s ssssssss
4dg6A           sssss        sss          sssss    ssssssss s ssssssss


TARGET    149   MDGSSRFVII NTEIYWPNGL TLDYQERKLY WADAKLNFIH KSNLDGTNRQ
4dg6A     149   mdgssrfiii nseiywpngl tldyeeqkly wadaklnfih ksnldgtnrq
                                                                      
TARGET          s     sss       sssss sss    sss ssss    ss ss       s
4dg6A           s     sss       sssss sss    sss ssss    ss ss       s


TARGET    199   AVVKGSLPHP FALTLFEDTL YWTDWNTHSI LACNKYTGEG LREIHSNIFS
4dg6A     199   avvkgslphp faltlfedil ywtdwsthsi lacnkytgeg lreihsdifs
                                                                      
TARGET          ss          sssss sss sssss  sss sssss       sss      
4dg6A           ss          sssss sss sssss  sss sssss       sss      


TARGET    249   PMDIHAFSQQ RQPNATNPCG IDNGGCSHLC LMSPVKPFYQ CACPTGVKLM
4dg6A     249   pmdihafsqq rqpnatnpcg idnggcshlc lmspvkpfyq cacptgvkll
                                                                      
TARGET            sssss                       ss sss    sss ss     sss
4dg6A             sssss                       ss sss    sss ss     sss


TARGET    299   ENGKTCKDGA TELLLLARRT DLRRISLDTP DFTDIVLQLE DIRHAIAIDY
4dg6A     299   engktckdga tellllarrt dlrrisldtp dftdivlqle dirhaiaidy
                                                                      
TARGET              sss    sssssssss  sssss                    sssssss
4dg6A               sss    sssssssss  sssss                    sssssss


TARGET    349   DPVEGYIYWT DDEVRAIRRS FIDGSGSQFV VTAQIAHPDG IAVDWVARNL
4dg6A     349   dpvegyiywt ddevrairrs fidgsgsqfv vtaqiahpdg iavdwvarnl
                                                                      
TARGET          s    sssss ss   sssss        sss          s ssss   sss
4dg6A           s    sssss ss   sssss        sss          s ssss    ss


TARGET    399   YWTDTGTDRI EVTRLNGTMR KILISEDLEE PRAIVLDPMV GYMYWTDWGE
4dg6A     399   ywtdtgtdri evtrlngtmr kilisedlee praivldpmv gymywtdwge
                                                                      
TARGET          ssss    ss sssss      sss      s sssssss    ssssssss  
4dg6A           ssss    ss sss        sss      s sssssss    ssssssss  


TARGET    449   IPKIERAALD GSDRVVLVNT SLGWPNGLAL DYDEGTIYWG DAKTDKIEVM
4dg6A     449   ipkieraald gsdrvvlvnt slgwpnglal dydegkiywg daktdkievm
                                                                      
TARGET            sssssss      sss       sssssss ss  ssssss ss  ssssss
4dg6A              ssssss      sss       sssssss ss  ssssss ss  ssssss


TARGET    499   NTDGTGRRVL VEDKIPHIFG FTLLGDYVYW TDWQRRSIER VHKRSAEREV
4dg6A     499   ntdgtgrrvl vedkiphifg ftllgdyvyw tdwqrrsier vhkrsaerev
                                                                      
TARGET          ss     sss sss      s ssss sssss ss   sssss sss   ssss
4dg6A           ss     sss sss      s ssss sssss ss   sssss sss   ssss


TARGET    549   IIDQLPDLMG LKATSVHRVI GSNPCAEDNG GCSHLCLYRP QGLRCACPIG
4dg6A     549   iidqlpdlmg lkatnvhrvi gsnpcaeeng gcshlclyrp qglrcacpig
                                                                      
TARGET          ssss  ssss ssssss                    sssss   sssss    
4dg6A           ssss  ssss ssssss                    sssss   sssss    


TARGET    599   FELIGDMKTC IVPEAFLL                                   
4dg6A     599   felisdmktc ivpeafll-                                  
                                                                      
TARGET           sss    ss s                                          
4dg6A            sss    ss s

Quality 


Template's ligands section 
Ligands in the template: PO4: 2. 
The template contains ligands that are not yet part of the pipeline. Ligands which are currently assessed are listed in the help page. 
No ligands were included in the model.

