Template Description
4fdg: STRUCTURE OF REPLICATION FACTOR X Solved by: X-RAY, Resolution: 4.10A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
160-769
4fdgB
33%
160-769
4fdgA
33%
>target
--TCKENFQRFLQCFTDPLAKEEENVGIDITQPLYMQQLGEINITGEPFLNVNCEHIKSFSKNLYRQLISYPQEVIPTFDMAVNEIFFDRYPDSILE-HQIQVRPFNALKTKSMRNLNPEDIDQLITISGMVIRTSQLIPEMQEAFFQCQVCAHTTRVEID-----RGRIAEPCSCVHCHTTHSMALIHNRSFFSDKQMIKLQESPEDMPAGQTPHTIVLFAHNDLVDKVQPGDRVNVTGIYRAVPIRVNPRVSNVKSVYKTHIDVIHYRKTDAKRLHGLDEEAEQKLFSEKRVKLLKELSRKPDIYERLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGS--SRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHREALK
>4fdgA
QIDYRDVFIEFLTTFKGN-----------NNQNKYIERINELVAYRKKSLIIEFSDVLSFNENLAYEIINNTKIILPILEGALYDHILQLDPTYQRDIEKVHVRIVGIPRVIELRKIRSTDIGKLITIDGILVKVTPVKERIYKATYKHIHPDCMQEFEWPEDEEMPEVLEMPTICPKCGKPGQFRLIPEKTKLIDWQKAVIQERPEEVPSGQLPRQLEIILEDDLVDSARPGDRVKVTGILDIKQDS--PVKRGSRAVFDIYMKVSSIEVSQK--------VLDEVIISEEDEKKIKDLAKDPWIRDRIISSIAPSIYGHWELKEALALALFGGVPKVLED---TRIRGDIHILIIGDPGTAKSQMLQFISRVAPRAVYTTGKGSTAAGLTAAVVREKGTGEYYLEAGALVLADGGIAVIDEIDKMRDEDRVAIHEAMEQQTVSIAKAGIVAKLNARAAVIAAGNPKFGRYISERPVSDNINLPPTILSRFDLIFILKDQPGE-QDRELANYILDVHSGKS---TKNIIDIDTLRKYIAYARKYVTPKITSEAKNLITDFFVEMRKKSSETPDSPILITPRQLEALIRISEAYAKMALKAEVTREDAERAINIMRLFLE
[Model]
160-769
4fdgC
33%
>target
--TCKENFQRFLQCFTDPLAKEEENVGIDITQPLYMQQLGEINITGEPFLNVNCEHIKSFSKNLYRQLISYPQEVIPTFDMAVNEIFFDRYPDSILE-HQIQVRPFNALKTKSMRNLNPEDIDQLITISGMVIRTSQLIPEMQEAFFQCQVCAHTTRVEID-----RGRIAEPCSCVHCHTTHSMALIHNRSFFSDKQMIKLQESPEDMPAGQTPHTIVLFAHNDLVDKVQPGDRVNVTGIYRAVPIRVNPRVSNVKSVYKTHIDVIHYRKTDAKRLHGLDEEAEQKLFSEKRVKLLKELSRKPDIYERLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGS--SRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHREALK
>4fdgC
QIDYRDVFIEFLTTFKGN-----------NNQNKYIERINELVAYRKKSLIIEFSDVLSFNENLAYEIINNTKIILPILEGALYDHILQLDPTYQRDIEKVHVRIVGIPRVIELRKIRSTDIGKLITIDGILVKVTPVKERIYKATYKHIHPDCMQEFEWPEDEEMPEVLEMPTICPKCGKPGQFRLIPEKTKLIDWQKAVIQERPEEVPSGQLPRQLEIILEDDLVDSARPGDRVKVTGILDIKQDS--PVKRGSRAVFDIYMKVSSIEVSQK--------VLDEVIISEEDEKKIKDLAKDPWIRDRIISSIAPSIYGHWELKEALALALFGGVPKVLED---TRIRGDIHILIIGDPGTAKSQMLQFISRVAPRAVYTTGKGSTAAGLTAAVVREKGTGEYYLEAGALVLADGGIAVIDEIDKMRDEDRVAIHEAMEQQTVSIAKAGIVAKLNARAAVIAAGNPKFGRYISERPVSDNINLPPTILSRFDLIFILKDQPGE-QDRELANYILDVHSGKS---TKNIIDIDTLRKYIAYARKYVTPKITSEAKNLITDFFVEMRKKSSETPDSPILITPRQLEALIRISEAYAKMALKAEVTREDAERAINIMRLFLE
[Model]
160-769
4fdgD
33%
>target
--TCKENFQRFLQCFTDPLAKEEENVGIDITQPLYMQQLGEINITGEPFLNVNCEHIKSFSKNLYRQLISYPQEVIPTFDMAVNEIFFDRYPDSILE-HQIQVRPFNALKTKSMRNLNPEDIDQLITISGMVIRTSQLIPEMQEAFFQCQVCAHTTRVEID-----RGRIAEPCSCVHCHTTHSMALIHNRSFFSDKQMIKLQESPEDMPAGQTPHTIVLFAHNDLVDKVQPGDRVNVTGIYRAVPIRVNPRVSNVKSVYKTHIDVIHYRKTDAKRLHGLDEEAEQKLFSEKRVKLLKELSRKPDIYERLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGS--SRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHREALK
>4fdgD
QIDYRDVFIEFLTTFKGN-----------NNQNKYIERINELVAYRKKSLIIEFSDVLSFNENLAYEIINNTKIILPILEGALYDHILQLDPTYQRDIEKVHVRIVGIPRVIELRKIRSTDIGKLITIDGILVKVTPVKERIYKATYKHIHPDCMQEFEWPEDEEMPEVLEMPTICPKCGKPGQFRLIPEKTKLIDWQKAVIQERPEEVPSGQLPRQLEIILEDDLVDSARPGDRVKVTGILDIKQDS--PVKRGSRAVFDIYMKVSSIEVSQK--------VLDEVIISEEDEKKIKDLAKDPWIRDRIISSIAPSIYGHWELKEALALALFGGVPKVLED---TRIRGDIHILIIGDPGTAKSQMLQFISRVAPRAVYTTGKGSTAAGLTAAVVREKGTGEYYLEAGALVLADGGIAVIDEIDKMRDEDRVAIHEAMEQQTVSIAKAGIVAKLNARAAVIAAGNPKFGRYISERPVSDNINLPPTILSRFDLIFILKDQPGE-QDRELANYILDVHSGKS---TKNIIDIDTLRKYIAYARKYVTPKITSEAKNLITDFFVEMRKKSSETPDSPILITPRQLEALIRISEAYAKMALKAEVTREDAERAINIMRLFLE
[Model]
160-769
4fdgE
33%
>target
--TCKENFQRFLQCFTDPLAKEEENVGIDITQPLYMQQLGEINITGEPFLNVNCEHIKSFSKNLYRQLISYPQEVIPTFDMAVNEIFFDRYPDSILE-HQIQVRPFNALKTKSMRNLNPEDIDQLITISGMVIRTSQLIPEMQEAFFQCQVCAHTTRVEID-----RGRIAEPCSCVHCHTTHSMALIHNRSFFSDKQMIKLQESPEDMPAGQTPHTIVLFAHNDLVDKVQPGDRVNVTGIYRAVPIRVNPRVSNVKSVYKTHIDVIHYRKTDAKRLHGLDEEAEQKLFSEKRVKLLKELSRKPDIYERLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGS--SRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHREALK
>4fdgE
QIDYRDVFIEFLTTFKGN-----------NNQNKYIERINELVAYRKKSLIIEFSDVLSFNENLAYEIINNTKIILPILEGALYDHILQLDPTYQRDIEKVHVRIVGIPRVIELRKIRSTDIGKLITIDGILVKVTPVKERIYKATYKHIHPDCMQEFEWPEDEEMPEVLEMPTICPKCGKPGQFRLIPEKTKLIDWQKAVIQERPEEVPSGQLPRQLEIILEDDLVDSARPGDRVKVTGILDIKQDS--PVKRGSRAVFDIYMKVSSIEVSQK--------VLDEVIISEEDEKKIKDLAKDPWIRDRIISSIAPSIYGHWELKEALALALFGGVPKVLED---TRIRGDIHILIIGDPGTAKSQMLQFISRVAPRAVYTTGKGSTAAGLTAAVVREKGTGEYYLEAGALVLADGGIAVIDEIDKMRDEDRVAIHEAMEQQTVSIAKAGIVAKLNARAAVIAAGNPKFGRYISERPVSDNINLPPTILSRFDLIFILKDQPGE-QDRELANYILDVHSGKS---TKNIIDIDTLRKYIAYARKYVTPKITSEAKNLITDFFVEMRKKSSETPDSPILITPRQLEALIRISEAYAKMALKAEVTREDAERAINIMRLFLE
[Model]
3f9v: CRYSTAL STRUCTURE OF A NEAR FULL-LENGTH ARCHAEAL MCM: FUNCTIONAL INSIGHTS FOR AN AAA+ HEXAMERIC HELICASE Solved by: X-RAY, Resolution: 4.35A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
160-771
3f9vA
32%
>target
--TCKENFQRFLQCFTDPLAKEEENVGIDITQPLYMQQLGEINITGEPFLNVNCEHIKSFSKNLYRQLISYPQEVIPTFDMAVNEIFFDRYPDSILE-HQIQVRPFNALKTKSMRNLNPEDIDQLITISGMVIRTSQLIPEMQEAFFQCQVCAHTTRVEIDR-----GRIAEPCSCVHCHTTHSMALIHNRSFFSDKQMIKLQESPEDMPAGQTPHTIVLFAHNDLVDKVQPGDRVNVTGIYRAVPIRVNPRVSNVKSVYKTHIDVIHYRKTDAKRLHGLDEEAEQKLFSEKRVKLLKELSRKPDIYERLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGS--SRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHREALKQS-
>3f9vA
QIDYRDVFIEFLTTFKGN-----------NNQNKYIERINELVAYRKKSLIIEFSDVLSFNENLAYEIINNTKIILPILEGALYDHILQLDPTYQRDIEKVHVRIVGIPRVIELRKIRSTDIGKLITIDGILVKVTPVKERIYKATYKHIHPDCMQEFEWPEDEEMPEVLEMPTICPKCGKPGQFRLIPEKTKLIDWQKAVIQERPEEVPSGQLPRQLEIILEDDLVDSARPGDRVKVTGILDIKQ--DSPVKRGSRAVFDIYMKVSSIEVSQKV--------LDEVIISEEDEKKIKDLAKDPWIRDRIISSIAPSIYGHWELKEALALALFGGVPKVLED---TRIRGDIHILIIGDPGTAKSQMLQFISRVAPRAVYTTGKGSTAAGLTAAVVREKGTGEYYLEAGALVLADGGIAVIDEIDKMRDEDRVAIHEAMEQQTVSIAKAGIVAKLNARAAVIAAGNPKFGRYISERPVSDNINLPPTILSRFDLIFILKDQPG-EQDRELANYILDVHSGK---STKNIIDIDTLRKYIAYARKYVTPKITSEAKNLITDFFVEMRKKSSETPDSPILITPRQLEALIRISEAYAKMALKAEVTREDAERAINIMRLFLESVG
[Model]
1ltl: THE DODECAMER STRUCTURE OF MCM FROM ARCHAEAL M. THERMOAUTOTROPHICUM Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
161-422
1ltlA
23%
>target
--CKENFQRFLQCFTDPLAKEEENVGIDITQPLYMQQLGEINIT--GEPFLNVNCEHIKSFSKNLYRQLISYPQEVIPTFDMAVNEIFFDRYPDSILEHQIQVRPFNALKTKSMRNLNPEDIDQLITISGMVIRTSQLIPEMQEAFFQCQVCAHTTRVEIDRGRIAEPCSCVHCHTTHSMALIHNRSFFSDKQMIKLQESPEDMPAGQTPHTIVLFAHNDLVDKVQPGDRVNVTGIYRAVPIRVNPRVSNVKSVYKTHIDVIHYRK-
>1ltlA
VDKSKTLTKFEEFFSL---------------QDYKDRVFEAIEKYPNVRSIEVDYLDLEMFDPDLADLLIEKPDDVIRAAQQAIRNIDRL-----RKNVDLNIRFSGISNVIPLRELRSKFIGKFVAVDGIVRKTDEIRPRIVKAVFECRGCMRHHAVTQSTNMITEPSLCSECGGR-SFRLLQDESEFLDTQTLKLQEPLENLSGGEQPRQITVVLEDDLVDTLTPGDIVRVTGTLRTVRDER-------TKRFKNFIYGNYTEFL
[Model]
161-422
1ltlB
23%
>target
--CKENFQRFLQCFTDPLAKEEENVGIDITQPLYMQQLGEINIT--GEPFLNVNCEHIKSFSKNLYRQLISYPQEVIPTFDMAVNEIFFDRYPDSILEHQIQVRPFNALKTKSMRNLNPEDIDQLITISGMVIRTSQLIPEMQEAFFQCQVCAHTTRVEIDRGRIAEPCSCVHCHTTHSMALIHNRSFFSDKQMIKLQESPEDMPAGQTPHTIVLFAHNDLVDKVQPGDRVNVTGIYRAVPIRVNPRVSNVKSVYKTHIDVIHYRK-
>1ltlB
VDKSKTLTKFEEFFSL---------------QDYKDRVFEAIEKYPNVRSIEVDYLDLEMFDPDLADLLIEKPDDVIRAAQQAIRNIDRL-----RKNVDLNIRFSGISNVIPLRELRSKFIGKFVAVDGIVRKTDEIRPRIVKAVFECRGCMRHHAVTQSTNMITEPSLCSECGGR-SFRLLQDESEFLDTQTLKLQEPLENLSGGEQPRQITVVLEDDLVDTLTPGDIVRVTGTLRTVRDER-------TKRFKNFIYGNYTEFL
[Model]
161-422
1ltlC
23%
>target
--CKENFQRFLQCFTDPLAKEEENVGIDITQPLYMQQLGEINIT--GEPFLNVNCEHIKSFSKNLYRQLISYPQEVIPTFDMAVNEIFFDRYPDSILEHQIQVRPFNALKTKSMRNLNPEDIDQLITISGMVIRTSQLIPEMQEAFFQCQVCAHTTRVEIDRGRIAEPCSCVHCHTTHSMALIHNRSFFSDKQMIKLQESPEDMPAGQTPHTIVLFAHNDLVDKVQPGDRVNVTGIYRAVPIRVNPRVSNVKSVYKTHIDVIHYRK-
>1ltlC
VDKSKTLTKFEEFFSL---------------QDYKDRVFEAIEKYPNVRSIEVDYLDLEMFDPDLADLLIEKPDDVIRAAQQAIRNIDRL-----RKNVDLNIRFSGISNVIPLRELRSKFIGKFVAVDGIVRKTDEIRPRIVKAVFECRGCMRHHAVTQSTNMITEPSLCSECGGR-SFRLLQDESEFLDTQTLKLQEPLENLSGGEQPRQITVVLEDDLVDTLTPGDIVRVTGTLRTVRDER-------TKRFKNFIYGNYTEFL
[Model]
161-422
1ltlD
23%
>target
