SWISS-MODEL Repository - Model Details

Model Overview
Click on the bars to get more details about individual Models or experimental structures
1
1873

Sequence
UniProt P07293
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
Ion_trans
Ion_trans
Ion_trans
Ion_trans
Ca_chan_IQ

Model 3D Structure
Model information:
Modelled residue range: 1517 to 1543
Based on template: [ 2be6 ]  
Sequence Identity [%]: 81%
Model date: 2008-08-29
Revision date: 2008-08-29

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-08-29. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    1517    EVTVGKFY ATFLIQEHFR KFMKRQEEY  -                    
2be6D     1612    evtvgkfy atfliqeyfr kfkkrkeqgl v                    
                                                                      
TARGET              hhhhhh hhhhhhhhhh hhhhhhhh                        
2be6D               hhhhhh hhhhhhhhhh hhhhhhhh

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: 267036d26a7baa185fe81479325e2ab7 on BC2-cluster at Fri Aug 29 17:59:17 2008 
NO HITS FOUND IN BLAST-SEARCH FOR SEQID-CUTOFF 60 GO TO HHSEARCH


############# TEMPLATES SELECTED #############

>267036d26a7baa185fe81479325e2ab7
**********************************************************************************
>2be6D Evalue:1.5E-11 SeqID:81.481 Method:HHSEARCH Type:MODEL
------------------------------------------------------------------*---------------
>1orqC Evalue:1.3E-08 SeqID:12.274 Method:HHSEARCH Type:MODEL
------------------------------------------------****-*****-*----------------------


TEMPLATE ID    START          STOP           METHOD         STATUS         
2be6D          1517           1543           HHSEARCH       BUILT          
1orqC          1112           1386           HHSEARCH       BUILT          

FINISHED PIPELINE ON ID: 267036d26a7baa185fe81479325e2ab7 on gopt-59.cluster.bc2.ch BC2-Cluster at
Fri Aug 29 18:12:53 2008


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.