 
Quaternary Structure Annotation of the Template 
 4dg6 is annotated as MONOMER 
 The oligomeric state of the structure was assigned by the authors of the corresponding PDB entry 
 The following biological unit was used to build the template structure: 4dg6.pdb1.gz 
      
 
Quaternary Structure Modelling of the Target Protein 
 Analysis of evolutionary and family specific aspects revealed non-conservation of the oligomeric structure 
 Hence, the oligomeric structures of the target and the template cannot be assumed to be similar (=MONOMER) 
 The target structure was calculated as SINGLE CHAIN 
 The corresponding reliability score is 0.118 (>0.5 indicates similarity)

Template Selection 
 - Start SMR-Pipeline for:a826828b6221b1027e2994b173f8d3e8 on BC2-cluster at Tue May  7 18:11:45
2013 


 - Analyze BLAST summary ... 
 - Blast template search was successfull, number of templates selected for modeling:  2
 - But still uncovered regions of the target sequence detected, go for: HHSEARCH

 - Run HHSearch to detect more templates...
FATAL - No md5 found in hash for: 4gncA
FATAL - No md5 found in hash for: 4gncA
FATAL - No md5 found in hash for: 4gnbB
FATAL - No md5 found in hash for: 4gnbA
FATAL - No md5 found in hash for: 4gn8A
FATAL - No md5 found in hash for: 4gn8B
FATAL - No md5 found in hash for: 4gncB
FATAL - No md5 found in hash for: 4gnaB
FATAL - No md5 found in hash for: 4gnaA
FATAL - No md5 found in hash for: 4gn7B
FATAL - No md5 found in hash for: 4gn7A
FATAL - No md5 found in hash for: 4gn9B
FATAL - No md5 found in hash for: 4gn9A
FATAL - No md5 found in hash for: 4gncA
FATAL - No md5 found in hash for: 4gncA
FATAL - No md5 found in hash for: 4gnbB
FATAL - No md5 found in hash for: 4gnbA
FATAL - No md5 found in hash for: 4gn8A
FATAL - No md5 found in hash for: 4gn8B
FATAL - No md5 found in hash for: 4gncB
FATAL - No md5 found in hash for: 4gnaB
FATAL - No md5 found in hash for: 4gnaA
FATAL - No md5 found in hash for: 4gn7B
FATAL - No md5 found in hash for: 4gn7A
FATAL - No md5 found in hash for: 4gn9B
FATAL - No md5 found in hash for: 4gn9A
FATAL - No md5 found in hash for: 4gncA
FATAL - No md5 found in hash for: 4gncA
FATAL - No md5 found in hash for: 4gnbB
FATAL - No md5 found in hash for: 4gnbA
FATAL - No md5 found in hash for: 4gn8A
FATAL - No md5 found in hash for: 4gn8B
FATAL - No md5 found in hash for: 4gncB
FATAL - No md5 found in hash for: 4gnaB
FATAL - No md5 found in hash for: 4gnaA
FATAL - No md5 found in hash for: 4gn7B
FATAL - No md5 found in hash for: 4gn7A
FATAL - No md5 found in hash for: 4gn9B
FATAL - No md5 found in hash for: 4gn9A
FATAL - No md5 found in hash for: 4gncA
FATAL - No md5 found in hash for: 4gncA
FATAL - No md5 found in hash for: 4gnbB
FATAL - No md5 found in hash for: 4gnbA
FATAL - No md5 found in hash for: 4gn8A
FATAL - No md5 found in hash for: 4gn8B
FATAL - No md5 found in hash for: 4gncB
FATAL - No md5 found in hash for: 4gnaB
FATAL - No md5 found in hash for: 4gnaA
FATAL - No md5 found in hash for: 4gn7B
FATAL - No md5 found in hash for: 4gn7A