--CKENFQRFLQCFTDPLAKEEENVGIDITQPLYMQQLGEINIT--GEPFLNVNCEHIKSFSKNLYRQLISYPQEVIPTFDMAVNEIFFDRYPDSILEHQIQVRPFNALKTKSMRNLNPEDIDQLITISGMVIRTSQLIPEMQEAFFQCQVCAHTTRVEIDRGRIAEPCSCVHCHTTHSMALIHNRSFFSDKQMIKLQESPEDMPAGQTPHTIVLFAHNDLVDKVQPGDRVNVTGIYRAVPIRVNPRVSNVKSVYKTHIDVIHYRK-
>1ltlD
VDKSKTLTKFEEFFSL---------------QDYKDRVFEAIEKYPNVRSIEVDYLDLEMFDPDLADLLIEKPDDVIRAAQQAIRNIDRL-----RKNVDLNIRFSGISNVIPLRELRSKFIGKFVAVDGIVRKTDEIRPRIVKAVFECRGCMRHHAVTQSTNMITEPSLCSECGGR-SFRLLQDESEFLDTQTLKLQEPLENLSGGEQPRQITVVLEDDLVDTLTPGDIVRVTGTLRTVRDER-------TKRFKNFIYGNYTEFL
[Model]
191-422
1ltlE
25%
>target
--------------------LYMQQLGEINIT--GEPFLNVNCEHIKSFSKNLYRQLISYPQEVIPTFDMAVNEIFFDRYPDSILEHQIQVRPFNALKTKSMRNLNPEDIDQLITISGMVIRTSQLIPEMQEAFFQCQVCAHTTRVEIDRGRIAEPCSCVHCHTTHSMALIHNRSFFSDKQMIKLQESPEDMPAGQTPHTIVLFAHNDLVDKVQPGDRVNVTGIYRAVPIRVNPRVSNVKSVYKTHIDVIHYRK-
>1ltlE
MKTVDKSKTLTKFEEFFSLQDYKDRVFEAIEKYPNVRSIEVDYLDLEMFDPDLADLLIEKPDDVIRAAQQAIRNIDRL-----RKNVDLNIRFSGISNVIPLRELRSKFIGKFVAVDGIVRKTDEIRPRIVKAVFECRGCMRHHAVTQSTNMITEPSLCSECGGR-SFRLLQDESEFLDTQTLKLQEPLENLSGGEQPRQITVVLEDDLVDTLTPGDIVRVTGTLRTVRDER-------TKRFKNFIYGNYTEFL
[Model]
161-422
1ltlF
23%
>target
--CKENFQRFLQCFTDPLAKEEENVGIDITQPLYMQQLGEINIT--GEPFLNVNCEHIKSFSKNLYRQLISYPQEVIPTFDMAVNEIFFDRYPDSILEHQIQVRPFNALKTKSMRNLNPEDIDQLITISGMVIRTSQLIPEMQEAFFQCQVCAHTTRVEIDRGRIAEPCSCVHCHTTHSMALIHNRSFFSDKQMIKLQESPEDMPAGQTPHTIVLFAHNDLVDKVQPGDRVNVTGIYRAVPIRVNPRVSNVKSVYKTHIDVIHYRK-
>1ltlF
VDKSKTLTKFEEFFSL---------------QDYKDRVFEAIEKYPNVRSIEVDYLDLEMFDPDLADLLIEKPDDVIRAAQQAIRNIDRL-----RKNVDLNIRFSGISNVIPLRELRSKFIGKFVAVDGIVRKTDEIRPRIVKAVFECRGCMRHHAVTQSTNMITEPSLCSECGGR-SFRLLQDESEFLDTQTLKLQEPLENLSGGEQPRQITVVLEDDLVDTLTPGDIVRVTGTLRTVRDER-------TKRFKNFIYGNYTEFL
[Model]
2vl6: STRUCTURAL ANALYSIS OF THE SULFOLOBUS SOLFATARICUS MCM PROTEIN N-TERMINAL DOMAIN Solved by: X-RAY, Resolution: 2.8A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
160-422
2vl6C
22%
>target
--TCKENFQRFLQCFTDPLAKEEENVGIDITQPLYMQQLGEINITGEPFLNVNCEHIKSFSKNLYRQLISYPQEVIPTFDMAVNEIFFDRYPDSILE-HQIQVRPFNALKTKSMRNLNPEDIDQLITISGMVIRTSQLIPEMQEAFFQCQVCAHTTRVEIDR-----GRIAEPCSCVHCHTTHSMALIHNRSFFSDKQMIKLQESPEDMPAGQTPHTIVLFAHNDLVDKVQPGDRVNVTGIYRAVPIRVNPRVSNVKSVYKTHIDVIHYRK-
>2vl6C
QIDYRDVFIEFLTTFKGN-----------NNQNKYIERINELVAYRKKSLIIEFSDVLSFNENLAYEIINNTKIILPILEGALYDHILQLDPTYQRDIEKVHVRIVGIPRVIELRKIRSTDIGKLITIDGILVKVTPVKERIYKATYKHIHPDCMQEFEWPEDEEMPEVLEMPTICPKCGKPGQFRLIPEKTKLIDWQKAVIQERPEEVPSGQLPRQLEIILEDDLVDSARPGDRVKVTGILDIKQ--DSPVKRGSRAVFDIYMKVSSIEVS
[Model]
160-422
2vl6B
22%
>target
--TCKENFQRFLQCFTDPLAKEEENVGIDITQPLYMQQLGEINITGEPFLNVNCEHIKSFSKNLYRQLISYPQEVIPTFDMAVNEIFFDRYPDSILE-HQIQVRPFNALKTKSMRNLNPEDIDQLITISGMVIRTSQLIPEMQEAFFQCQVCAHTTRVEIDR-----GRIAEPCSCVHCHTTHSMALIHNRSFFSDKQMIKLQESPEDMPAGQTPHTIVLFAHNDLVDKVQPGDRVNVTGIYRAVPIRVNPRVSNVKSVYKTHIDVIHYRK-
>2vl6B
QIDYRDVFIEFLTTFKGN-----------NNQNKYIERINELVAYRKKSLIIEFSDVLSFNENLAYEIINNTKIILPILEGALYDHILQLDPTYQRDIEKVHVRIVGIPRVIELRKIRSTDIGKLITIDGILVKVTPVKERIYKATYKHIHPDCMQEFEWPEDEEMPEVLEMPTICPKCGKPGQFRLIPEKTKLIDWQKAVIQERPEEVPSGQLPRQLEIILEDDLVDSARPGDRVKVTGILDIKQ--DSPVKRGSRAVFDIYMKVSSIEVS
[Model]
160-422
2vl6A
22%
>target
--TCKENFQRFLQCFTDPLAKEEENVGIDITQPLYMQQLGEINITGEPFLNVNCEHIKSFSKNLYRQLISYPQEVIPTFDMAVNEIFFDRYPDSILE-HQIQVRPFNALKTKSMRNLNPEDIDQLITISGMVIRTSQLIPEMQEAFFQCQVCAHTTRVEIDR-----GRIAEPCSCVHCHTTHSMALIHNRSFFSDKQMIKLQESPEDMPAGQTPHTIVLFAHNDLVDKVQPGDRVNVTGIYRAVPIRVNPRVSNVKSVYKTHIDVIHYRK-
>2vl6A
QIDYRDVFIEFLTTFKGN-----------NNQNKYIERINELVAYRKKSLIIEFSDVLSFNENLAYEIINNTKIILPILEGALYDHILQLDPTYQRDIEKVHVRIVGIPRVIELRKIRSTDIGKLITIDGILVKVTPVKERIYKATYKHIHPDCMQEFEWPEDEEMPEVLEMPTICPKCGKPGQFRLIPEKTKLIDWQKAVIQERPEEVPSGQLPRQLEIILEDDLVDSARPGDRVKVTGILDIKQ--DSPVKRGSRAVFDIYMKVSSIEVS
[Model]
3kds: APO-FTSH CRYSTAL STRUCTURE Solved by: X-RAY, Resolution: 2.60A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-667
3kdsE
20%
>target
------SIYEHEDIKKGILL--QLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMN---ESTR--SVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLS--RFDLIFLMLDPQDEAYDRRLAHHLVS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3kdsE
KRVTFKDVGGAEEAIEELKEVVEFLKDPS-KFNRIG---ARMPKGILLVGPPGTGATLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLFA-----QAKA---HAPCIVFIDEIDAVGRHDEREQTLNQLLVEMDGFD---SKE--------GIIVMAATNRP-------------DILDPALLRPGRFDKKIVV-DPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVIAGPARKSLLISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIPRGYKALGYTLHLPEEDKYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGKRLRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILSE
[Model]
504-666
3kdsG
22%
>target
----------------------------------------NILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMN---ESTR--SVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLL--SRFDLIFLMLDPQDEAYDRRLAHHLV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3kdsG
KRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGATLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLFA-----QAKA---HAPCIVFIDEIDAVGRHDEREQTLNQLLVEMDGFD---S--------KEGIIVMAATNRP-------------DILDPALLRPGRFDKKIVV-DPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVIAGPARKSLLISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIPRGYKALGYTLHLPEEDKYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGKLRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILSE
[Model]
504-666
3kdsF
22%
>target
----------------------------------------NILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMN---ESTR--SVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLS--RFDLIFLMLDPQDEAYDRRLAHHLV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3kdsF
KRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGATLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLFA-----QAKA---HAPCIVFIDEIDAVGRHDEREQTLNQLLVEMDGFD---S--------KEGIIVMAATNRP-------------DILDPALLRPGRFDKKIVV-DPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVIAGPARKSLLISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIPRGYKALGYTLHLPEEDKYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGKLRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILS
[Model]
2rko: CRYSTAL STRUCTURE OF THE VPS4P-DIMER Solved by: X-RAY, Resolution: 3.35A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-661
2rkoA
20%
>target
-----SIYEHEDIKKGILLQLFGG--TRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKGSSAV-GLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSV--LHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRL---------------------------------------------------------------------------------------------------------------------
>2rkoA
NVKWEDVAGLEGAKEALKEAVILPVKFPHLFK-GN---RKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSS--SDLVSGESEKLVKQ-----LFAMAR---ENKPSIIFIDEVDALTASRRIKTELLVQMNG---------V-----QGVLVLGATNIPW-------------QLDSAIRRRFERRIY-IPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVLTPCSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDFG
[Model]
3f8t: CRYSTAL STRUCTURE ANALYSIS OF A FULL-LENGTH MCM HOMOLOG FROM METHANOPYRUS KANDLERI Solved by: X-RAY, Resolution: 1.90A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
158-772
3f8tA
20%
>target
-VATCKENFQRFLQCFTDPLAKEEENVGIDITQPLYMQQLGEINITGEPFLNVNCEHIKSFSKNLYRQLISYPQEVIPTFDMAVNEIFFDRYPDSILEHQIQVRPFNALKTKSMRNLNPEDIDQLITISGMVIRTSQLIPEMQEAFFQCQVCAHTTRVEIDRGRIAEPCSCVHCHTTHSMALIHNRSFFSDKQMIKLQESPEDMPAGQTPHTIVLFAHNDLVDKVQPGDRVNVTGIYRAVPIRVNPRVSNVKSVYKTHIDVIHYRKTDAKRLHGLDEEAEQKLFSEKRVKLLKELSRKPDIYERLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYA-HSTIMPRLSEEASQALIEAYVNMRKIG-----SSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHREALKQSA-
>3f8tA
RIGEVASRFGLPTRVLIEI-----------VRTESFQRSLARVTSGK--PVVLDL---RELDSDLASWIATHARLVEP----ALRELVRTVAPDV----EPRVRFRGLPHRFRRVERIRPMDGALISIEGVVREVRGAE----RLEHAIVDTGSEL-----------------------------------------------------------VAVRLHGHRLGPGLRVEILGIVR-----------------SATLDALEVHKKDP---------IPEVHPDPAELEEFRELADK-DPLTTFARAIAP-LPGAEEVGKMLALQLFSCVGK---------NSERLHVLLAGYPVVCSEILHHVLDHLAPRGVYVDLRRTELTDLTAVLKED---RGWALRAGAAVLADGGILAVDHLEGAPEPHRWALMEAMDKGTVTVD--GI--ALNARCAVLAAINP----GEPSDPPIARIDLDQDFLSHFDLIAFLGVP-----------------------------SYTLLRRYLLYAIREHPAPELTEEARKRLEHWYETRREEVEERLGMGLPTLPVTRRQLESVERLAKAHARMRLSDDVEPEDVDIAAELVDWYLETAMQ
