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Model Overview
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1
784

Sequence
UniProt P34603
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
DNA_pol_A_exo1

Model 3D Structure
Model information:
Modelled residue range: 420 to 617
Based on template: [ 2fbt ]  
Sequence Identity [%]: 22%
Model date: 2012-10-31
Revision date: 2012-10-15

Quaternary structure information: [details]
Template (2fbt): MONOMER
Model: MONOMER

Ligand information: [details]
Ligands in the template: ACY: 1.
Ligands in the model: none.
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2012-10-15. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    1                       YPI RIVQNEQDLE ILLSELG-EL EEGMYIGYDS
2fbt_1#4  36    hhsvfeddlp fleft--gsi vysydasdcs flsedismsl sdgdvvgfdm
                                                                      
TARGET                             ss sss  hhhhh hhhhhh        sssssss
2fbt_1#4                           ss sss  hhhhh hhhhhhhhh     sssssss


TARGET    33    EFKPYHLIDV STSRLAIIQL FFK-DKAWLI NCVAIDNLAS RDDVWIRLYK
2fbt_1#4  84    ewpply-nrg klgkvaliql cvseskcylf hvssms---- ---vfpqglk
                                                                      
TARGET          s               sssss ss   sssss ss               hhhh
2fbt_1#4        s               sssss ss  ssssss ss               hhhh


TARGET    82    GLFESNKFSI VGFDIRQDIE AMFTVPSINK NFKIENIQNV ICVKSLAENV
2fbt_1#4  126   mllenkavkk agvgiegdqw kllrdfdi-- -----klknf veltdvankk
                                                                      
TARGET          hhhh    ss ss  hhhhhh hhhhhh                ssshhhhhhh
2fbt_1#4        hhhh    ss ss  hhhhhh hhhhh                 ssshhhhhhh


TARGET    132   NALSMDILNL STKTSKLSVL ADHLVGLKMD KS--EQCGNW QCRPLRRNQI
2fbt_1#4  169   lk-------- ctetwslnsl vkhllgkqll kdksircsnw skfpltedqk
                                                                      
TARGET          h                hhhh hhhh                        hhhh
2fbt_1#4        h                hhhh hhhh         hhhh           hhhh


TARGET    180   IYAVMDAVAV FEVFQKIVE  -                               
2fbt_1#4  211   lyaatdayag fiiyrnleil d                               
                                                                      
TARGET          hhhhhhhhhh hhhhhhhh                                   
2fbt_1#4        hhhhhhhhhh hhhhhhhh

Quality 


Template's ligands section 
Ligands in the template: ACY: 1. 
The template contains ligands that are not yet part of the pipeline. Ligands which are currently assessed are listed in the help page. 
No ligands were included in the model.

 
Quaternary Structure Annotation of the Template 
 2fbt is annotated as MONOMER 
 The oligomeric state of the structure was assigned by the authors of the corresponding PDB entry 
 The following biological unit was used to build the template structure: 2fbt.pdb1.gz 
      
 
Quaternary Structure Modelling of the Target Protein 
 Analysis of evolutionary and family specific aspects revealed conservation of the oligomeric structure 
 Hence, the oligomeric structures of the target and the template can be assumed to be similar (=MONOMER) 
 The corresponding reliability score is 0.8 (>0.5 indicates similarity) 
 Model was succesfully built as MONOMER.

Template Selection 
 - Start SMR-Pipeline for:08485fcced92df11c8838aca615cde1e on BC2-cluster at Wed Oct 31 04:12:40
2012 


 - Analyze BLAST summary ... 
 - No templates found with BLAST (seqid-cutoff: 60): go to HHSEARCH

 - Run HHSearch to detect more templates...
 - Generate new template library
 - Run template selection against modfied template library 
 - Summarize templates: 
 - Proof template(s) selection compared to previous Repository update
 - Need for modeling since selected templates are the not the same as in previous update

 - Send 2 Templates for modeling

 - @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@
 -                                            ********************
 - building model based on 2fbtA (420-617) was successful 
 -                                            *******************************
 - building model based on 1yt3A (421-721) was successful 
 - Repository Pipeline parameter