FATAL - No md5 found in hash for: 4gn9B
FATAL - No md5 found in hash for: 4gn9A
FATAL - No md5 found in hash for: 4gncA
FATAL - No md5 found in hash for: 4gncA
FATAL - No md5 found in hash for: 4gnbB
FATAL - No md5 found in hash for: 4gnbA
FATAL - No md5 found in hash for: 4gn8A
FATAL - No md5 found in hash for: 4gn8B
FATAL - No md5 found in hash for: 4gncB
FATAL - No md5 found in hash for: 4gnaB
FATAL - No md5 found in hash for: 4gnaA
FATAL - No md5 found in hash for: 4gn7B
FATAL - No md5 found in hash for: 4gn7A
FATAL - No md5 found in hash for: 4gn9B
FATAL - No md5 found in hash for: 4gn9A
FATAL - No md5 found in hash for: 4gncA
FATAL - No md5 found in hash for: 4gncA
FATAL - No md5 found in hash for: 4gnbB
FATAL - No md5 found in hash for: 4gnbA
FATAL - No md5 found in hash for: 4gn8A
FATAL - No md5 found in hash for: 4gn8B
FATAL - No md5 found in hash for: 4gncB
FATAL - No md5 found in hash for: 4gnaB
FATAL - No md5 found in hash for: 4gnaA
FATAL - No md5 found in hash for: 4gn7B
FATAL - No md5 found in hash for: 4gn7A
FATAL - No md5 found in hash for: 4gn9B
FATAL - No md5 found in hash for: 4gn9A
FATAL - No md5 found in hash for: 4gncA
FATAL - No md5 found in hash for: 4gncA
FATAL - No md5 found in hash for: 4gnbB
FATAL - No md5 found in hash for: 4gnbA
FATAL - No md5 found in hash for: 4gn8A
FATAL - No md5 found in hash for: 4gn8B
FATAL - No md5 found in hash for: 4gncB
FATAL - No md5 found in hash for: 4gnaB
FATAL - No md5 found in hash for: 4gnaA
FATAL - No md5 found in hash for: 4gn7B
FATAL - No md5 found in hash for: 4gn7A
FATAL - No md5 found in hash for: 4gn9B
FATAL - No md5 found in hash for: 4gn9A
FATAL - No md5 found in hash for: 4gncA
FATAL - No md5 found in hash for: 4gncA
FATAL - No md5 found in hash for: 4gnbB
FATAL - No md5 found in hash for: 4gnbA
FATAL - No md5 found in hash for: 4gn8A
FATAL - No md5 found in hash for: 4gn8B
FATAL - No md5 found in hash for: 4gncB
FATAL - No md5 found in hash for: 4gnaB
FATAL - No md5 found in hash for: 4gnaA
FATAL - No md5 found in hash for: 4gn7B
FATAL - No md5 found in hash for: 4gn7A
FATAL - No md5 found in hash for: 4gn9B
FATAL - No md5 found in hash for: 4gn9A
FATAL - No md5 found in hash for: 4gncA
FATAL - No md5 found in hash for: 4gncA
FATAL - No md5 found in hash for: 4gnbB
FATAL - No md5 found in hash for: 4gnbA
FATAL - No md5 found in hash for: 4gn8A
FATAL - No md5 found in hash for: 4gn8B
FATAL - No md5 found in hash for: 4gncB
FATAL - No md5 found in hash for: 4gnaB
FATAL - No md5 found in hash for: 4gnaA
FATAL - No md5 found in hash for: 4gn7B
FATAL - No md5 found in hash for: 4gn7A
FATAL - No md5 found in hash for: 4gn9B
FATAL - No md5 found in hash for: 4gn9A
 - Generate new template library
 - Run template selection against modified template library 
 - Summarize templates: 
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 - Proof template(s) selection compared to previous Repository update
 - Different number of templates selected (old0 vs new:12): model based on new templates
 - Send 12 Templates for modeling