[Model]
2qp9: CRYSTAL STRUCTURE OF S.CEREVISIAE VPS4 Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-661
2qp9X
19%
>target
-----SIYEHEDIKKGILLQLFGG--TRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQY-TSGKGSSAVGLTAYVMKDPETRQLVLQT-GALV-LSDNGICCIDEFDKMNEST---R--SVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRL-------------------------------------------------------------------------------------------------------------------------
>2qp9X
NVKWEDVAGLEGAKEALKEAVILPVKFPHLF-KGNRKP---TSGILLYGPPGTGKSYLAKAVATEANSTFFSVSS--SDLVS------K--W-SEKLVKQLFAMARENKPSIIFIDQVDALTGSEASRRIKTELLVQMNG-------------VGQGVLVLGATNIPW-------------QLDSAIRRRFERRIYI-PLPDLAARTTMFEINVGDTPSVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSTRKLTPSSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDFG
[Model]
3hte: CRYSTAL STRUCTURE OF NUCLEOTIDE-FREE HEXAMERIC CLPX Solved by: X-RAY, Resolution: 4.03A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
465-712
3hteA
14%
>target
------------LAPSIYEHEDIKKGILLQLFGGTRKD-FSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPET---RQ-LVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGII--CQLNARTSVLAAANPIESQ-------WNPKK-TTI------E--NIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAH-STIMPRLSEEASQALIEA------------------------------------------------------
>3hteA
SALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMAD----ATTLTAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDQIDKISRVSGEGVQQALLKLIEGTEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNE-LSEEALIQILKEPK----------------NALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSKPLLIYGK
[Model]
464-738
3hteC
14%
>target
---------ALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKGSSAVGLTAYVMKDPETRQLVLQ-TGALVLSDNGICCIDEFDKMN--ESTRSVLHEVMEQQTLS---IAKAGIICQLNARTSVLAAANPIESQWN--PKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIA-YAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIR------------------------------------
>3hteC
LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKR-L-------RNGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLED--------VENIIQKLLQKCDYDVQKAQRGIVYIDQIDKISRGEGVQQALLKLIEGVDTSKILFICGG---AFAGLDKVISHRVSE-GELLAQVEPEDLIKFGLIPEFIGRLPVVATLNEL-SEEALIQILKEPKN----------------ALTKQYQALFNLEGVDLEFRDEALDAIAKKA-------MAR---KTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSKPLLIY
[Model]
466-738
3hteF
14%
>target
----------APSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSG-KGSSAVGLTAYVMKDPET--RQ-LVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGII-CQLNARTSVLAAANPIESQWNPKKT----TIE--NIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYA-HSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIR------------------------------------
>3hteF
PTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHY-K----R--LR-NGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAG---YVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDQIDKISGEGVQQALLKLIEGTDTSKILFICGGAFAGLDKVISHRVKSDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNEL-SEEALIQILKEPKNA----------------LTKQYQALFNLEGVDLEFRDEALDAIAKKAM----------ARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSKPLLIY
[Model]
460-752
3hteE
14%
>target
-----RLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNE--STRSVLHEVMEQQTLS---IAKAGIICQLNARTSVLAAANP-IESQWNPKKT-TIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAY-AHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIR--LAEAHAKVRFSNKV--------------------------
>3hteE
LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRL-RNGSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTM-ADATTLTGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDQIDKISRGEGVQQALLKLIEGTDTSKILFICGGA---FAGLDKVISHRVESEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLN-ELSEEALIQILKEPKN----------------ALTKQYQALFNLEGVDLEFRDEALDAIAKKAMA-------R---KTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSKPLLIYGKPEAQ
[Model]
466-753
3hteB
14%
>target
-----------APSIYEHEDIKKGILLQLFGGTRKDFSHTG--RGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPET---RQLV-LQTGALVLSDNGICCIDEFDKMN---ESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPI-----ESQWNPKKT--T-------IENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIA-YAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIR--LAEAHAKVRFSNKVE-------------------
>3hteB
LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYK-RLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTM-ADAT---TLTEGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDQIDKISRSGEGVQQALLKLIEGTLQVDTSK-IL--FICGGAFAGLDKVISHRVETGSDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNE-LSEEALIQILK----EPK------------NALTKQYQALFNLEGVDLEFRDEALDAIAKKAM-------AR---KTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSKPLLIY
[Model]
468-594
3hteD
19%
>target
-------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRG--KFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKGSSAVGLTAY-VMKDPET--RQL-VLQTGALVLSDNGICCIDEFDKMNE-----STRSVLHEVMEQQT-----------------------------------------------------------------------------------------------------------------------------------------------------------
>3hteD
LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHY-KRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADA-----TTLTEAYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDQIDKISRKSSGEGVQQALLKLIEGTDTSKILFICGGAFAGLDKVISHRVESEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMDVEKVVIDESVIDGQSKPLLIY
[Model]
2zao: CRYSTAL STRUCTURE OF MOUSE SKD1/VPS4B ADP-FORM Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-661
2zaoA
18%
>target
-----------SIYEHEDIKKGILLQLFGGT--RKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNES-----------TRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRL---------------------------------------------------------------------------------------------------------------------------------------
>2zaoA
IVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFT-GKRTPWRG---ILLFGPPGTGKSYLAKAVATEANNSTFFSISSSSEKLV-----KN-----LFQLARE---NKPSIIFIDEIDSLCGSRSENESEAARRIKTEFLVQMQ---------GV-GVDNDGILVLGATNIPW-------------VLDSAIRRRFEKRIY-IPLPEAHARAAMFRLHLGSTQNSLTEADFQELGRKTDGYSGADISIIVRDALMQPVRKVQSATHFKKVRGPSRADPNCIVNDLLTPCSPGDPGAIEMTWMDVPGDKLLEPVVSMWDMLRSLSSTKPTVNEQDLLKLKKFTEDFGQEG
[Model]
2ce7: EDTA TREATED Solved by: X-RAY, Resolution: 2.75A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
504-667
2ce7C
22%
>target
----------------------------------------------NILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNEST-RSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLS--RFDLIFLMLDPQDEAYDRRLAHHLVS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2ce7C
YKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLF-----AQAKAH---APCIVFIDEIDAVGREQTLNQLLVEMDGFD---S--------KEGIIVMAATNRP-----------D--ILDPALLRPGRFDKKIVV-DPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVILISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIPRGYKALGYTLHLPEEDKYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILSEEFE
[Model]
504-666
2ce7A
22%
>target
----------------------------------------------NILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNE---STR--SVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLS--RFDLIFLMLDPQDEAYDRRLAHHLV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2ce7A
YKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLF-----AQAKA---HAPCIVFIDEIDAVGRHDEREQTLNQLLVEMDGFD---S--------KEGIIVMAATNRPD-------------ILDPALLRPGRFDKKIVV-DPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVILISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIKYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGKLRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILS
[Model]
504-783
2ce7B
18%
>target
----------------------------------------------NILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTR----SVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLS--RFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQ------------------------------VEEEFLDMAVLKDYIAYAHSTIMPRLSEE---------ASQALIEAYVNMRKIGSSRGMVS----AYPRQLESLIR--LAEAHA-KVRFSN--KVEAIDVEEAKRLHREALKQSATDPRTGIVDIS-----------------------------------------------------------------
>2ce7B
YKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLFA-----QAKA---HAPCIVFIDEIDAVGRDEREQTLNQLLVEMDG---------FD--SKEGIIVMAATNRP-------------DILDPALLRPGRFDKKIVV-DPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVIA-GPLLISPAEKRIIAYHEAGHAVVSTVVP---NGEPVHRISIIYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGKLRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILSEEF
[Model]
468-666
2ce7E
20%
>target
----------SIYEHEDIKKGIL--LQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNEST----RSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLS--RFDLIFLMLDPQDEAYDRRLAHHLV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2ce7E
PSGNKRVTFKDVGGAEEAIEELKEVVEFLKDP-SKFNRIG-ARM--PKGILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLFA-----QAKA---HAPCIVFIDEIDAVGRHEREQTLNQLLVEMDG---------FD--SKEGIIVMAATNRP-----------D--ILDPALLRPGRFDKKIVV-DPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVIALLISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIKYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGKLRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILS
[Model]
504-667
2ce7D
24%
>target
----------------------------------------------NILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRS--VLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLS--RFDLIFLMLDPQDEAYDRRLAHHLVS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2ce7D
YKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLFA-----QAKA---HAPCIVFIDEIDAVGEREQTLNQLLVEMDGFD---SKEG--------IIVMAATNRP-------------DILDPALLRPGRFDKKIVV-DPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVIAKSLLISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIPRGYYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGLRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILSEEFE
[Model]
504-780
2ce7F
18%
>target
----------------------------------------------NILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRS----VLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLS--RFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQV------EEEFLDMAVLKDYIAY----A-HSTIMPRL-----------------------SEEASQALIEAYVNM----RKI-----GSSRGMVSAYPRQLESLIRLA--EAHA-KVRFSN--KVEAIDVEEAKRLHREALKQSATDPRTGIV------------------------------------------------------------------
>2ce7F
YKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLFA-----QAKA---HAPCIVFIDEIDAVGRDEREQTLNQLLVEMDGF---DS--------KEGIIVMAATNRPD-------------ILDPALLRPGRFDKKIVV-DPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREG-RDKITMKDFEEAIDRVIISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIPRGYKALGYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILSEEF
[Model]
2zam: CRYSTAL STRUCTURE OF MOUSE SKD1/VPS4B APO-FORM Solved by: X-RAY, Resolution: 3.50A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-665
2zamA
18%
>target
------------SIYEHEDIKKGILLQLFGGT--RKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRS--VLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHL-----------------------------------------------------------------------------------------------------------------------------------
>2zamA
AIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFT-GKRTPWRG---ILLFGPPGTGKSYLAKAVATEANNSTFFSISSSD---LVSS---EKLVKNLFQLAR---ENKPSIIFIDEIDSSEAARRIKTEFLVQMQ---------GVG-VDNDGILVLGATNIPW-------------VLDSAIRRRFEKRIY-IPLPEAHARAAMFRLHLGSTQNSLTEADFQELGRKTDGYSGADISIIVRDALMQPVRKVQSATHFKKVRGPSRADPNCIVNDLLTPCSPGDPGAIEMTWMDVPGDKLLEPVVSMWDMLRSLSSTKPTVNEQDLLKLKKFTEDFGQEG
[Model]
2zan: CRYSTAL STRUCTURE OF MOUSE SKD1/VPS4B ATP-FORM Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-661
2zanA
18%
>target
-----------SIYEHEDIKKGILLQLFGGT--RKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNES-----------TRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRL---------------------------------------------------------------------------------------------------------------------------------------
>2zanA
IVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFT-GKRTPWRG---ILLFGPPGTGKSYLAKAVATEANNSTFFSISSSSEKLV-----KN-----LFQLARE---NKPSIIFIDEIDSLCGSRSENESEAARRIKTEFLVQMQ---------GV-GVDNDGILVLGATNIPW-------------VLDSAIRRRFEKRIY-IPLPEAHARAAMFRLHLGSTQNSLTEADFQELGRKTDGYSGADISIIVRDALMQPVRKVQSATHFKKVRGPSRADPNCIVNDLLTPCSPGDPGAIEMTWMDVPGDKLLEPVVSMWDMLRSLSSTKPTVNEQDLLKLKKFTEDFGQEG
[Model]
1um8: CRYSTAL STRUCTURE OF HELICOBACTER PYLORI CLPX Solved by: X-RAY, Resolution: 2.60A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
502-599
1um8A
18%
>target
-------------------------------------------------------------------EINILLCGDPGTSKSQLLQYVYNLVPRGQYT-SGKG----SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>1um8A
LLSYIPAPKELKAVLDNYVIGQEQAKKVFSVAVYNHYKRLSFKEKLKKQDNQDSNVELEHLEEVELSKSNILLIGPTGSGKTLMAQTLAKHLDIPIAISDATSLTVENILTRLLQA------------SDWNVQKAQKGIVFIDEIDKIGEGVQQALLKIVEGSLVNQIDTSDILFICAGAFDGLAEIIKKRTTQNVLGFTQEKMSKKEQEAILHLVQTHDLVTYGLIPELIGRLPVLSTLDSISLEAMVDILQKPKNALIKQYQQLFKMDEVDLIFEEEAIKEIAQLALERKTGARGLRAIIEDFCLDIMFDLPKLKGSEVRITKDCVLKQAEPLIIA
[Model]
2qpa: CRYSTAL STRUCTURE OF S.CEREVISIAE VPS4 IN THE PRESENCE OF ADP Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-663
2qpaA
19%
>target
---------------SIYEHEDIKKGILLQLFGGT--RKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQY-TSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTR--SVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAH------------------------------------------------------------------------------------------------------------------------------
>2qpaA
LSSAILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLF-KGNRKPTS---GILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQ-----LFAMAR---ENKPSIIFIDQVDALTASRRIKTELLVQMNGV-------------SQGVLVLGATNIPW-------------QLDSAIRRRFERRIYI-PLPDLAARTTMFEINVGDTPSVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSTEDDETRKLTPSSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDFGQE
[Model]
468-661
2qpaC
20%
>target
-----------SIYEHEDIKKGILLQLFGG--TRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRL-----------------------------------------------------------------------------------------------------------------------------
>2qpaC
ILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLF-KGNRKPTS---GILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVK-----QLFAMARE---NKPSIIFIDQVDALTASRR-IKTELLVQ----MN--GV------GVLVLGATNIPW-------------QLDSAIRRRFERRIYI-PLPDLAARTTMFEINVGDTPSVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSTEDDETRKLTPSSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDF
[Model]
468-666
2qpaB
18%
>target
---------------SIYEHEDIKKGILLQLF--GGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQY-TSGKGSSAVGLTAYVMKDPETRQLVLQTGALVL--------SDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLV---------------------------------------------------------------------------------------------------------------------------
>2qpaB
LSSAILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLFK-GNRKPTS---GILLYGPPGTGKSYLAKAVATEANSTFFSVSSSD--------------LVSKWMGESEKLVKQLFAMARENKPSIIFIDQVDALTASRR-IKTELLVQ----MN--GV------GVLVLGATNIPW-------------QLDSAIRRRFERRIYI-PLPDLAARTTMFEINVGDTPSVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSTEDDETRKLTPSSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDFGQE
[Model]
2cea: WILDTYPE Solved by: X-RAY, Resolution: 2.75A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