   Cut-off parameters to model the target based on a BLAST target-template alignment
    Evalue :                                     0.0001
    Minimum Template size (aa) for ranking :     25
    Minimum Sequence identity :                  60

   Cut-off parameters to model the target based on a HHSearch target-template alignment
    Evalue :                                     0.0001
    Probability :                                50
    MAC :                                        0.3

   Parameters for model selection
    Minimal number of uncovered target
     residues after BLAST to run HHSEARCH :      50
    Minimal number of uncovered target
     residues to model an additional template :  25
    
 - Finish SMR-Pipeline for:08485fcced92df11c8838aca615cde1e on BC2-cluster at Wed Oct 31 04:14:56
2012


Template Description
Match Chain SeqId

1sl0: TERNARY 3' COMPLEX OF T7 DNA POLYMERASE WITH A DNA PRIMER/TEMPLATE CONTAINING A DISORDERED CIS-SYN THYMINE DIMER ON THE TEMPLATE AND AN INCOMING NUCLEOTIDE
Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

215-227 1sl0A 8%
[Model]
692-697 1sl0C 33%
[Model]

1t7p: T7 DNA POLYMERASE COMPLEXED TO DNA PRIMER/TEMPLATE,A NUCLEOSIDE TRIPHOSPHATE, AND ITS PROCESSIVITY FACTOR THIOREDOXIN
Solved by: X-RAY, Resolution: 2.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

683-690 1t7pA 25%
[Model]

2fc0: WRN EXONUCLEASE, MN DGMP COMPLEX
Solved by: X-RAY, Resolution: 2.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

420-617 2fc0A 23%
[Model]

2fbv: WRN EXONUCLEASE, MN COMPLEX
Solved by: X-RAY, Resolution: 2.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

419-617 2fbvA 23%
[Model]

2fbx: WRN EXONUCLEASE, MG COMPLEX
Solved by: X-RAY, Resolution: 2.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

419-617 2fbxA 23%
[Model]

2fby: WRN EXONUCLEASE, EU COMPLEX
Solved by: X-RAY, Resolution: 2.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

420-617 2fbyA 23%
[Model]

2fbt: WRN EXONUCLEASE
Solved by: X-RAY, Resolution: 2.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

420-617 2fbtA 23%
[Model]

1skr: T7 DNA POLYMERASE COMPLEXED TO DNA PRIMER/TEMPLATE AND DDA
Solved by: X-RAY, Resolution: 2.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

683-691 1skrA 22%
[Model]

1x9s: T7 DNA POLYMERASE IN COMPLEX WITH A PRIMER/TEMPLATE DNA CONTAINING A DISORDERED N-2 AMINOFLUORENE ON THE TEMPLATECRYSTALLIZED WITH DIDEOXY-CTP AS THE INCOMING NUCLEOTIDE.
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

683-691 1x9sA 22%
[Model]

1x9w: T7 DNA POLYMERASE IN COMPLEX WITH A PRIMER/TEMPLATE DNA CONTAINING A DISORDERED N-2 AMINOFLUORENE ON THE TEMPLATECRYSTALLIZED WITH DIDEOXY-ATP AS THE INCOMING NUCLEOTIDE.
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

683-691 1x9wA 22%
[Model]

2e6l: STRUCTURE OF MOUSE WRN EXONUCLEASE DOMAIN
Solved by: X-RAY, Resolution: 2.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

418-618 2e6lA 22%
[Model]

2e6m: STRUCTURE OF MOUSE WERNER EXONUCLEASE DOMAIN
Solved by: X-RAY, Resolution: 2.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

418-618 2e6mA 22%
[Model]

1sl2: TERNARY 5' COMPLEX OF T7 DNA POLYMERASE WITH A DNA PRIMER/TEMPLATE CONTAINING A CIS-SYN THYMINE DIMER ON THETEMPLATE AND AN INCOMING NUCLEOTIDE
Solved by: X-RAY, Resolution: 2.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

685-690 1sl2A 17%
[Model]

