SWISS-MODEL Repository - Model Details

Model Overview
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1
119

Sequence
UniProt P19733
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]

Model 3D Structure
Model information:
Modelled residue range: 2 to 118
Based on template: [ 2inn ]  
Sequence Identity [%]: 53%
Model date: 2008-08-30
Revision date: 2008-08-30

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-08-30. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    2       TVNSIGEY TATPRDVQAN FNGMQLLYLY WEEHLMYCSA LAFLVAPGMP
2innE     2       svnalydy kfepkdkven fhgxqllyvy wpdhllfcap fallvqpgxt
                                                                      
TARGET                                    ssssss            sssss   ss
2innE                                     ssssss            sssss   ss


TARGET    50    FAEFLEQVLK PAIHAHPDSA KIDFSQALWQ LNDQPFTPDY AASLEANGID
2innE     50    fsalvdeilk pataahpdsa kadflnaewl lndepftpka daslkeqgid
                                                                      
TARGET          shhhhhhhhh hhhh   hh         sss ss sss      sss      
2innE           shhhhhhhhh h      hh         sss ss sss      sss      


TARGET    100   HKSMLRLNTP GLNGIQGSC                                  
2innE     100   hksxltvttp glkgxanagy                                 
                                                                      
TARGET            ssssss                                              
2innE             ssssss

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: 482c41e68f378c3d796bb523c9c238ed on BC2-cluster at Sat Aug 30 05:18:46 2008 
NO HITS FOUND IN BLAST-SEARCH FOR SEQID-CUTOFF 60 GO TO HHSEARCH


############# TEMPLATES SELECTED #############

>482c41e68f378c3d796bb523c9c238ed
****************************************************************************************************
*******************
>2innE Evalue:0 SeqID:53.846 Method:HHSEARCH Type:MODEL
-***************************************************************************************************
******************-


TEMPLATE ID    START          STOP           METHOD         STATUS         
2innE          2              118            HHSEARCH       BUILT          

FINISHED PIPELINE ON ID: 482c41e68f378c3d796bb523c9c238ed on gopt-63.cluster.bc2.ch BC2-Cluster at
Sat Aug 30 05:19:49 2008


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.