SWISS-MODEL Repository - Model Details

Model Overview
Click on the bars to get more details about individual Models or experimental structures

Sequence
UniProt P41593
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
7tm_2
HRM

Model 3D Structure
Model information:
Modelled residue range: 168 to 197
Based on template: [ 1bl1 ]  
Sequence Identity [%]: 86%
Model date: 2013-05-04
Revision date: 2013-04-01

Quaternary structure information: [details]
Template (1bl1): MONOMER
Model: MONOMER

Ligand information: [details]
Ligands in the template: none.
Ligands in the model: none.
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

Alignment

TARGET    1       SECLKFMT NETREREVFD RLGMIYTVGY SM                   
1bl1_1#1  1       seavkflt netrerevfd rlgmiytvgy svc                  
                                                                      
TARGET             hhhhhhh h   hhhhh       hhhhh                      
1bl1_1#1           hhhhhhh h   hhhhh       hhhhh                      



Quality


Template's ligands section
Template without ligands.
No ligands were included in the model.


Quaternary Structure Annotation of the Template
1bl1 is annotated as MONOMER
The template structure (1bl1) was solved by NMR and does not contain any quaternary structure annotation
The template is annotated by the number of chains found in the PDB file

Quaternary Structure Modelling of the Target Protein
The quaternary structure can be assumed to be identical
Model was succesfully built as MONOMER.


Template Selection
 - Start SMR-Pipeline for:d46754712f17abb517c3a4619b9dadd3 on BC2-cluster at Sat May  4 02:58:23
2013 


 - Analyze BLAST summary ... 
 - Blast template search was successfull, number of templates selected for modeling:  2
 - But still uncovered regions of the target sequence detected, go for: HHSEARCH

 - No A3m found

 - Run HHSearch to detect more templates...
FATAL - No md5 found in hash for: 3zpqB
FATAL - No md5 found in hash for: 3zprB
FATAL - No md5 found in hash for: 3zpqA
FATAL - No md5 found in hash for: 3zprA
 - Generate new template library
 - Run template selection against modified template library 
 - Summarize templates: 
 - No template with B found
 - No template with B found
 - No template with L found
 - No template with H found
 - No template with L found
 - No template with H found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with A found
 - No template with B found
 - No template with A found
 - No template with B found
 - No template with G found
 - No template with N found
 - No template with B found
 - No template with B found
 - No template with A found
 - No template with A found
 - No template with B found
 - No template with B found
 - No template with C found
 - No template with B found
 - No template with L found
 - No template with H found
 - No template with A found
 - No template with B found
 - No template with R found
 - No template with E found
 - No template with D found
 - No template with R found
 - No template with E found
 - No template with D found
 - No template with F found
 - No template with B found
 - No template with L found
 - No template with H found
 - No template with B found
 - No template with C found
 - No template with D found
 - No template with C found
 - No template with D found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with C found
 - No template with B found
 - No template with B found
 - No template with D found
 - No template with D found
 - No template with C found
 - No template with C found
 - No template with D found
 - No template with C found
 - No template with D found
 - Proof template(s) selection compared to previous Repository update
 - Different number of templates selected (old0 vs new:6): model based on new templates
 - Send 6 Templates for modeling

 - @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@
 -                        ****
 - building model based on 1bl1A (168-197) was successful 
 -    **********************
 - building model based on 3l2jB (24-187) was successful 
 -                             ****
 - building model based on 3v2wA (209-234) was successful 
 -                                                  ***************
 - building model based on 2r4rA (363-475) was successful 
 -                          ***************************************
 - building model based on 4ea3A (187-471) was successful 
 -                     ********************************************
 - building model based on 2x72A (150-475) was not successful go to next best template
 -                      *******************************************
 - building model based on 1f88A (158-475) was not successful go to next best template
 -                      *******************************************
 - building model based on 3c9mA (157-475) was successful 
 - Repository Pipeline parameter

   Cut-off parameters to model the target based on a BLAST target-template alignment
    Evalue :                                     0.0001
    Minimum Template size (aa) for ranking :     25
    Minimum Sequence identity :                  60

   Cut-off parameters to model the target based on a HHSearch target-template alignment
    Evalue :                                     0.0001
    Probability :                                50
    MAC :                                        0.3