1yt3: CRYSTAL STRUCTURE OF ESCHERICHIA COLI RNASE D, AN EXORIBONUCLEASE INVOLVED IN STRUCTURED RNA PROCESSING
Solved by: X-RAY, Resolution: 1.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

421-721 1yt3A 16%
[Model]

1qsl: KLENOW FRAGMENT COMPLEXED WITH SINGLE-STRANDED SUBSTRATE AND EUROPIUM (III) ION
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

418-621 1qslA 15%
[Model]

1krp: DNA POLYMERASE I KLENOW FRAGMENT (E.C.2.7.7.7) MUTANT/DNA COMPLEX
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

418-621 1krpA 15%
[Model]

1d9f: CRYSTAL STRUCTURE OF THE COMPLEX OF DNA POLYMERASE I KLENOFRAGMENT WITH DNA TETRAMER CARRYING 2'-O-(3-AMINOPROPYL)-RNA MODIFICATION 5'-D(TT)-AP(U)-D(T)-3'
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

418-621 1d9fA 15%
[Model]

1kfs: DNA POLYMERASE I KLENOW FRAGMENT (E.C.2.7.7.7) MUTANT/DNA COMPLEX
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

418-621 1kfsA 15%
[Model]

1d9d: CRYSTALL STRUCTURE OF THE COMPLEX OF DNA POLYMERASE I KLENOW FRAGMENT WITH SHORT DNA FRAGMENT CARRYING 2'-0- AMINOPROPYL-RNA MODIFICATIONS 5'-D(TCG)-AP(AUC)-3'
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

418-621 1d9dA 15%
[Model]

2kfn: KLENOW FRAGMENT WITH BRIDGING-SULFUR SUBSTRATE AND MANGANE
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

418-621 2kfnA 15%
[Model]

3cym: CRYSTAL STRUCTURE OF PROTEIN BAD_0989 FROM BIFIDOBACTERIUMADOLESCENTIS
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

415-624 3cymA 15%
[Model]

2kzz: KLENOW FRAGMENT WITH NORMAL SUBSTRATE AND ZINC ONLY
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

418-621 2kzzA 15%
[Model]

1kln: DNA POLYMERASE I KLENOW FRAGMENT (E.C.2.7.7.7) MUTANT/DNA COMPLEX
Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

419-621 1klnA 15%
[Model]

1kfd: CRYSTAL STRUCTURES OF THE KLENOW FRAGMENT OF DNA POLYMERASI COMPLEXED WITH DEOXYNUCLEOSIDE TRIPHOSPHATE AND PYROPHOSPHATE
Solved by: X-RAY, Resolution: 3.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

418-620 1kfdA 15%
[Model]

1d8y: CRYSTAL STRUCTURE OF THE COMPLEX OF DNA POLYMERASE I KLENOFRAGMENT WITH DNA
Solved by: X-RAY, Resolution: 2.08A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

418-621 1d8yA 15%
[Model]

2kfz: KLENOW FRAGMENT WITH BRIDGING-SULFUR SUBSTRATE AND ZINC ON
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

418-621 2kfzA 15%
[Model]

1ksp: DNA POLYMERASE I KLENOW FRAGMENT (E.C.2.7.7.7) MUTANT/DNA COMPLEX
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

418-621 1kspA 15%
[Model]

2kzm: KLENOW FRAGMENT WITH NORMAL SUBSTRATE AND ZINC AND MANGANE
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

418-621 2kzmA 15%
[Model]

2hbm: STRUCTURE OF THE YEAST NUCLEAR EXOSOME COMPONENT, RRP6P, REVEALS AN INTERPLAY BETWEEN THE ACTIVE SITE AND THE HRDCDOMAIN; PROTEIN IN COMPLEX WITH MN, ZN, AND UMP
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

415-637 2hbmA 13%
[Model]

2hbj: STRUCTURE OF THE YEAST NUCLEAR EXOSOME COMPONENT, RRP6P, REVEALS AN INTERPLAY BETWEEN THE ACTIVE SITE AND THE HRDCDOMAIN
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

415-637 2hbjA 13%
[Model]