 - @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@
 -  *******************************
 - building model based on 4dg6A (20-635) was successful 
 -                                *******************************
 - building model based on 3s2kB (630-1246) was successful 
 -                                                                 **
 - building model based on 1ajjA (1288-1322) was successful 
 -                 ******************************
 - building model based on 3s94A (330-932) was not successful go to next best template
 -                 ******************************
 - building model based on 3s94B (331-929) was not successful go to next best template
 -                 ******************************
 - building model based on 4dg6A (330-937) was not successful go to next best template
 -                 ******************************
 - building model based on 4dg6A (328-937) was not successful go to next best template
 -                                                               ****
 - building model based on 2fyjA (1248-1322) was not successful go to next best template
 -                                                               ****
 - building model based on 2fylB (1248-1322) was successful 
 -                               ****************
 - building model based on 3v64D (599-920) was successful 
 -                 ******************************
 - building model based on 3s94A (329-932) was successful 
 -                                                                 ****
 - building model based on 2fyjA (1288-1360) was not successful go to next best template
 -                                                                 ****
 - building model based on 2fylB (1288-1360) was successful 
 -                                                               ******
 - building model based on 1n7dA (1244-1357) was successful 
 -                                                            ********
 - building model based on 1n7dA (1196-1360) was not successful go to next best template
 -                                   *******************************
 - building model based on 4dg6A (676-1302) was not successful go to next best template
 -                                   *******************************
 - building model based on 3s94A (684-1302) was not successful go to next best template
 -        ***********************************
 - building model based on 3s94A (135-843) was not successful go to next best template
 -        ***********************************
 - building model based on 3s94B (133-843) was not successful go to next best template
 -      ************************************
 - building model based on 4dg6A (109-843) was not successful go to next best template
 -      ************************************
 - building model based on 3s8vA (109-825) was successful 
 -    *************************************
 - building model based on 3s2kA (62-797) was not successful go to next best template
 -                   ***************************************
 - building model based on 3s2kB (371-1155) was not successful go to next best template
 -                   ***************************************
 - building model based on 3s2kA (371-1154) was not successful go to next best template
 -                   ***************************************
 - building model based on 4dg6A (373-1155) was successful 
 - Repository Pipeline parameter

   Cut-off parameters to model the target based on a BLAST target-template alignment
    Evalue :                                     0.0001
    Minimum Template size (aa) for ranking :     25
    Minimum Sequence identity :                  60

   Cut-off parameters to model the target based on a HHSearch target-template alignment
    Evalue :                                     0.0001
    Probability :                                50
    MAC :                                        0.3

   Parameters for model selection
    Minimal number of uncovered target
     residues after BLAST to run HHSEARCH :      50
    Minimal number of uncovered target
     residues to model an additional template :  25
    
 - Finish SMR-Pipeline for:a826828b6221b1027e2994b173f8d3e8 on BC2-cluster at Tue May  7 19:46:41
2013


Template Description
Match Chain SeqId

2lgp: SOLUTION STRUCTURE OF LA45 FROM LDLR
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1246-1324 2lgpA 41%
[Model]
1288-1362 2lgpA 33%
[Model]

2fcw: STRUCTURE OF A COMPLEX BETWEEN THE PAIR OF THE LDL RECEPTOLIGAND-BINDING MODULES 3-4 AND THE RECEPTOR ASSOCIATED PROTEIN (RAP).
Solved by: X-RAY, Resolution: 1.26A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1248-1323 2fcwB 40%
[Model]
1286-1362 2fcwB 35%
[Model]

2fyl: HADDOCK MODEL OF THE COMPLEX BETWEEN DOUBLE MODULE OF LRP,CR56, AND FIRST DOMAIN OF RECEPTOR ASSOCIATED PROTEIN, RAD1.
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1246-1323 2fylB 40%
[Model]
1286-1361 2fylB 39%
[Model]

2fyj: NMR SOLUTION STRUCTURE OF CALCIUM-LOADED LRP DOUBLE MODULE
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1246-1323 2fyjA 40%
[Model]
1286-1361 2fyjA 39%
[Model]

1f5y: NMR STRUCTURE OF A CONCATEMER OF THE FIRST AND SECOND LIGAND-BINDING MODULES OF THE HUMAN LDL RECEPTOR
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1246-1322 1f5yA 35%
[Model]
1286-1360 1f5yA 38%
[Model]

2xrc: HUMAN COMPLEMENT FACTOR I
Solved by: X-RAY, Resolution: 2.69A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1251-1324 2xrcA 39%
[Model]
1288-1367 2xrcA 34%
[Model]
1249-1364 2xrcB 24%
[Model]
1249-1324 2xrcB 37%
[Model]
1286-1365 2xrcC 34%
[Model]
1262-1364 2xrcD 26%
[Model]

3s2k: STRUCTURAL BASIS OF WNT SIGNALING INHIBITION BY DICKKOPF BLRP5/6.
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