   Parameters for model selection
    Minimal number of uncovered target
     residues after BLAST to run HHSEARCH :      50
    Minimal number of uncovered target
     residues to model an additional template :  25
    
 - Finish SMR-Pipeline for:d46754712f17abb517c3a4619b9dadd3 on BC2-cluster at Sat May  4 03:14:54
2013 




Template Description
Match Chain SeqId

1bl1: PTH RECEPTOR N-TERMINUS FRAGMENT, NMR, 1 STRUCTURE
Solved by: NMR, Identified by BLAST
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

168-197 1bl1A 87%
[Model]

3l2j: DIMERIC STRUCTURE OF THE LIGAND-FREE EXTRACELLULAR DOMAIN THE HUMAN PARATHYROID HORMONE RECEPTOR (PTH1R)
Solved by: X-RAY, Resolution: 3.24A, Identified by BLAST
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

24-187 3l2jA 63%
[Model]
24-187 3l2jB 63%
[Model]

3c4m: STRUCTURE OF HUMAN PARATHYROID HORMONE IN COMPLEX WITH THEEXTRACELLULAR DOMAIN OF ITS G-PROTEIN-COUPLED RECEPTOR (PTH1R)
Solved by: X-RAY, Resolution: 1.95A, Identified by BLAST
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

24-175 3c4mB 61%
[Model]

3h3g: CRYSTAL STRUCTURE OF THE EXTRACELLULAR DOMAIN OF THE HUMANPARATHYROID HORMONE RECEPTOR (PTH1R) IN COMPLEX WITH PARATHYROID HORMONE-RELATED PROTEIN (PTHRP)
Solved by: X-RAY, Resolution: 1.94A, Identified by BLAST
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

24-175 3h3gA 61%
[Model]

3n7s: CRYSTAL STRUCTURE OF THE ECTODOMAIN COMPLEX OF THE CGRP RECLASS-B GPCR, REVEALS THE SITE OF DRUG ANTAGONISM
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

104-171 3n7sA 38%
[Model]
105-172 3n7sB 38%
[Model]

2jnc: REFINED 3D NMR STRUCTURE OF ECD1 OF MCRF-R2BETA AT PH 5
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

105-172 2jncA 37%
[Model]

3n7r: CRYSTAL STRUCTURE OF THE ECTODOMAIN COMPLEX OF THE CGRP RECLASS-B GPCR, REVEALS THE SITE OF DRUG ANTAGONISM
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

105-171 3n7rA 37%
[Model]
104-171 3n7rB 38%
[Model]

3aqf: CRYSTAL STRUCTURE OF THE HUMAN CRLR/RAMP2 EXTRACELLULAR CO
Solved by: X-RAY, Resolution: 2.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

104-173 3aqfB 37%
[Model]

2jnd: 3D NMR STRUCTURE OF ECD1 OF MCRF-R2B IN COMPLEX WITH ASTRESSIN
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

105-173 2jndA 36%
[Model]

2l27: NMR STRUCTURE OF THE ECD1 OF CRF-R1 IN COMPLEX WITH A PEPT
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

99-175 2l27A 34%
[Model]

1u34: 3D NMR STRUCTURE OF THE FIRST EXTRACELLULAR DOMAIN OF CRFR2BETA, A TYPE B1 G-PROTEIN COUPLED RECEPTOR
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

105-180 1u34A 34%
[Model]

3n7p: CRYSTAL STRUCTURE OF THE ECTODOMAIN COMPLEX OF THE CGRP RECLASS-B GPCR, REVEALS THE SITE OF DRUG ANTAGONISM
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

104-171 3n7pA 38%
[Model]
104-171 3n7pB 38%
[Model]
107-167 3n7pC 34%
[Model]
104-171 3n7pJ 38%
[Model]

2xdg: CRYSTAL STRUCTURE OF THE EXTRACELLULAR DOMAIN OF HUMAN GROWTH HORMONE RELEASING HORMONE RECEPTOR.
Solved by: X-RAY, Resolution: 1.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

105-172 2xdgA 30%
[Model]
105-172 2xdgB 30%
[Model]

2jod: PAC1-RSHORT N-TERMINAL EC DOMAIN PACAP(6-38) COMPLEX
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

103-172 2jodA 30%
[Model]

2x57: CRYSTAL STRUCTURE OF THE EXTRACELLULAR DOMAIN OF HUMAN VASOACTIVE INTESTINAL POLYPEPTIDE RECEPTOR 2
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