1vk0: X-RAY STRUCTURE OF GENE PRODUCT FROM ARABIDOPSIS THALIANA AT5G06450
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

420-617 1vk0E 13%
[Model]
420-617 1vk0A 13%
[Model]
420-617 1vk0D 13%
[Model]
420-617 1vk0C 13%
[Model]
420-617 1vk0F 13%
[Model]
420-617 1vk0B 13%
[Model]

2q3s: ENSEMBLE REFINEMENT OF THE PROTEIN CRYSTAL STRUCTURE OF GENE PRODUCT FROM ARABIDOPSIS THALIANA AT5G06450
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

420-617 2q3sA 13%
[Model]
420-617 2q3sD 13%
[Model]
420-617 2q3sC 13%
[Model]
420-617 2q3sF 13%
[Model]
420-617 2q3sB 13%
[Model]
420-617 2q3sE 13%
[Model]

2hbk: STRUCTURE OF THE YEAST NUCLEAR EXOSOME COMPONENT, RRP6P, REVEALS AN INTERPLAY BETWEEN THE ACTIVE SITE AND THE HRDCDOMAIN; PROTEIN IN COMPLEX WITH MN
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

415-637 2hbkA 13%
[Model]

2hbl: STRUCTURE OF THE YEAST NUCLEAR EXOSOME COMPONENT, RRP6P, REVEALS AN INTERPLAY BETWEEN THE ACTIVE SITE AND THE HRDCDOMAIN; PROTEIN IN COMPLEX WITH MN, ZN, AND AMP
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

415-637 2hblA 13%
[Model]

3sah: CRYSTAL STRUCTURE OF THE HUMAN RRP6 CATALYTIC DOMAIN WITH MUTATION IN THE CATALYTIC SITE
Solved by: X-RAY, Resolution: 2.65A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

415-703 3sahA 12%
[Model]
415-703 3sahB 12%
[Model]

3saf: CRYSTAL STRUCTURE OF THE HUMAN RRP6 CATALYTIC DOMAIN WITH MUTATION IN THE ACTIVE SITE
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

415-703 3safA 12%
[Model]
415-718 3safB 11%
[Model]

3sag: CRYSTAL STRUCTURE OF THE HUMAN RRP6 CATALYTIC DOMAIN WITH MUTATION IN THE ACTIVE SITE
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

415-703 3sagA 12%
[Model]
415-718 3sagB 11%
[Model]

1njy: THYMINE-THYMINE MISMATCH AT THE POLYMERASE ACTIVE SITE
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 1njyA 10%
[Model]

1l3s: CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT COMPLEXED TO 9 BASE PAIRS OF DUPLEX DNA.
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 1l3sA 10%
[Model]

3hpo: CRYSTAL STRUCTURE OF FRAGMENT DNA POLYMERASE I FROM BACILLSTEAROTHERMOPHILUS Y714S MUTANT BOUND TO G:T MISMATCH
Solved by: X-RAY, Resolution: 1.75A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 3hpoA 10%
[Model]

3tan: CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I LARGE FRAGMDUPLEX DNA WITH CYTOSINE-ADENINE MISMATCH AT (N-1) POSITI
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 3tanA 10%
[Model]

1nk0: ADENINE-GUANINE MISMATCH AT THE POLYMERASE ACTIVE SITE
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 1nk0A 10%
[Model]

2hhw: DDTTP:O6-METHYL-GUANINE PAIR IN THE POLYMERASE ACTIVE SITEIN THE CLOSED CONFORMATION
Solved by: X-RAY, Resolution: 1.88A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 2hhwA 10%
[Model]
444-623 2hhwD 10%
[Model]

1ua1: STRUCTURE OF AMINOFLUORENE ADDUCT PAIRED OPPOSITE CYTOSINEAT THE POLYMERASE ACTIVE SITE.
Solved by: X-RAY, Resolution: 2.15A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 1ua1A 10%
[Model]

1nk6: CYTOSINE-CYTOSINE MISMATCH AT THE POLYMERASE ACTIVE SITE
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 1nk6A 10%
[Model]

