SWISS-MODEL Repository - Model Details

Model Overview
Click on the bars to get more details about individual Models or experimental structures
1
180

Sequence
UniProt P0C384
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
Fer4
Fer4

Model 3D Structure
Model information:
Modelled residue range: 42 to 140
Based on template: [ 2fug ]  
Sequence Identity [%]: 27%
Model date: 2008-08-31
Revision date: 2008-08-31

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-08-31. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    42      YPYEKSIT SERFRGRIHF EF-----DKC IACEVCVRVC PIDLPLVDWR
2fug9     26      ypdapval kprfhgrhvl trhpnglekc igcslcaaac payaiyvepa
                                                                      
TARGET                           ssss s              hhhhh     sssssss
2fug9                  sss       ssss sss   sss      hhhhh     sssssss


TARGET    85    FE-----KDI KRKQLLNYSI DFGVCIFCGN CVEYCPTNCL SMTEEYELST
2fug9     74    endpenpvsa geryakvyei nmlrcifcgl ceeacptgai vlgydfemad
                                                                      
TARGET          ss          sssssssss ss         hhhh    ss sss       
2fug9           ss          sssssssss ss       h hhhh    ss sss       


TARGET    130   YDRHELNYNQ I -------- ---------- ---------- ----------
2fug9     124   yeysdlvygk edmlvdvvgt kpqrreakrt gkpvkvgyvv pyvrpelegf
                                                                      
TARGET               sssss                                            
2fug9                sssss            hhhhh   h        sss            


TARGET          ------                                                
2fug9     174   kapteg                                                
                                                                      
TARGET                                                                
2fug9

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: b9551a5937a40ce00ffa142ac28f22ea on BC2-cluster at Sun Aug 31 02:20:06 2008 
NO HITS FOUND IN BLAST-SEARCH FOR SEQID-CUTOFF 60 GO TO HHSEARCH


############# TEMPLATES SELECTED #############

>b9551a5937a40ce00ffa142ac28f22ea
******************************************************************************************
>2fug9 Evalue:1.5E-29 SeqID:27.523 Method:HHSEARCH Type:MODEL
--------------------**************************************************--------------------


TEMPLATE ID    START          STOP           METHOD         STATUS         
2fug9          42             140            HHSEARCH       BUILT          

FINISHED PIPELINE ON ID: b9551a5937a40ce00ffa142ac28f22ea on gopt-77.cluster.bc2.ch BC2-Cluster at
Sun Aug 31 02:21:32 2008


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.