109-559 3s2kA 18%
[Model]
108-841 3s2kB 17%
[Model]
146-497 3s2kB 20%
[Model]
150-680 3s2kA 14%
[Model]
20-325 3s2kA 32%
[Model]
19-325 3s2kB 32%
[Model]
19-630 3s2kA 40%
[Model]
18-630 3s2kB 40%
[Model]
21-541 3s2kB 20%
[Model]
20-495 3s2kA 18%
[Model]
21-496 3s2kB 17%
[Model]
22-452 3s2kA 17%
[Model]
327-932 3s2kA 39%
[Model]
326-932 3s2kB 39%
[Model]
362-523 3s2kA 29%
[Model]
630-1246 3s2kA 97%
[Model]
62-274 3s2kB 25%
[Model]
667-821 3s2kA 29%
[Model]
674-1195 3s2kA 18%
[Model]
686-1193 3s2kB 19%
[Model]
686-767 3s2kB 34%
[Model]
727-1193 3s2kA 16%
[Model]
727-1193 3s2kB 16%
[Model]
760-1192 3s2kB 16%
[Model]
932-1245 3s2kA 32%
[Model]
931-1249 3s2kB 32%
[Model]
630-1246 3s2kB 97%
[Model]
62-797 3s2kA 17%
[Model]
371-1155 3s2kB 16%
[Model]
371-1154 3s2kA 16%
[Model]

4a0p: CRYSTAL STRUCTURE OF LRP6P3E3P4E4
Solved by: X-RAY, Resolution: 1.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

109-841 4a0pA 17%
[Model]
149-497 4a0pA 19%
[Model]
19-325 4a0pA 31%
[Model]
19-629 4a0pA 40%
[Model]
20-542 4a0pA 20%
[Model]
21-496 4a0pA 17%
[Model]
327-931 4a0pA 39%
[Model]
365-519 4a0pA 27%
[Model]
371-1154 4a0pA 16%
[Model]
630-1244 4a0pA 97%
[Model]
62-274 4a0pA 25%
[Model]
674-1194 4a0pA 18%
[Model]
727-1193 4a0pA 16%
[Model]
760-1193 4a0pA 16%
[Model]
932-1248 4a0pA 32%
[Model]

3v64: CRYSTAL STRUCTURE OF AGRIN AND LRP4
Solved by: X-RAY, Resolution: 2.85A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

151-251 3v64D 24%
[Model]
162-248 3v64C 27%
[Model]
2-325 3v64D 50%
[Model]
2-325 3v64C 50%
[Model]
193-543 3v64D 19%
[Model]
20-256 3v64D 24%
[Model]
20-235 3v64C 25%
[Model]
293-629 3v64D 39%
[Model]
293-632 3v64C 39%
[Model]
363-543 3v64C 28%
[Model]
371-559 3v64C 31%
[Model]
371-559 3v64D 31%
[Model]
427-540 3v64C 31%
[Model]
445-550 3v64D 35%
[Model]
62-260 3v64C 26%
[Model]
62-261 3v64D 26%
[Model]
598-931 3v64C 42%
[Model]
598-932 3v64D 42%
[Model]
685-797 3v64D 26%
[Model]
761-1109 3v64C 19%
[Model]
900-1245 3v64D 28%
[Model]
900-1244 3v64C 27%
[Model]
967-1155 3v64C 23%
[Model]
967-1155 3v64D 23%
[Model]
967-1109 3v64D 24%
[Model]
969-1063 3v64C 19%
[Model]
109-455 3v64D 21%
[Model]
109-453 3v64C 21%
[Model]
976-1194 3v64D 23%
[Model]
976-1194 3v64C 23%
[Model]

3s8v: CRYSTAL STRUCTURE OF LRP6-DKK1 COMPLEX
Solved by: X-RAY, Resolution: 3.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

149-495 3s8vA 20%
[Model]
19-323 3s8vA 31%
[Model]
19-627 3s8vA 40%
[Model]
20-527 3s8vA 20%
[Model]
21-483 3s8vA 18%
[Model]
326-929 3s8vA 39%
[Model]
362-540 3s8vA 24%
[Model]
371-1143 3s8vA 16%
[Model]
629-1243 3s8vA 96%
[Model]
62-273 3s8vA 25%
[Model]
673-1265 3s8vA 17%
[Model]
727-1193 3s8vA 16%
[Model]
773-860 3s8vA 25%
[Model]
932-1250 3s8vA 32%
[Model]
109-841 3s8vB 18%
[Model]
151-496 3s8vB 20%
[Model]
20-323 3s8vB 31%
[Model]
20-627 3s8vB 40%
[Model]
20-542 3s8vB 21%
[Model]
22-495 3s8vB 18%
[Model]
328-929 3s8vB 39%
[Model]
364-519 3s8vB 27%
[Model]
371-1154 3s8vB 16%
[Model]
631-1243 3s8vB 97%
[Model]
62-274 3s8vB 25%
[Model]
674-1266 3s8vB 17%
[Model]
726-1193 3s8vB 16%
[Model]
773-860 3s8vB 25%
[Model]
933-1249 3s8vB 32%
[Model]
109-825 3s8vA 18%
[Model]