1l5u: CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT PRODUCT COMPLEX WITH 12 BASE PAIRS OF DUPLEX DNA FOLLOWINADDITION OF A DTTP, A DATP, AND A DCTP RESIDUE.
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 1l5uA 10%
[Model]

1njw: GUANINE-THYMINE MISMATCH AT THE POLYMERASE ACTIVE SITE
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 1njwA 10%
[Model]

3pv8: CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I LARGE FRAGMDNA AND DDTTP-DA IN CLOSED CONFORMATION
Solved by: X-RAY, Resolution: 1.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 3pv8A 10%
[Model]
444-623 3pv8D 10%
[Model]

2hht: C:O6-METHYL-GUANINE PAIR IN THE POLYMERASE-2 BASEPAIR POSITION
Solved by: X-RAY, Resolution: 2.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 2hhtA 10%
[Model]

1njx: THYMINE-GUANINE MISMATCH AT THE POLYMERASE ACTIVE SITE
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 1njxA 10%
[Model]

3eyz: COCRYSTAL STRUCTURE OF BACILLUS FRAGMENT DNA POLYMERASE I WITH DUPLEX DNA (OPEN FORM)
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

432-623 3eyzA 10%
[Model]

1l3v: CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT PRODUCT COMPLEX WITH 15 BASE PAIRS OF DUPLEX DNA FOLLOWINADDITION OF DTTP, DATP, DCTP, AND DGTP RESIDUES.
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 1l3vA 10%
[Model]

1nk8: A BACILLUS DNA POLYMERASE I PRODUCT COMPLEX BOUND TO A GUANINE-THYMINE MISMATCH AFTER A SINGLE ROUND OF PRIMER EXTENSION, FOLLOWING INCORPORATION OF DCTP.
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 1nk8A 10%
[Model]

1l3t: CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT PRODUCT COMPLEX WITH 10 BASE PAIRS OF DUPLEX DNA FOLLOWINADDITION OF A SINGLE DTTP RESIDUE
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 1l3tA 10%
[Model]

4dqq: TERNARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENDUPLEX, AND RCTP (PAIRED WITH DG OF TEMPLATE) IN PRESENCE
Solved by: X-RAY, Resolution: 1.59A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

445-621 4dqqA 9%
[Model]
444-621 4dqqD 10%
[Model]

1nkb: A BACILLUS DNA POLYMERASE I PRODUCT COMPLEX BOUND TO A GUANINE-THYMINE MISMATCH AFTER THREE ROUNDS OF PRIMER EXTENSION, FOLLOWING INCORPORATION OF DCTP, DGTP, AND DTT
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 1nkbA 10%
[Model]

1lv5: CRYSTAL STRUCTURE OF THE CLOSED CONFORMATION OF BACILLUS DNA POLYMERASE I FRAGMENT BOUND TO DNA AND DCTP
Solved by: X-RAY, Resolution: 1.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

445-623 1lv5A 10%
[Model]
445-623 1lv5B 10%
[Model]

2hhu: C:O6-METHYL-GUANINE IN THE POLYMERASE POSTINSERTION SITE (1 BASEPAIR POSITION)
Solved by: X-RAY, Resolution: 2.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 2hhuA 10%
[Model]

2hvh: DDCTP:O6MEG PAIR IN THE POLYMERASE ACTIVE SITE (0 POSITION
Solved by: X-RAY, Resolution: 2.49A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 2hvhA 10%
[Model]
444-623 2hvhD 10%
[Model]

1nk7: GUANINE-ADENINE MISMATCH AT THE POLYMERASE ACTIVE SITE
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 1nk7A 10%
[Model]

1nk4: GUANINE-GUANINE MISMATCH AT THE POLYMERASE ACTIVE SITE
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 1nk4A 10%
[Model]

1xc9: STRUCTURE OF A HIGH-FIDELITY POLYMERASE BOUND TO A BENZO[A]PYRENE ADDUCT THAT BLOCKS REPLICATION
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 1xc9A 10%
[Model]