106-171 2x57A 29%
[Model]
106-171 2x57B 29%
[Model]
106-171 2x57C 29%
[Model]

4dlq: CRYSTAL STRUCTURE OF THE GAIN AND HORMR DOMAINS OF CIRL 1/1 (CL1)
Solved by: X-RAY, Resolution: 1.85A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

104-172 4dlqA 24%
[Model]

4ers: A MOLECULAR BASIS FOR NEGATIVE REGULATION OF THE GLUCAGON
Solved by: X-RAY, Resolution: 2.64A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

104-171 4ersA 23%
[Model]

3iol: CRYSTAL STRUCTURE OF GLUCAGON-LIKE PEPTIDE-1 IN COMPLEX WITHE EXTRACELLULAR DOMAIN OF THE GLUCAGON-LIKE PEPTIDE-1 RECEPTOR
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

31-172 3iolA 20%
[Model]

3c59: CRYSTAL STRUCTURE OF THE LIGAND-BOUND GLUCAGON-LIKE PEPTID1 RECEPTOR EXTRACELLULAR DOMAIN
Solved by: X-RAY, Resolution: 2.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

31-173 3c59A 20%
[Model]

3c5t: CRYSTAL STRUCTURE OF THE LIGAND-BOUND GLUCAGON-LIKE PEPTID1 RECEPTOR EXTRACELLULAR DOMAIN
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

31-173 3c5tA 20%
[Model]

3rze: STRUCTURE OF THE HUMAN HISTAMINE H1 RECEPTOR IN COMPLEX WI
Solved by: X-RAY, Resolution: 3.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

209-235 3rzeA 19%
[Model]

3v2w: CRYSTAL STRUCTURE OF A LIPID G PROTEIN-COUPLED RECEPTOR AT
Solved by: X-RAY, Resolution: 3.35A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

209-234 3v2wA 19%
[Model]

4dlo: CRYSTAL STRUCTURE OF THE GAIN AND HORMR DOMAINS OF BRAIN AINHIBITOR 3 (BAI3)
Solved by: X-RAY, Resolution: 2.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

104-172 4dloA 18%
[Model]
100-172 4dloB 17%
[Model]

2r4s: CRYSTAL STRUCTURE OF THE HUMAN BETA2 ADRENOCEPTOR
Solved by: X-RAY, Resolution: 3.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

363-475 2r4sA 16%
[Model]

2r4r: CRYSTAL STRUCTURE OF THE HUMAN BETA2 ADRENOCEPTOR
Solved by: X-RAY, Resolution: 3.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

363-475 2r4rA 16%
[Model]

2qkh: CRYSTAL STRUCTURE OF THE EXTRACELLULAR DOMAIN OF HUMAN GIPRECEPTOR IN COMPLEX WITH THE HORMONE GIP
Solved by: X-RAY, Resolution: 1.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

33-173 2qkhA 16%
[Model]

3kj6: CRYSTAL STRUCTURE OF A METHYLATED BETA2 ADRENERGIC RECEPTOFAB COMPLEX
Solved by: X-RAY, Resolution: 3.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

361-475 3kj6A 13%
[Model]

2ksb: SUBSTANCE P IN ISOTROPIC Q=0.25 DMPC/CHAPS/GM1 BICELLES ASFOR NK1R
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

190-476 2ksbA 12%
[Model]

4ea3: STRUCTURE OF THE N/OFQ OPIOID RECEPTOR IN COMPLEX WITH A PMIMETIC
Solved by: X-RAY, Resolution: 3.01A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

190-472 4ea3B 12%
[Model]
187-471 4ea3A 12%
[Model]

2ksa: SUBSTANCE P IN DMPC/CHAPS ISOTROPIC Q=0.25 BICELLES AS A LNK1R
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

190-476 2ksaA 12%
[Model]

2ks9: SOLUTION CONFORMATION OF SUBSTANCE P IN WATER COMPLEXED WI
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

190-476 2ks9A 12%
[Model]

2ydv: THERMOSTABILISED HUMAN A2A RECEPTOR WITH NECA BOUND
Solved by: X-RAY, Resolution: 2.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

196-481 2ydvA 11%
[Model]

2ziy: CRYSTAL STRUCTURE OF SQUID RHODOPSIN
Solved by: X-RAY, Resolution: 3.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