3v65: CRYSTAL STRUCTURE OF AGRIN AND LRP4 COMPLEX
Solved by: X-RAY, Resolution: 3.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1016-1130 3v65B 25%
[Model]
149-476 3v65B 21%
[Model]
144-497 3v65D 21%
[Model]
2-325 3v65D 51%
[Model]
2-325 3v65B 51%
[Model]
286-559 3v65D 28%
[Model]
22-234 3v65D 25%
[Model]
282-628 3v65D 39%
[Model]
293-629 3v65B 39%
[Model]
31-233 3v65B 26%
[Model]
364-542 3v65B 28%
[Model]
362-542 3v65D 27%
[Model]
371-559 3v65B 31%
[Model]
445-540 3v65B 34%
[Model]
62-261 3v65B 26%
[Model]
62-261 3v65D 26%
[Model]
592-1067 3v65D 16%
[Model]
586-931 3v65D 42%
[Model]
598-931 3v65B 42%
[Model]
669-798 3v65D 27%
[Model]
685-824 3v65B 25%
[Model]
760-1109 3v65B 19%
[Model]
881-1245 3v65D 28%
[Model]
893-1194 3v65D 22%
[Model]
900-1245 3v65B 27%
[Model]
968-1154 3v65D 23%
[Model]
969-1108 3v65D 24%
[Model]
109-453 3v65B 21%
[Model]
108-453 3v65D 21%
[Model]
976-1194 3v65B 23%
[Model]

3kya: CRYSTAL STRUCTURE OF PUTATIVE PHOSPHATASE (NP_812416.1) FRBACTEROIDES THETAIOTAOMICRON VPI-5482 AT 1.77 A RESOLUTIO
Solved by: X-RAY, Resolution: 1.77A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

137-252 3kyaA 11%
[Model]
18-214 3kyaA 14%
[Model]
790-821 3kyaA 25%
[Model]

3p5b: THE STRUCTURE OF THE LDLR/PCSK9 COMPLEX REVEALS THE RECEPTEXTENDED CONFORMATION
Solved by: X-RAY, Resolution: 3.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

145-496 3p5bL 17%
[Model]
2-326 3p5bL 34%
[Model]
284-560 3p5bL 23%
[Model]
282-630 3p5bL 32%
[Model]
50-176 3p5bL 23%
[Model]
62-262 3p5bL 20%
[Model]
590-1111 3p5bL 14%
[Model]
586-932 3p5bL 33%
[Model]
667-799 3p5bL 24%
[Model]
706-809 3p5bL 23%
[Model]
880-1246 3p5bL 25%
[Model]
891-1194 3p5bL 22%
[Model]
969-1155 3p5bL 20%
[Model]
108-453 3p5bL 17%
[Model]
405-420 3p5bL 50%
[Model]

1npe: CRYSTAL STRUCTURE OF NIDOGEN/LAMININ COMPLEX
Solved by: X-RAY, Resolution: 2.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

109-243 1npeA 29%
[Model]
151-497 1npeA 16%
[Model]
196-543 1npeA 16%
[Model]
21-277 1npeA 32%
[Model]
20-235 1npeA 19%
[Model]
329-584 1npeA 31%
[Model]
373-559 1npeA 28%
[Model]
64-264 1npeA 28%
[Model]
632-885 1npeA 33%
[Model]
686-800 1npeA 24%
[Model]
934-1196 1npeA 24%
[Model]
966-1156 1npeA 16%
[Model]
966-1111 1npeA 18%
[Model]
968-1064 1npeA 15%
[Model]
978-1194 1npeA 23%
[Model]