504-667
2ceaC
22%
>target
----------------------------------------------NILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNEST-RSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLS--RFDLIFLMLDPQDEAYDRRLAHHLVS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2ceaC
YKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLF-----AQAKAH---APCIVFIDEIDAVGREQTLNQLLVEMDGFD---S--------KEGIIVMAATNRP-----------D--ILDPALLRPGRFDKKIVV-DPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVILISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIPRGYKALGYTLHLPEEDKYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILSEEFE
[Model]
504-666
2ceaA
22%
>target
----------------------------------------------NILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNE---STR--SVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLS--RFDLIFLMLDPQDEAYDRRLAHHLV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2ceaA
YKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLF-----AQAKA---HAPCIVFIDEIDAVGRHDEREQTLNQLLVEMDGFD---S--------KEGIIVMAATNRPD-------------ILDPALLRPGRFDKKIVV-DPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVILISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIKYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGKLRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILS
[Model]
504-783
2ceaB
18%
>target
----------------------------------------------NILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTR----SVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLS--RFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQ------------------------------VEEEFLDMAVLKDYIAYAHSTIMPRLSEE---------ASQALIEAYVNMRKIGSSRGMVS----AYPRQLESLIR--LAEAHA-KVRFSN--KVEAIDVEEAKRLHREALKQSATDPRTGIVDIS-----------------------------------------------------------------
>2ceaB
YKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLFA-----QAKA---HAPCIVFIDEIDAVGRDEREQTLNQLLVEMDG---------FD--SKEGIIVMAATNRP-------------DILDPALLRPGRFDKKIVV-DPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVIA-GPLLISPAEKRIIAYHEAGHAVVSTVVP---NGEPVHRISIIYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGKLRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILSEEF
[Model]
468-666
2ceaE
20%
>target
----------SIYEHEDIKKGIL--LQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNEST----RSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLS--RFDLIFLMLDPQDEAYDRRLAHHLV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2ceaE
PSGNKRVTFKDVGGAEEAIEELKEVVEFLKDP-SKFNRIG-ARM--PKGILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLFA-----QAKA---HAPCIVFIDEIDAVGRHEREQTLNQLLVEMDG---------FD--SKEGIIVMAATNRP-----------D--ILDPALLRPGRFDKKIVV-DPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVIALLISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIKYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGKLRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILS
[Model]
504-667
2ceaD
24%
>target
----------------------------------------------NILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRS--VLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLS--RFDLIFLMLDPQDEAYDRRLAHHLVS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2ceaD
YKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLFA-----QAKA---HAPCIVFIDEIDAVGEREQTLNQLLVEMDGFD---SKEG--------IIVMAATNRP-------------DILDPALLRPGRFDKKIVV-DPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDRVIAKSLLISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIPRGYYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGLRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILSEEFE
[Model]
504-780
2ceaF
18%
>target
----------------------------------------------NILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRS----VLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLS--RFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQV------EEEFLDMAVLKDYIAY----A-HSTIMPRL-----------------------SEEASQALIEAYVNM----RKI-----GSSRGMVSAYPRQLESLIRLA--EAHA-KVRFSN--KVEAIDVEEAKRLHREALKQSATDPRTGIV------------------------------------------------------------------
>2ceaF
YKPSGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLFA-----QAKA---HAPCIVFIDEIDAVGRDEREQTLNQLLVEMDGF---DS--------KEGIIVMAATNRPD-------------ILDPALLRPGRFDKKIVV-DPPDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREG-RDKITMKDFEEAIDRVIISPAEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIPRGYKALGYLVSRNELLDKLTALLGGRAAEEVVFGDVTSGAANDIERATEIARNMVCQLGMSEELGPLAWGRNYSEEVASKIDEEVKKIVTNCYERAKEIIRKYRKQLDNIVEILLEKETIEGDELRRILSEEF
[Model]
2dhr: WHOLE CYTOSOLIC REGION OF ATP-DEPENDENT METALLOPROTEASE FTSH (G399L) Solved by: X-RAY, Resolution: 3.90A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-666
2dhrF
18%
>target
--------------SIYEHEDIKKGIL--LQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMN----ESTR--SVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLS--RFDLIFLMLDPQDEAYDRRLAHHLV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2dhrF
RARVLTEAPKVTFKDVAGAEEAKEELKEIVEFLKNPS-RFHEMG-ARI--PKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVRDLFE-----TAKR---HAPCIVFIDEIDAVGRKNDEREQTLNQLLVEMDGF--E-K--------DTAIVVMAATNRP-------------DILDPALLRPGRFDRQIAI-DAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAADRVMMLPAKKSLVLSPRDRRITAYHEAGHALAAHFLEHADGVHKVTIVPRGRALGFMMPRREDMLHWSRKRLLDQIAVALAGRAAEEIVFDDVTTGAENDFRQATELARRMITEWGMHPEFGPVAYAVREDTYLGGYDVRQYSEETAKRIDEAVRRLIEEQYQRVKALLLEKREVLERVAETLLERETLTAEEFQRVVEGLPLEAPE
[Model]
468-667
2dhrC
17%
>target
--------------SIYEHEDIKKGIL--LQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQY-TSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNE----------ST----RSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLS--RFDLIFLMLDPQDEAYDRRLAHHLVS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2dhrC
RARVLTEAPKVTFKDVAGAEEAKEELKEIVEFLKNP-SRFHEMG-A--RIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVRDLF-----ETAKR---HAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFE---K--------DTAIVVMAATNRP-----------D--ILDPALLRPGRFDRQIAI-DAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAADRVMMLPAKKSLVLSPRDRRITAYHEAGHALAAHFLEHADGVHKVTIVPRGRALGFMMPRREDMLHWSRKRLLDQIAVALAGRAAEEIVFDDVTTGAENDFRQATELARRMITEWGMHPEFGPVAYAVREDTYLGGYDVRQYSEETAKRIDEAVRRLIEEQYQRVKALLLEKREVLERVAETLLERETLTAEEFQRVVEGLPLEAPE
[Model]
468-667
2dhrE
17%
>target
--------------SIYEHEDIKKGIL--LQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQY-TSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNE----------ST----RSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLS--RFDLIFLMLDPQDEAYDRRLAHHLVS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2dhrE
RARVLTEAPKVTFKDVAGAEEAKEELKEIVEFLKNP-SRFHEMG-A--RIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVRDLF-----ETAKR---HAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFE---K--------DTAIVVMAATNRP-----------D--ILDPALLRPGRFDRQIAI-DAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAADRVMMLPAKKSLVLSPRDRRITAYHEAGHALAAHFLEHADGVHKVTIVPRGRALGFMMPRREDMLHWSRKRLLDQIAVALAGRAAEEIVFDDVTTGAENDFRQATELARRMITEWGMHPEFGPVAYAVREDTYLGGYDVRQYSEETAKRIDEAVRRLIEEQYQRVKALLLEKREVLERVAETLLERETLTAEEFQRVVEGLPLEAPE
[Model]
468-667
2dhrA
17%
>target
--------------SIYEHEDIKKGIL--LQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQY-TSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNE----------ST----RSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLS--RFDLIFLMLDPQDEAYDRRLAHHLVS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2dhrA
RARVLTEAPKVTFKDVAGAEEAKEELKEIVEFLKNP-SRFHEMG-A--RIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVRDLF-----ETAKR---HAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGFE---K--------DTAIVVMAATNRP-----------D--ILDPALLRPGRFDRQIAI-DAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAADRVMMLPAKKSLVLSPRDRRITAYHEAGHALAAHFLEHADGVHKVTIVPRGRALGFMMPRREDMLHWSRKRLLDQIAVALAGRAAEEIVFDDVTTGAENDFRQATELARRMITEWGMHPEFGPVAYAVREDTYLGGYDVRQYSEETAKRIDEAVRRLIEEQYQRVKALLLEKREVLERVAETLLERETLTAEEFQRVVEGLPLEAPE