183-480 2ziyA 11%
[Model]

3v2y: CRYSTAL STRUCTURE OF A LIPID G PROTEIN-COUPLED RECEPTOR AT
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

196-381 3v2yA 11%
[Model]

3vg9: CRYSTAL STRUCTURE OF HUMAN ADENOSINE A2A RECEPTOR WITH AN INVERSE-AGONIST ANTIBODY AT 2.7 A RESOLUTION
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

194-478 3vg9A 11%
[Model]

1hzx: CRYSTAL STRUCTURE OF BOVINE RHODOPSIN
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

188-475 1hzxA 9%
[Model]
187-475 1hzxB 11%
[Model]

3vga: CRYSTAL STRUCTURE OF HUMAN ADENOSINE A2A RECEPTOR WITH AN INVERSE-AGONIST ANTIBODY AT 3.1 A RESOLUTION
Solved by: X-RAY, Resolution: 3.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

196-477 3vgaA 11%
[Model]

1f88: CRYSTAL STRUCTURE OF BOVINE RHODOPSIN
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

189-475 1f88B 11%
[Model]
158-475 1f88A 10%
[Model]

2ydo: THERMOSTABILISED HUMAN A2A RECEPTOR WITH ADENOSINE BOUND
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

197-479 2ydoA 11%
[Model]

1l9h: CRYSTAL STRUCTURE OF BOVINE RHODOPSIN AT 2.6 ANGSTROMS RESOLUTION
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

188-475 1l9hA 9%
[Model]
187-475 1l9hB 11%
[Model]

2lnl: STRUCTURE OF HUMAN CXCR1 IN PHOSPHOLIPID BILAYERS
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

189-477 2lnlA 11%
[Model]

3uzc: THERMOSTABILISED ADENOSINE A2A RECEPTOR IN COMPLEX WITH 4-PHENYL-1,2,4-TRIAZIN-6-YL)-2-CHLOROPHENOL
Solved by: X-RAY, Resolution: 3.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

196-475 3uzcA 10%
[Model]

4eiy: CRYSTAL STRUCTURE OF THE CHIMERIC PROTEIN OF A2AAR-BRIL INWITH ZM241385 AT 1.8A RESOLUTION
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

206-334 4eiyA 10%
[Model]

4iar: CRYSTAL STRUCTURE OF THE CHIMERIC PROTEIN OF 5-HT1B-BRIL IWITH ERGOTAMINE (PSI COMMUNITY TARGET, E. XU)
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

189-340 4iarA 10%
[Model]

2i35: CRYSTAL STRUCTURE OF RHOMBOHEDRAL CRYSTAL FORM OF GROUND- STATE RHODOPSIN
Solved by: X-RAY, Resolution: 3.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

158-475 2i35A 10%
[Model]

3pqr: CRYSTAL STRUCTURE OF METARHODOPSIN II IN COMPLEX WITH A C-PEPTIDE DERIVED FROM THE GALPHA SUBUNIT OF TRANSDUCIN
Solved by: X-RAY, Resolution: 4.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

157-475 3pqrA 10%
[Model]

3pxo: CRYSTAL STRUCTURE OF METARHODOPSIN II
Solved by: X-RAY, Resolution: 4.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

157-475 3pxoA 10%
[Model]

3aym: CRYSTAL STRUCTURE OF THE BATHO INTERMEDIATE OF SQUID RHODO
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

183-479 3aymA 10%
[Model]
186-481 3aymB 10%
[Model]

2z73: CRYSTAL STRUCTURE OF SQUID RHODOPSIN
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

183-479 2z73A 10%
[Model]
186-481 2z73B 10%
[Model]

3rey: THERMOSTABILISED ADENOSINE A2A RECEPTOR IN COMPLEX WITH XA
Solved by: X-RAY, Resolution: 3.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

196-475 3reyA 10%
[Model]

3ayn: CRYSTAL STRUCTURE OF SQUID ISORHODOPSIN
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

183-479 3aynA 10%
[Model]
186-481 3aynB 10%
[Model]

3cap: CRYSTAL STRUCTURE OF NATIVE OPSIN: THE G PROTEIN-COUPLED RECEPTOR RHODOPSIN IN ITS LIGAND-FREE STATE
Solved by: X-RAY, Resolution: 4.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