1nkc: A BACILLUS DNA POLYMERASE I PRODUCT COMPLEX BOUND TO A GUANINE-THYMINE MISMATCH AFTER FIVE ROUNDS OF PRIMER EXTENSION, FOLLOWING INCORPORATION OF DCTP, DGTP, DTTP, AND DATP.
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 1nkcA 10%
[Model]

1u45: 8OXOGUANINE AT THE PRE-INSERTION SITE OF THE POLYMERASE ACTIVE SITE
Solved by: X-RAY, Resolution: 2.15A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 1u45A 10%
[Model]

1u48: EXTENSION OF A CYTOSINE-8-OXOGUANINE BASE PAIR
Solved by: X-RAY, Resolution: 2.15A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 1u48A 10%
[Model]

3ez5: COCRYSTAL STRUCTURE OF BACILLUS FRAGMENT DNA POLYMERASE I WITH DUPLEX DNA , DCTP, AND ZINC (CLOSED FORM).
Solved by: X-RAY, Resolution: 2.49A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 3ez5A 10%
[Model]
444-623 3ez5D 10%
[Model]

3tap: CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I LARGE FRAGMDUPLEX DNA WITH CYTOSINE-ADENINE MISMATCH AT (N-3) POSITI
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 3tapA 10%
[Model]

1xwl: BACILLUS STEAROTHERMOPHILUS (NEWLY IDENTIFIED STRAIN AS YEUNNAMED) DNA POLYMERASE FRAGMENT
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 1xwlA 10%
[Model]

3hp6: CRYSTAL STRUCTURE OF FRAGMENT DNA POLYMERASE I FROM BACILLSTEAROTHERMOPHILUS F710Y MUTANT BOUND TO G:T MISMATCH
Solved by: X-RAY, Resolution: 1.81A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

443-623 3hp6A 10%
[Model]
443-623 3hp6D 10%
[Model]

1njz: CYTOSINE-THYMINE MISMATCH AT THE POLYMERASE ACTIVE SITE
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 1njzA 10%
[Model]

1nk9: A BACILLUS DNA POLYMERASE I PRODUCT COMPLEX BOUND TO A GUANINE-THYMINE MISMATCH AFTER TWO ROUNDS OF PRIMER EXTENSION, FOLLOWING INCORPORATION OF DCTP AND DGTP.
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 1nk9A 10%
[Model]

1l3u: CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT PRODUCT COMPLEX WITH 11 BASE PAIRS OF DUPLEX DNA FOLLOWINADDITION OF A DTTP AND A DATP RESIDUE.
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 1l3uA 10%
[Model]

3tar: CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I LARGE FRAGMDUPLEX DNA WITH CYTOSINE-ADENINE MISMATCH AT (N-6) POSITI
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 3tarA 10%
[Model]

3thv: CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I LARGE FRAGMDNA AND DDATP-DT IN CLOSED CONFORMATION
Solved by: X-RAY, Resolution: 1.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 3thvA 10%
[Model]
444-623 3thvD 10%
[Model]

1u47: CYTOSINE-8-OXOGUANINE BASE PAIR AT THE POLYMERASE ACTIVE SITE
Solved by: X-RAY, Resolution: 2.15A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 1u47A 10%
[Model]

1nke: A BACILLUS DNA POLYMERASE I PRODUCT COMPLEX BOUND TO A CYTOSINE-THYMINE MISMATCH AFTER A SINGLE ROUND OF PRIMER EXTENSION, FOLLOWING INCORPORATION OF DCTP.
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 1nkeA 10%
[Model]

2hhq: O6-METHYL-GUANINE:T PAIR IN THE POLYMERASE-10 BASEPAIR POSITION
Solved by: X-RAY, Resolution: 2.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 2hhqA 10%
[Model]

3taq: CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I LARGE FRAGMDUPLEX DNA WITH CYTOSINE-ADENINE MISMATCH AT (N-4) POSITI
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 3taqA 10%
[Model]

1nk5: ADENINE-ADENINE MISMATCH AT THE POLYMERASE ACTIVE SITE
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 1nk5A 10%
[Model]

3ti0: CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I LARGE FRAGMDNA AND DDGTP-DC IN CLOSED CONFORMATION
Solved by: X-RAY, Resolution: 1.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 3ti0A 10%
[Model]
444-623 3ti0D 10%
[Model]

