SWISS-MODEL Repository - Model Details

Model Overview
Click on the bars to get more details about individual Models or experimental structures
1
81

Sequence
UniProt P09190
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

STRING
P09190: 1148.ssr3451

Domain
Link to: [ InterPro ]
Cytochrom_B559
Cytochrom_B559a

Model 3D Structure
Model information:
Modelled residue range: 3 to 79
Based on template: [ 2axt ]  
Sequence Identity [%]: 68%
Model date: 2008-08-31
Revision date: 2008-08-31

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-08-31. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment

TARGET    3       GTTGERPF SDIVTSIRYW VIHSITIPML FIAGWLFVST GLAYDAFGTP
2axte     5003    gttgerpf sdiitsvryw vihsitipal fiagwlfvst glaydvfgtp
                                                                      
TARGET                     hhhh   hhh hh   hhhhh hhhhhhhhh    hhhh    
2axte                    h hhhh   hhh hh   hhhhh hhhhhhhhh    hhhh    


TARGET    51    RPDEYFTQTR QELPILQERY DINQEIQEF  ----                 
2axte     5051  rpdsyyaqeq rsiplvtdrf eakqqvetfl eqlk                 
                                                                      
TARGET                                 hhhhhhhh                       
2axte                                  hhhhhhhhh hh                   



Quality


no data available!


no data available!


Template Selection
START PIPELINE ON ID: 6494cd3dd7ec828381a175d92dea1e02 on BC2-cluster at Sun Aug 31 01:16:32 2008 
BLAST_TEMPLATE SELECTION SUCCESSFUL TEMPLATES FOUND:  1 GO TO MODELING STEP


############# TEMPLATES SELECTED #############

>6494cd3dd7ec828381a175d92dea1e02
*********************************************************************************
>2axte Evalue:1.38285e-27 SeqID:68.831 Method:BLAST Type:MODEL
--*****************************************************************************--


TEMPLATE ID    START          STOP           METHOD         STATUS         
2axte          3              79             BLAST          BUILT          

FINISHED PIPELINE ON ID: 6494cd3dd7ec828381a175d92dea1e02 on gopt-29.cluster.bc2.ch BC2-Cluster at
Sun Aug 31 01:16:36 2008 


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.




SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.