157-475 3capB 10%
[Model]
157-475 3capA 10%
[Model]

2x72: CRYSTAL STRUCTURE OF THE CONSTITUTIVELY ACTIVE E113Q,N2C, RHODOPSIN MUTANT WITH BOUND GALPHACT PEPTIDE.
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

150-475 2x72A 10%
[Model]

3pwh: THERMOSTABILISED ADENOSINE A2A RECEPTOR
Solved by: X-RAY, Resolution: 3.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

196-475 3pwhA 10%
[Model]

2j4y: CRYSTAL STRUCTURE OF A RHODOPSIN STABILIZING MUTANT EXPRESSED IN MAMMALIAN CELLS
Solved by: X-RAY, Resolution: 3.4A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

148-475 2j4yA 10%
[Model]
148-475 2j4yB 10%
[Model]

3c9l: STRUCTURE OF GROUND-STATE BOVINE RHODOSPIN IN A HEXAGONAL CRYSTAL FORM
Solved by: X-RAY, Resolution: 3.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

158-475 3c9lA 10%
[Model]

3uza: THERMOSTABILISED ADENOSINE A2A RECEPTOR IN COMPLEX WITH 6-DIMETHYLPYRIDIN-4-YL)-5-PHENYL-1,2,4-TRIAZIN-3-AMINE
Solved by: X-RAY, Resolution: 3.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

196-475 3uzaA 10%
[Model]

3dqb: CRYSTAL STRUCTURE OF THE ACTIVE G-PROTEIN-COUPLED RECEPTOROPSIN IN COMPLEX WITH A C-TERMINAL PEPTIDE DERIVED FROM THE GALPHA SUBUNIT OF TRANSDUCIN
Solved by: X-RAY, Resolution: 4.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

157-475 3dqbA 10%
[Model]

1gzm: STRUCTURE OF BOVINE RHODOPSIN IN A TRIGONAL CRYSTAL FORM
Solved by: X-RAY, Resolution: 3.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

158-475 1gzmA 10%
[Model]
158-475 1gzmB 10%
[Model]

3rfm: THERMOSTABILISED ADENOSINE A2A RECEPTOR IN COMPLEX WITH CA
Solved by: X-RAY, Resolution: 3.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

196-475 3rfmA 10%
[Model]

3c9m: STRUCTURE OF A MUTANT BOVINE RHODOPSIN IN HEXAGONAL CRYSTAFORM
Solved by: X-RAY, Resolution: 3.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

157-475 3c9mA 10%
[Model]

2i36: CRYSTAL STRUCTURE OF TRIGONAL CRYSTAL FORM OF GROUND-STATERHODOPSIN
Solved by: X-RAY, Resolution: 4.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

157-475 2i36A 10%
[Model]
197-474 2i36B 9%
[Model]
157-474 2i36C 10%
[Model]

2hpy: CRYSTALLOGRAPHIC MODEL OF LUMIRHODOPSIN
Solved by: X-RAY, Resolution: 2.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

197-475 2hpyB 9%
[Model]
197-475 2hpyA 9%
[Model]

2ped: CRYSTALLOGRAPHIC MODEL OF 9-CIS-RHODOPSIN
Solved by: X-RAY, Resolution: 2.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

197-475 2pedA 9%
[Model]
197-475 2pedB 9%
[Model]

2ycy: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND ANTAGONIST CYANOPINDOLOL
Solved by: X-RAY, Resolution: 3.15A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

188-474 2ycyA 9%
[Model]
187-474 2ycyB 8%
[Model]

1jfp: STRUCTURE OF BOVINE RHODOPSIN (DARK ADAPTED)
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

198-475 1jfpA 9%
[Model]

2g87: CRYSTALLOGRAPHIC MODEL OF BATHORHODOPSIN
Solved by: X-RAY, Resolution: 2.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

197-475 2g87A 9%
[Model]
197-475 2g87B 9%
[Model]

4a4m: CRYSTAL STRUCTURE OF THE LIGHT-ACTIVATED CONSTITUTIVELY ACN2C,M257Y,D282C RHODOPSIN MUTANT IN COMPLEX WITH A PEPTIDRESEMBLING THE C-TERMINUS OF THE GALPHA-PROTEIN SUBUNIT (
Solved by: X-RAY, Resolution: 3.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