3sov: THE STRUCTURE OF A BETA PROPELLER DOMAIN IN COMPLEX WITH P
Solved by: X-RAY, Resolution: 1.27A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1016-1193 3sovA 26%
[Model]
151-496 3sovA 18%
[Model]
20-325 3sovA 97%
[Model]
196-543 3sovA 18%
[Model]
20-235 3sovA 22%
[Model]
329-629 3sovA 44%
[Model]
374-559 3sovA 26%
[Model]
425-798 3sovA 19%
[Model]
64-261 3sovA 23%
[Model]
631-931 3sovA 44%
[Model]
933-1245 3sovA 31%
[Model]
965-1155 3sovA 24%
[Model]
967-1109 3sovA 23%
[Model]
967-1066 3sovA 23%
[Model]
109-455 3sovA 18%
[Model]

3soq: THE STRUCTURE OF THE FIRST YWTD BETA PROPELLER DOMAIN OF LCOMPLEX WITH A DKK1 PEPTIDE
Solved by: X-RAY, Resolution: 1.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

151-496 3soqA 17%
[Model]
20-324 3soqA 97%
[Model]
196-543 3soqA 17%
[Model]
20-235 3soqA 22%
[Model]
329-628 3soqA 44%
[Model]
373-559 3soqA 26%
[Model]
425-798 3soqA 19%
[Model]
64-261 3soqA 23%
[Model]
631-930 3soqA 45%
[Model]
933-1244 3soqA 32%
[Model]
967-1154 3soqA 24%
[Model]
967-1109 3soqA 23%
[Model]
967-1066 3soqA 23%
[Model]
109-455 3soqA 18%
[Model]
979-1194 3soqA 23%
[Model]

3sob: THE STRUCTURE OF THE FIRST YWTD BETA PROPELLER DOMAIN OF LCOMPLEX WITH A FAB
Solved by: X-RAY, Resolution: 1.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

151-496 3sobB 17%
[Model]
20-324 3sobB 97%
[Model]
196-543 3sobB 17%
[Model]
20-235 3sobB 22%
[Model]
329-628 3sobB 44%
[Model]
373-559 3sobB 26%
[Model]
425-798 3sobB 19%
[Model]
64-261 3sobB 23%
[Model]
631-930 3sobB 45%
[Model]
933-1244 3sobB 32%
[Model]
967-1154 3sobB 24%
[Model]
967-1109 3sobB 23%
[Model]
967-1066 3sobB 23%
[Model]
109-455 3sobB 18%
[Model]
979-1194 3sobB 23%
[Model]

1n7d: EXTRACELLULAR DOMAIN OF THE LDL RECEPTOR
Solved by: X-RAY, Resolution: 3.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1027-1193 1n7dA 19%
[Model]
1069-1193 1n7dA 22%
[Model]
1248-1359 1n7dA 39%
[Model]
2-325 1n7dA 35%
[Model]
282-801 1n7dA 16%
[Model]
282-629 1n7dA 32%
[Model]
371-561 1n7dA 22%
[Model]
586-1111 1n7dA 14%
[Model]
584-931 1n7dA 33%
[Model]
633-843 1n7dA 22%
[Model]
674-1067 1n7dA 13%
[Model]
77-261 1n7dA 24%
[Model]
880-1245 1n7dA 25%
[Model]
887-1195 1n7dA 23%
[Model]
967-1156 1n7dA 20%
[Model]

1rwl: EXTRACELLULAR DOMAIN OF MYCOBACTERIUM TUBERCULOSIS PKND
Solved by: X-RAY, Resolution: 1.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1015-1174 1rwlA 16%
[Model]
139-249 1rwlA 19%
[Model]
22-253 1rwlA 19%
[Model]
360-478 1rwlA 21%
[Model]
371-523 1rwlA 23%
[Model]
402-560 1rwlA 22%
[Model]
93-250 1rwlA 23%
[Model]
95-437 1rwlA 16%
[Model]
976-1134 1rwlA 19%
[Model]

1ijq: CRYSTAL STRUCTURE OF THE LDL RECEPTOR YWTD-EGF DOMAIN PAIR
Solved by: X-RAY, Resolution: 1.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