2hw3: T:O6-METHYL-GUANINE PAIR IN THE POLYMERASE POSTINSERTION SITE (-1 BASEPAIR POSITION)
Solved by: X-RAY, Resolution: 2.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 2hw3A 10%
[Model]

1u49: ADENINE-8OXOGUANINE MISMATCH AT THE POLYMERASE ACTIVE SITE
Solved by: X-RAY, Resolution: 2.15A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 1u49A 10%
[Model]

3ht3: CRYSTAL STRUCTURE OF FRAGMENT DNA POLYMERASE I FROM BACILLSTEAROTHERMOPHILUS V713P MUTANT BOUND TO G:DCTP
Solved by: X-RAY, Resolution: 1.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

432-622 3ht3A 10%
[Model]
432-622 3ht3D 10%
[Model]

3px0: CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I LARGE FRAGMDNA AND DCTP-DA MISMATCH (TAUTOMER) IN CLOSED CONFORMATIO
Solved by: X-RAY, Resolution: 1.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-622 3px0A 9%
[Model]
444-623 3px0D 10%
[Model]

4dqp: TERNARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENDUPLEX, AND DDCTP (PAIRED WITH DG OF TEMPLATE)
Solved by: X-RAY, Resolution: 1.74A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

445-621 4dqpA 9%
[Model]
445-621 4dqpD 10%
[Model]

2hhs: O6-METHYL:C PAIR IN THE POLYMERASE-10 BASEPAIR POSITION
Solved by: X-RAY, Resolution: 2.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 2hhsA 10%
[Model]

2hvi: DDCTP:G PAIR IN THE POLYMERASE ACTIVE SITE (0 POSITION)
Solved by: X-RAY, Resolution: 2.49A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 2hviA 10%
[Model]
444-623 2hviD 10%
[Model]

1u4b: EXTENSION OF AN ADENINE-8OXOGUANINE MISMATCH
Solved by: X-RAY, Resolution: 2.15A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 1u4bA 10%
[Model]

2hhv: T:O6-METHYL-GUANINE IN THE POLYMERASE-2 BASEPAIR POSITION
Solved by: X-RAY, Resolution: 2.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 2hhvA 10%
[Model]

1ua0: AMINOFLUORENE DNA ADDUCT AT THE PRE-INSERTION SITE OF A DNPOLYMERASE
Solved by: X-RAY, Resolution: 2.15A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 1ua0A 10%
[Model]

4dqi: TERNARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENDUPLEX, AND DCTP (PAIRED WITH DG OF TEMPLATE)
Solved by: X-RAY, Resolution: 1.74A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

445-621 4dqiA 10%
[Model]
445-621 4dqiD 10%
[Model]

2xo7: CRYSTAL STRUCTURE OF A DA:O-ALLYLHYDROXYLAMINE-DC BASEPAIRWITH FRAGMENT DNA POLYMERASE I FROM BACILLUS STEAROTHERMO
Solved by: X-RAY, Resolution: 2.85A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

445-622 2xo7A 9%
[Model]

2y1i: CRYSTAL STRUCTURE OF A S-DIASTEREOMER ANALOGUE OF THE SPORPHOTOPRODUCT IN COMPLEX WITH FRAGMENT DNA POLYMERASE I FROM BACILLUS STEAROTHERMOPHILUS
Solved by: X-RAY, Resolution: 2.78A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

445-622 2y1iA 9%
[Model]

2xy5: CRYSTAL STRUCTURE OF AN ARTIFICIAL SALEN-COPPER BASEPAIR ICOMPLEX WITH FRAGMENT DNA POLYMERASE I FROM BACILLUS STEAROTHERMOPHILUS
Solved by: X-RAY, Resolution: 2.22A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

443-622 2xy5A 9%
[Model]

4ds4: TERNARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENDUPLEX, AND RCTP IN PRESENCE OF MN2+
Solved by: X-RAY, Resolution: 1.68A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