197-475 4a4mA 9%
[Model]

1u19: CRYSTAL STRUCTURE OF BOVINE RHODOPSIN AT 2.2 ANGSTROMS RESOLUTION
Solved by: X-RAY, Resolution: 2.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

197-475 1u19B 9%
[Model]
197-475 1u19A 9%
[Model]

3oax: CRYSTAL STRUCTURE OF BOVINE RHODOPSIN WITH BETA-IONONE
Solved by: X-RAY, Resolution: 2.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

197-475 3oaxA 9%
[Model]
197-475 3oaxB 9%
[Model]

3sn6: CRYSTAL STRUCTURE OF THE BETA2 ADRENERGIC RECEPTOR-GS PROT
Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

196-474 3sn6R 9%
[Model]

2i37: CRYSTAL STRUCTURE OF A PHOTOACTIVATED RHODOPSIN
Solved by: X-RAY, Resolution: 4.15A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

197-470 2i37A 9%
[Model]
186-475 2i37B 10%
[Model]
197-475 2i37C 9%
[Model]

1ln6: STRUCTURE OF BOVINE RHODOPSIN (METARHODOPSIN II)
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

198-475 1ln6A 9%
[Model]

2y03: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND AGONIST ISOPRENALINE
Solved by: X-RAY, Resolution: 3.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

182-474 2y03A 9%
[Model]
182-474 2y03B 8%
[Model]

4amj: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND BIASED AGONIST CARVEDILOL
Solved by: X-RAY, Resolution: 2.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

183-474 4amjA 8%
[Model]
181-474 4amjB 8%
[Model]

2vt4: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND CYANOPINDOLOL
Solved by: X-RAY, Resolution: 2.7A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

188-474 2vt4A 8%
[Model]
186-474 2vt4B 9%
[Model]
187-342 2vt4C 8%
[Model]
187-473 2vt4D 10%
[Model]

4iaq: CRYSTAL STRUCTURE OF THE CHIMERIC PROTEIN OF 5-HT1B-BRIL IWITH DIHYDROERGOTAMINE (PSI COMMUNITY TARGET, E. XU)
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

190-475 4iaqA 8%
[Model]

2ycx: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND ANTAGONIST CYANOPINDOLOL
Solved by: X-RAY, Resolution: 3.25A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

186-471 2ycxA 8%
[Model]
187-474 2ycxB 8%
[Model]

2y02: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND AGONIST CARMOTEROL
Solved by: X-RAY, Resolution: 3.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

183-474 2y02A 8%
[Model]
182-474 2y02B 8%
[Model]

2y01: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND PARTIAL AGONIST DOBUTAMINE (CRYSTAL DOB102)
Solved by: X-RAY, Resolution: 3.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

183-474 2y01A 8%
[Model]
182-474 2y01B 8%
[Model]

2ycw: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND ANTAGONIST CARAZOLOL
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

181-474 2ycwA 8%
[Model]
181-474 2ycwB 8%
[Model]

4ami: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND BIASED AGONIST BUCINDOLOL
Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

182-342 4amiA 8%
[Model]
183-473 4amiB 8%
[Model]

2y00: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND PARTIAL AGONIST DOBUTAMINE (CRYSTAL DOB92)
Solved by: X-RAY, Resolution: 3.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

183-474 2y00A 8%
[Model]
182-474 2y00B 8%
[Model]

4gpo: OLIGOMEIC TURKEY BETA1-ADRENERGIC G PROTEIN-COUPLED RECEPT
Solved by: X-RAY, Resolution: 3.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

182-342 4gpoB 8%
[Model]
183-472 4gpoA 9%
[Model]

2y04: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND PARTIAL AGONIST SALBUTAMOL
Solved by: X-RAY, Resolution: 3.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

183-474 2y04A 8%
[Model]
182-474 2y04B 8%
[Model]

2ycz: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONBOUND ANTAGONIST IODOCYANOPINDOLOL
Solved by: X-RAY, Resolution: 3.65A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

187-474 2yczA 8%
[Model]
187-474 2yczB 8%
[Model]

4ib4: CRYSTAL STRUCTURE OF THE CHIMERIC PROTEIN OF 5-HT2B-BRIL IWITH ERGOTAMINE
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

190-475 4ib4A 7%
[Model]

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.




SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.