[Model]
468-666
2dhrB
17%
>target
----------SIYEHEDIKKGIL--LQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKM----NESTRS--VLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLS--RFDLIFLMLDPQDEAYDRRLAHHLV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2dhrB
LTEAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGAR-IPK---GVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVRDLFE-----TAKR---HAPCIVFIDEIDAVGRKNDEREQTLNQLLVEMDGFE---K--------DTAIVVMAATNRPD-------------ILDPALLRPGRFDRQIAI-DAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAADRVMMLPAKKSLVLSPRDRRITAYHEAGHALAAHFLEHADGVHKVTIVPRGRALGFMMPRREDMLHWSRKRLLDQIAVALAGRAAEEIVFDDVTTGAENDFRQATELARRMITEWGMHPEFGPVAYAVREDTYLGGYDVRQYSEETAKRIDEAVRRLIEEQYQRVKALLLEKREVLERVAETLLERETLTAEEFQRVVEGLPLEAPE
[Model]
504-666
2dhrD
20%
>target
-------------------------------------------NILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKM----NESTR--SVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLS--RFDLIFLMLDPQDEAYDRRLAHHLV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>2dhrD
TEAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVRDLFE-----TAKR---HAPCIVFIDEIDAVGRKNDEREQTLNQLLVEMDGFE---K--------DTAIVVMAATNRPD-------------ILDPALLRPGRFDRQIAI-DAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAADRVMMLPAKKSLVLSPRDRRITAYHEAGHALAAHFLEHADGVHKVTIVPRGRALGFMMPRREDMLHWSRKRLLDQIAVALAGRAAEEIVFDDVTTGAENDFRQATELARRMITEWGMHPEFGPVAYAVREDTYLGGYDVRQYSEETAKRIDEAVRRLIEEQYQRVKALLLEKREVLERVAETLLERETLTAEEFQRVVEGLPLEAPE
[Model]
4eiw: WHOLE CYTOSOLIC REGION OF ATP-DEPENDENT METALLOPROTEASE FT Solved by: X-RAY, Resolution: 3.90A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-666
4eiwC
16%
>target
-------------SIYEHEDIKKGIL--LQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNES-----------T---RSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLS--RFDLIFLMLDPQDEAYDRRLAHHLV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>4eiwC
ARVLTEAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARI-PK---GVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVRDLF-----ETAKR---HAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGF-----------EKDTAIVVMAATNRP-----------D--ILDPALLRPGRFDRQIAI-DAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAADRVMMLPAKKSLVLSPRDRRITAYHEAGHALAAHFLEHADGVHKVTIVPRGRALGFMMPRREDMLHWSRKRLLDQIAVALAGRAAEEIVFDDVTTGAENDFRQATELARRMITEWGMHPEFGPVAYAVREDTYLGGYDVRQYSEETAKRIDEAVRRLIEEQYQRVKALLLEKREVLERVAETLLERETLTAEEFQRVVEGLPLEAPE
[Model]
468-666
4eiwE
16%
>target
-------------SIYEHEDIKKGIL--LQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNES-----------T---RSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLS--RFDLIFLMLDPQDEAYDRRLAHHLV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>4eiwE
ARVLTEAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARI-PK---GVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVRDLF-----ETAKR---HAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGF-----------EKDTAIVVMAATNRP-----------D--ILDPALLRPGRFDRQIAI-DAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAADRVMMLPAKKSLVLSPRDRRITAYHEAGHALAAHFLEHADGVHKVTIVPRGRALGFMMPRREDMLHWSRKRLLDQIAVALAGRAAEEIVFDDVTTGAENDFRQATELARRMITEWGMHPEFGPVAYAVREDTYLGGYDVRQYSEETAKRIDEAVRRLIEEQYQRVKALLLEKREVLERVAETLLERETLTAEEFQRVVEGLPLEAPE
[Model]
468-666
4eiwA
16%
>target
-------------SIYEHEDIKKGIL--LQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNES-----------T---RSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLS--RFDLIFLMLDPQDEAYDRRLAHHLV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>4eiwA
ARVLTEAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARI-PK---GVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVRDLF-----ETAKR---HAPCIVFIDEIDAVGRKRGSGVGGGNDEREQTLNQLLVEMDGF-----------EKDTAIVVMAATNRP-----------D--ILDPALLRPGRFDRQIAI-DAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAADRVMMLPAKKSLVLSPRDRRITAYHEAGHALAAHFLEHADGVHKVTIVPRGRALGFMMPRREDMLHWSRKRLLDQIAVALAGRAAEEIVFDDVTTGAENDFRQATELARRMITEWGMHPEFGPVAYAVREDTYLGGYDVRQYSEETAKRIDEAVRRLIEEQYQRVKALLLEKREVLERVAETLLERETLTAEEFQRVVEGLPLEAPE
[Model]
468-666
4eiwD
17%
>target
----------SIYEHEDIKKGIL--LQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKM----NESTRS--VLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLS--RFDLIFLMLDPQDEAYDRRLAHHLV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>4eiwD
LTEAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGAR-IPK---GVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVRDLFE-----TAKR---HAPCIVFIDEIDAVGRKNDEREQTLNQLLVEMDGFE---K--------DTAIVVMAATNRPD-------------ILDPALLRPGRFDRQIAI-DAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAADRVMMLPAKKSLVLSPRDRRITAYHEAGHALAAHFLEHADGVHKVTIVPRGRALGFMMPRREDMLHWSRKRLLDQIAVALAGRAAEEIVFDDVTTGAENDFRQATELARRMITEWGMHPEFGPVAYAVREDTYLGGYDVRQYSEETAKRIDEAVRRLIEEQYQRVKALLLEKREVLERVAETLLERETLTAEEFQRVVEGLPLEAPE
[Model]
468-666
4eiwF
17%
>target
----------SIYEHEDIKKGIL--LQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKM----NESTRS--VLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLS--RFDLIFLMLDPQDEAYDRRLAHHLV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>4eiwF
LTEAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGAR-IPK---GVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVRDLFE-----TAKR---HAPCIVFIDEIDAVGRKNDEREQTLNQLLVEMDGFE---K--------DTAIVVMAATNRPD-------------ILDPALLRPGRFDRQIAI-DAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAADRVMMLPAKKSLVLSPRDRRITAYHEAGHALAAHFLEHADGVHKVTIVPRGRALGFMMPRREDMLHWSRKRLLDQIAVALAGRAAEEIVFDDVTTGAENDFRQATELARRMITEWGMHPEFGPVAYAVREDTYLGGYDVRQYSEETAKRIDEAVRRLIEEQYQRVKALLLEKREVLERVAETLLERETLTAEEFQRVVEGLPLEAPE
[Model]
468-666
4eiwB
17%
>target
----------SIYEHEDIKKGIL--LQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKM----NESTRS--VLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLS--RFDLIFLMLDPQDEAYDRRLAHHLV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>4eiwB
LTEAPKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGAR-IPK---GVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVRDLFE-----TAKR---HAPCIVFIDEIDAVGRKNDEREQTLNQLLVEMDGFE---K--------DTAIVVMAATNRPD-------------ILDPALLRPGRFDRQIAI-DAPDVKGREQILRIHARGKPLAEDVDLALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEEAADRVMMLPAKKSLVLSPRDRRITAYHEAGHALAAHFLEHADGVHKVTIVPRGRALGFMMPRREDMLHWSRKRLLDQIAVALAGRAAEEIVFDDVTTGAENDFRQATELARRMITEWGMHPEFGPVAYAVREDTYLGGYDVRQYSEETAKRIDEAVRRLIEEQYQRVKALLLEKREVLERVAETLLERETLTAEEFQRVVEGLPLEAPE
[Model]
1ixz: CRYSTAL STRUCTURE OF THE FTSH ATPASE DOMAIN FROM THERMUS THERMOPHILUS Solved by: X-RAY, Resolution: 2.20A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-761
1ixzA
17%
>target
---------SIYEHEDIKKGIL--LQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGK---GSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIIC-QLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLL--SRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAK-
>1ixzA
TEAPKVTFKDVAGAEEAKEELKEIVEFLKNPSR-FHEMG---ARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVR-----DLFETAK---RHAPCIVFIDEIDAVGRNDER-------EQTLNQLLVEMDGFEKDTAIVVMAATNRPD-------------ILDPALLRPGRFDRQIAI-DAPDVKGREQILRI----HARGKPL----------------------AE---DVDLALLA-------KRTP--G---FVGADLENLLNEAALLAAREGRRKITMKDLEEAAS
[Model]
3eih: CRYSTAL STRUCTURE OF S.CEREVISIAE VPS4 IN THE PRESENCE OF ATPGAMMAS Solved by: X-RAY, Resolution: 3.25A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-658
3eihA
17%
>target
---------------SIYEHEDIKKGILLQLF--GGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQY-TSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNES-----------TRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYD-------------------------------------------------------------------------------------------------------------------------------------
>3eihA
LSSAILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLF-KGNRKPTS---GILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQ-----LFAMARE---NKPSIIFIDQVDALTGTRGEGESEASRRIKTELLVQMNG----VGN------DSQGVLVLGATNIPW-------------QLDSAIRRRFERRIY-IPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSTEDDETRKLTPCSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDFGQEGN
[Model]
468-660
3eihB
17%
>target
--------------SIYEHEDIKKGILLQLFG--GTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQY-TSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNES---------T--RSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRR---------------------------------------------------------------------------------------------------------------------------------
>3eihB
SSAILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLF-KGNRKPTS---GILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQ-----LFAMARE---NKPSIIFIDQVDALTGTRGEGESEASRRIKTELLVQMNG--VGNDS--------QGVLVLGATNIPW-------------QLDSAIRRRFERRIY-IPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSTEDDETRKLTPCSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDFGQE
[Model]
468-663
3eihC
17%
>target
-----------SIYEHEDIKKGILLQLFG--GTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQY-TSGKGSSAVGLTAYVMKDPETRQLVLQTGALV--------LSDNGICCIDEFDKMNESTRS------VLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAH--------------------------------------------------------------------------------------------------------------------------------
>3eihC
ILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLF-KGNRKPTSG---ILLYGPPGTGKSYLAKAVATEANSTFFSVSS--SD---LV---------SKWMGESEKLVKQLFAMARENKPSIIFIDQVDALTGESEASRRIKTELLVQMNG--VGNDS--------QGVLVLGATNIPW-------------QLDSAIRRRFERRIY-IPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSTEDDETRKLTPCSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDFGQEGN
[Model]
3vfd: HUMAN SPASTIN AAA DOMAIN Solved by: X-RAY, Resolution: 3.30A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-656
3vfdA
17%
>target
-------------------SIYEHEDIKKGILLQLF--GGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQY-TSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEA-------------------------------------------------------------------------------------------------
>3vfdA
LANLIMNEIVDNGTAVKFDDIAGQDLAKQALQEIVILPSLRPELFTGL-RAPAR---GLLLFGPPGNGKTMLAKAVAAESNATFFNISA--A---SLGEKLVRA-----LFAVARE---LQPSIIFIDQVDSLLDASRRLKTEFLIE----FD--G----V-QRVLVMGATNRPQ-------------ELDEAVLRRFIKRVYV-SLPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRELKPENMSASEMRNIRLSDFTESLKKIKRSVSPQTLEAYIRWNKDFG
[Model]
1iy2: CRYSTAL STRUCTURE OF THE FTSH ATPASE DOMAIN FROM THERMUS THERMOPHILUS Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-761
1iy2A
17%
>target
---------------SIYEHEDIKKGIL--LQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKG---SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQL-----NARTSVLAAANPIESQWNPKKTTIENIQLPHTLL--SRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAK-
>1iy2A
SRARVLTEAPKVTFKDVAGAEEAKEELKEIVEFLKNPSR-FHEMG---ARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVRD-----LFETAK---RHAPCIVFIDEIDAVGRKNDER------EQTL----NQLLVEMDGFEKDTAIVVMAATNRPD-------------ILDPALLRPGRFDRQIAI-DAPDVKGREQI----LRIHARGKP----------------------LAEDVD----------LALLAKRTP--G---FVGADLENLLNEAALLAAREGRRKITMKDLEEAAS
[Model]
1lv7: CRYSTAL STRUCTURE OF THE AAA DOMAIN OF FTSH Solved by: X-RAY, Resolution: 1.50A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-764
1lv7A
16%
>target
------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYT-SGK--GSSAVGLTAYVMKDPETRQLVLQTGALVLSD-NGICCIDEFDKMNES---TRSVLHEVMEQQTLSIAKAGII-CQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLS--RFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLH----
>1lv7A
MLTEDQIKTTFADVAGCDEAKEEVA-ELVEYL-R---EP--SRFKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVR---------DMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDERE-QTLNQMLVEMDGFEGNEGIIVIAATNRPD-------------VLDPALLRPGRFDRQVV-VGLPDVRGREQILKVHMRR----V----------------------PLAP---DIDAAIIAR-------GTP--G---FSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGL
[Model]
2c9o: 3D STRUCTURE OF THE HUMAN RUVB-LIKE HELICASE RUVBL1 Solved by: X-RAY, Resolution: 2.20A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
567-767
2c9oA
16%
>target
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHREA---------
>2c9oA
TTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTLHDLDVANGEINKVVNKYIDQGIAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIV---IFASNRGNCVIRGTED-----------ITSPHGIPLDLLDRV-MIIRTML-----------------------------YTPQEMKQIIKIRAQTEGINISEEALNHLGEIGT------K------TTLRYSVQLLTPANLLAKINGKDSIEKEHVEEISELFYDAKSSAKILAD
[Model]
468-766
2c9oC
14%
>target
-------------------------------SIYEHEDIKKGIL--LQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLV-PRGQYTSGKGSSA----VGLTA----YV----------------MK-------------DPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHRE----------
>2c9oC
KSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIK-------SK----KMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKKKEIIQDVTLHDLDVAGEINKVVNKYIDQG--IAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPI--------------VIFASNRGNCVIRGTEDITSPHGIPLDLLDRVM-IIRTM-LYTPQ----------------------------EMKQIIKIRAQTEGINISEEALNHLGEIG-------TK-----TTLRYSVQLLTPANLLAKINGKDSIEKEHVEEISELFYDAKSSAKILAD
[Model]
553-765
2c9oB
16%
>target
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHR----------
>2c9oB
TTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCSHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTLHDLDINKVVNKYIDQGIAEL--VPGVLFVDEVHMLDIECFTYLHRALESSIAPIV---IFASNRGNCVIRGTEDI-----------TSPHGIPLDLLDRV-MIIRTML-----------------------------YTPQEMKQIIKIRAQTEGINISEEALNHLGEIGT------K------TTLRYSVQLLTPANLLAKINGKDSIEKEHVEEISELFYDAKSSAKILA
[Model]
2r62: CRYSTAL STRUCTURE OF HELICOBACTER PYLORI ATP DEPENDENT PROTEASE, FTSH Solved by: X-RAY, Resolution: 3.30A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-762
2r62A
16%
>target
-----------SIYEHEDIKKGILLQL--FGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQ-TGALVLS-DNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLL--SRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEA-SQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKR-------
>2r62A
INAEKPNVRFKDMAGNEEAKEEVVEIVDFLKYPER-YANLG---AKIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSM-GGSSFIEMF--V-GLG---ASRVRDLFETAKKQAPSIIFIDEIDAIGKNDER--EQTLNQLLAEMD--G-FGSENAPVIVLAATNRPE-------------ILDPALMRPGRFDRQVLV-DKPDFNGRVEILKVHIK---------------------------G-VK--LANDVNLQEVAK-------LT--AG---LAGADLANIINEAALLAGRNNQKEVRQQHLKEAVERGIAGLE
[Model]
468-762
2r62B
16%
>target
-----------SIYEHEDIKKGILLQL--FGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQ-TGALVLS-DNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLL--SRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEA-SQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKR-------
>2r62B
INAEKPNVRFKDMAGNEEAKEEVVEIVDFLKYPER-YANLG---AKIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSM-GGSSFIEMF--V-GLG---ASRVRDLFETAKKQAPSIIFIDEIDAIGKNDER--EQTLNQLLAEMD--G-FGSENAPVIVLAATNRPE-------------ILDPALMRPGRFDRQVLV-DKPDFNGRVEILKVHIK---------------------------G-VK--LANDVNLQEVAK-------LT--AG---LAGADLANIINEAALLAGRNNQKEVRQQHLKEAVERGIAGLE
[Model]
2qz4: HUMAN PARAPLEGIN, AAA DOMAIN IN COMPLEX WITH ADP Solved by: X-RAY, Resolution: 2.22A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-664
2qz4A
16%
>target
------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLL--SRFDLIFLMLDPQDEAYDRRLAHH------------------------------------------------------------
>2qz4A
MGVSFKDVAGMHEAKLEVREFVD-Y-LK---SPE---AKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGAEFVEVIGGLGAARVRS-----LFKEARA---RAPCIVYIDEIEQTLNQLL----VEMD---------GMG--TTDHVIVLASTNRAD-------------ILDGALMRPGRLDRHVFI-DLPTLQERREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAALHVHTLNFEYAVERVLAGTAKK
