SWISS-MODEL Repository - Model Details

Model Overview
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1
1021

Sequence
UniProt P16425
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
RVT_1

Model 3D Structure
Model information:
Modelled residue range: 4 to 224
Based on template: [ 2ei9 ]  
Sequence Identity [%]: 23%
Model date: 2008-09-03
Revision date: 2008-09-03

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-09-03. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    4         FSFIQA NCGRGRAATI ELGVRLRRSE SMFALVQEPY LGGDEMDVLP
2ei9A     9     pr--lrigqi nlggaedatr elpsiardlg ldivlvqeqy s--------m
                                                                      
TARGET              ssssss ss   hhhhh hhhhhhhhh   sssssss   sss  sss  
2ei9A               ssssss ss   hhhhh hhhhhhhhh   sssssss             


TARGET    50    EGMRVFTDRR GKAAILVDHQ EAICMPVETL TTDYGVCLVV KGSFGSIFLC
2ei9A     49    vgflaqcgah pkagvyirnr vlpcavlhhl ssthitvvhi gg--wdlymv
                                                                      
TARGET                      sssssss     sssss       sssssss ss  ssssss
2ei9A                       sssssss     sssss       sssssss s     ssss


TARGET    100   AAYCQFDAPL EPYLRYMDAV LLQASRTPAI LGLDANAVSP MWLSKLSRHA
2ei9A     97    sayfqysdpi dpylhrlgni ldrlrgarvv icadtnahsp lwhslprhyv
                                                                      
TARGET          ssss       hhhhhhhhhh hhh    sss sssss            hh  
2ei9A           ssss       hhhhhhhhhh hhh    sss sssss                


TARGET    150   -EGQANYRRG ELLSEWMLEA RVAALNQSTE VYTFDNHRAT SDIDVTIVNE
2ei9A     147   grgqevadrr akmedfigar rlvvhnadgh lptfstange syvdvtlstr
                                                                      
TARGET             hhhhhhh hhhhhhhhhh   sss        ssss  ss s sssssss 
2ei9A              hhhhhhh hhhhhhhhhh   sss        ssss  ss s sssssss 


TARGET    199   AASMWATYEW RVDEWELSDH NIITVV --                       
2ei9A     197   g---vrvsew rvtnesssdh rlivfgvgg                       
                                                                      
TARGET                     sss     ss ssssss                          
2ei9A                      sss     ss sssssss

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: 8fac82e2e8b0cf5d977043237d40b9bd on BC2-cluster at Wed Sep  3 19:30:09 2008 
NO HITS FOUND IN BLAST-SEARCH FOR SEQID-CUTOFF 60 GO TO HHSEARCH


############# TEMPLATES SELECTED #############

>8fac82e2e8b0cf5d977043237d40b9bd
*******************************************************************************
>2ei9A Evalue:6.3E-26 SeqID:23.874 Method:HHSEARCH Type:MODEL
***-*************--------------------------------------------------------------


TEMPLATE ID    START          STOP           METHOD         STATUS         
2ei9A          4              224            HHSEARCH       BUILT          

FINISHED PIPELINE ON ID: 8fac82e2e8b0cf5d977043237d40b9bd on gopt-26.cluster.bc2.ch BC2-Cluster at
Wed Sep  3 19:41:15 2008


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.