445-621 4ds4A 9%
[Model]
445-622 4ds4D 9%
[Model]

3px4: CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I LARGE FRAGMDNA AND DDCTP-DA MISMATCH (WOBBLE) IN AJAR CONFORMATION
Solved by: X-RAY, Resolution: 1.58A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

445-621 3px4A 9%
[Model]
444-623 3px4D 10%
[Model]

2xy7: CRYSTAL STRUCTURE OF A SALICYLIC ALDEHYDE BASE IN THE PRE-SITE OF FRAGMENT DNA POLYMERASE I FROM BACILLUS STEAROTHE
Solved by: X-RAY, Resolution: 3.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

445-623 2xy7A 9%
[Model]

4ds5: TERNARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENDUPLEX, AND RCTP IN PRESENCE OF MG2+
Solved by: X-RAY, Resolution: 1.68A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

445-621 4ds5A 9%
[Model]
445-622 4ds5D 9%
[Model]

4dqs: BINARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENTDNA WITH RC IN PRIMER TERMINUS PAIRED WITH DG OF TEMPLATE
Solved by: X-RAY, Resolution: 1.66A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-622 4dqsA 9%
[Model]

2y1j: CRYSTAL STRUCTURE OF A R-DIASTEREOMER ANALOGUE OF THE SPORPHOTOPRODUCT IN COMPLEX WITH FRAGMENT DNA POLYMERASE I FROM BACILLUS STEAROTHERMOPHILUS
Solved by: X-RAY, Resolution: 2.78A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

445-622 2y1jA 9%
[Model]

4dqr: TERNARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENDUPLEX, AND RCTP (PAIRED WITH DG OF TEMPLATE) IN PRESENCE
Solved by: X-RAY, Resolution: 1.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

445-621 4dqrA 9%
[Model]
445-621 4dqrD 9%
[Model]

2xy6: CRYSTAL STRUCTURE OF A SALICYLIC ALDEHYDE BASEPAIR IN COMPLEX WITH FRAGMENT DNA POLYMERASE I FROM BACILLUS STEAROTHERMOPHILUS
Solved by: X-RAY, Resolution: 2.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-622 2xy6A 9%
[Model]

2bdp: CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT COMPLEXED TO 9 BASE PAIRS OF DUPLEX DNA
Solved by: X-RAY, Resolution: 1.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-622 2bdpA 9%
[Model]

3px6: CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I LARGE FRAGMDNA AND DDCTP-DA MISMATCH (TAUTOMER) IN CLOSED CONFORMATI
Solved by: X-RAY, Resolution: 1.59A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-623 3px6A 10%
[Model]
444-621 3px6D 9%
[Model]

4dse: TERNARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENDUPLEX, AND RCTP (PAIRED WITH DG OF TEMPLATE) IN PRESENCE
Solved by: X-RAY, Resolution: 1.67A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

445-621 4dseA 9%
[Model]
444-623 4dseD 10%
[Model]

3bdp: DNA POLYMERASE I/DNA COMPLEX
Solved by: X-RAY, Resolution: 1.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-622 3bdpA 9%
[Model]

4bdp: CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT COMPLEXED TO 11 BASE PAIRS OF DUPLEX DNA AFTER ADDITION OTWO DATP RESIDUES
Solved by: X-RAY, Resolution: 1.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-622 4bdpA 9%
[Model]

4dsf: TERNARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENDUPLEX, AND RCTP (PAIRED WITH DG OF TEMPLATE) IN PRESENCE
Solved by: X-RAY, Resolution: 1.67A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

445-621 4dsfA 9%
[Model]
444-623 4dsfD 10%
[Model]

4e0d: BINARY COMPLEX OF BACILLUS DNA POLYMERASE I LARGE FRAGMENTDUPLEX DNA
Solved by: X-RAY, Resolution: 1.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

445-621 4e0dA 9%
[Model]

2hhx: O6-METHYL-GUANINE IN THE POLYMERASE TEMPLATE PREINSERTION SITE
Solved by: X-RAY, Resolution: 2.26A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

444-622 2hhxA 9%
[Model]

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Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.