151-475 1ijqA 16%
[Model]
21-325 1ijqA 36%
[Model]
20-235 1ijqA 20%
[Model]
329-628 1ijqA 33%
[Model]
362-542 1ijqA 25%
[Model]
373-560 1ijqA 24%
[Model]
425-798 1ijqA 15%
[Model]
64-262 1ijqA 20%
[Model]
632-930 1ijqA 34%
[Model]
934-1244 1ijqA 25%
[Model]
967-1154 1ijqA 20%
[Model]
967-1109 1ijqA 22%
[Model]
967-1064 1ijqA 22%
[Model]
109-453 1ijqA 18%
[Model]
978-1194 1ijqA 23%
[Model]
1016-1174 1ijqB 26%
[Model]
151-249 1ijqB 14%
[Model]
21-325 1ijqB 36%
[Model]
329-628 1ijqB 32%
[Model]
360-543 1ijqB 24%
[Model]
374-559 1ijqB 22%
[Model]
426-798 1ijqB 14%
[Model]
44-235 1ijqB 23%
[Model]
64-263 1ijqB 19%
[Model]
632-930 1ijqB 34%
[Model]
934-1244 1ijqB 26%
[Model]
966-1155 1ijqB 21%
[Model]
966-1109 1ijqB 22%
[Model]
967-1063 1ijqB 21%
[Model]
116-453 1ijqB 16%
[Model]

1rwi: EXTRACELLULAR DOMAIN OF MYCOBACTERIUM TUBERCULOSIS PKND
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1015-1174 1rwiB 15%
[Model]
1015-1172 1rwiB 21%
[Model]
130-479 1rwiB 14%
[Model]
362-561 1rwiB 20%
[Model]
374-522 1rwiB 23%
[Model]
48-254 1rwiB 21%
[Model]
52-253 1rwiB 19%
[Model]
95-436 1rwiB 15%
[Model]
979-1134 1rwiB 19%
[Model]
1015-1173 1rwiA 22%
[Model]
139-479 1rwiA 13%
[Model]
18-254 1rwiA 20%
[Model]
359-561 1rwiA 20%
[Model]
365-523 1rwiA 23%
[Model]
92-251 1rwiA 23%
[Model]
963-1176 1rwiA 14%
[Model]
95-437 1rwiA 15%
[Model]
970-1134 1rwiA 19%
[Model]

2iau: CRYSTAL STRUCTURE OF SQUID GANGLION DFPASE W244Y MUTANT
Solved by: X-RAY, Resolution: 2.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

161-244 2iauA 20%
[Model]

2dso: CRYSTAL STRUCTURE OF D138N MUTANT OF DRP35, A 35KDA DRUG RESPONSIVE PROTEIN FROM STAPHYLOCOCCUS AUREUS
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

55-256 2dsoA 17%
[Model]
55-257 2dsoB 17%
[Model]
55-256 2dsoC 18%
[Model]
54-256 2dsoD 17%
[Model]
55-256 2dsoE 17%
[Model]
54-256 2dsoF 17%
[Model]
96-252 2dsoF 18%
[Model]

4dg6: CRYSTAL STRUCTURE OF DOMAINS 1 AND 2 OF LRP6
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

151-476 4dg6A 18%
[Model]
13-332 4dg6A 44%
[Model]
195-544 4dg6A 17%
[Model]
20-544 4dg6A 22%
[Model]
22-484 4dg6A 21%
[Model]
631-1250 4dg6A 39%
[Model]
64-274 4dg6A 23%
[Model]
719-1245 4dg6A 17%
[Model]
761-1243 4dg6A 16%
[Model]
934-1250 4dg6A 31%
[Model]
20-635 4dg6A 98%
[Model]
328-937 4dg6A 45%
[Model]
109-843 4dg6A 19%
[Model]
373-1155 4dg6A 16%
[Model]
676-1302 4dg6A 19%
[Model]

2dg0: CRYSTAL STRUCTURE OF DRP35, A 35KDA DRUG RESPONSIVE PROTEIFROM STAPHYLOCOCCUS AUREUS
Solved by: X-RAY, Resolution: 2.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

55-256 2dg0A 17%
[Model]
96-252 2dg0A 16%
[Model]
53-257 2dg0G 17%
[Model]
52-257 2dg0H 17%
[Model]
55-256 2dg0I 18%
[Model]
96-252 2dg0I 16%
[Model]
55-256 2dg0J 18%
[Model]
96-252 2dg0J 17%
[Model]
52-257 2dg0K 17%
[Model]
52-257 2dg0L 17%