[Model]
1xwi: CRYSTAL STRUCTURE OF VPS4B Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-663
1xwiA
16%
>target
------------SIYEHEDIKKGILLQLFGGT--RKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGAL-------V-LSDNGICCIDEFDKMNES-----------TRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAH-------------------------------------------------------------------------------------------------------------------------------------
>1xwiA
AIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFT-GKRTPWRG---ILLFGPPGTGKSYLAKAVATEANNSTFFSISSSDL------------VSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSENESEAARRIKTEFLVQMQ---------GV-GVDNDGILVLGATNIP-------------WVLDSAIRRRFEKRIY-IPLPEPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPVRKVQSATHFKKVRGPSRADPNHLVDDLLTPCSPGDPGAIEMTWMDVPGDKLLEPVVSMSDMLRSLSNTKPTVNEHDLLKLKKFTEDFGQEG
[Model]
3u5z: STRUCTURE OF T4 BACTERIOPHAGE CLAMP LOADER BOUND TO THE T4PRIMER-TEMPLATE DNA, AND ATP ANALOG Solved by: X-RAY, Resolution: 3.50A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-665
3u5zD
14%
>target
----------------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGD-PGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGA-L--VLSDNGICCIDEFDKMN-ESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHL---------------------------------------------------------------------------------------------------------------------------------------------------
>3u5zD
SMITVNEKEHILEQKYRPSTIDECILPAFDKETFKSIT-SK-------G-K-----IPHIILHSPSPGTGKTTVAKALCHDVNADMMFV-NGS-DCKI--DFVRG-----P-LTNFASAASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAY-------------SSNCSIIITANNID-------------GIIKPLQSRCRVIT--FGQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK
[Model]
468-665
3u5zC
14%
>target
----------------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGD-PGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGA-L--VLSDNGICCIDEFDKMN-ESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHL---------------------------------------------------------------------------------------------------------------------------------------------------
>3u5zC
SMITVNEKEHILEQKYRPSTIDECILPAFDKETFKSIT-SK-------G-K-----IPHIILHSPSPGTGKTTVAKALCHDVNADMMFV-NGS-DCKI--DFVRG-----P-LTNFASAASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAY-------------SSNCSIIITANNID-------------GIIKPLQSRCRVIT--FGQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK
[Model]
468-665
3u5zB
14%
>target
----------------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGD-PGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGA-L--VLSDNGICCIDEFDKMN-ESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHL---------------------------------------------------------------------------------------------------------------------------------------------------
>3u5zB
SMITVNEKEHILEQKYRPSTIDECILPAFDKETFKSIT-SK-------G-K-----IPHIILHSPSPGTGKTTVAKALCHDVNADMMFV-NGS-DCKI--DFVRG-----P-LTNFASAASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAY-------------SSNCSIIITANNID-------------GIIKPLQSRCRVIT--FGQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK
[Model]
468-656
3u5zE
16%
>target
--------------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGD-PGTSKSQLLQYVYNLVPRGQ-YTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMN-ESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEA----------------------------------------------------------------------------------------------------------------------------------------------
>3u5zE
ITVNEKEHILEQKYRPSTIDECILPAFDKETFKSIT-S-------KG---KI---PHIILHSPSPGTGKTTVAKALCHDVNADMMFVNGSDC-KID----FVRGPL-TNFASA--ASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAYS-------------SNCSIIITANNID-------------GIIKPLQSRCR-VITFGQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK
[Model]
468-665
3u5zL
14%
>target
----------------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGD-PGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGA-L--VLSDNGICCIDEFDKMN-ESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHL---------------------------------------------------------------------------------------------------------------------------------------------------
>3u5zL
SMITVNEKEHILEQKYRPSTIDECILPAFDKETFKSIT-SK-------G-K-----IPHIILHSPSPGTGKTTVAKALCHDVNADMMFV-NGS-DCKI--DFVRG-----P-LTNFASAASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAY-------------SSNCSIIITANNID-------------GIIKPLQSRCRVIT--FGQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK
[Model]
468-665
3u5zN
14%
>target
----------------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGD-PGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGA-L--VLSDNGICCIDEFDKMN-ESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHL---------------------------------------------------------------------------------------------------------------------------------------------------
>3u5zN
SMITVNEKEHILEQKYRPSTIDECILPAFDKETFKSIT-SK-------G-K-----IPHIILHSPSPGTGKTTVAKALCHDVNADMMFV-NGS-DCKI--DFVRG-----P-LTNFASAASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAY-------------SSNCSIIITANNID-------------GIIKPLQSRCRVIT--FGQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK
[Model]
468-665
3u5zM
14%
>target
----------------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGD-PGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGA-L--VLSDNGICCIDEFDKMN-ESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHL---------------------------------------------------------------------------------------------------------------------------------------------------
>3u5zM
SMITVNEKEHILEQKYRPSTIDECILPAFDKETFKSIT-SK-------G-K-----IPHIILHSPSPGTGKTTVAKALCHDVNADMMFV-NGS-DCKI--DFVRG-----P-LTNFASAASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAY-------------SSNCSIIITANNID-------------GIIKPLQSRCRVIT--FGQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK
[Model]
468-656
3u5zO
16%
>target
--------------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGD-PGTSKSQLLQYVYNLVPRGQ-YTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMN-ESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEA----------------------------------------------------------------------------------------------------------------------------------------------
>3u5zO
ITVNEKEHILEQKYRPSTIDECILPAFDKETFKSIT-S-------KG---KI---PHIILHSPSPGTGKTTVAKALCHDVNADMMFVNGSDC-KID----FVRGPL-TNFASA--ASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAYS-------------SNCSIIITANNID-------------GIIKPLQSRCR-VITFGQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK
[Model]
3u60: STRUCTURE OF T4 BACTERIOPHAGE CLAMP LOADER BOUND TO OPEN CAND ATP ANALOG Solved by: X-RAY, Resolution: 3.50A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-665
3u60B
14%
>target
---------------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGD-PGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMN-ESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHL---------------------------------------------------------------------------------------------------------------------------------------------------
>3u60B
MITVNEKEHILEQKYRPSTIDECILPAFDKETFK-SITSK-------G-K-----IPHIILHSPSPGTGKTTVAKALCHDVNADMMFV-NGS-DCKI--DFVRGPL-TNFASA--ASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAY-------------SSNCSIIITANNID-------------GIIKPLQSRCRVI-TF-GQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK
[Model]
468-665
3u60D
14%
>target
---------------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGD-PGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMN-ESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHL---------------------------------------------------------------------------------------------------------------------------------------------------
>3u60D
MITVNEKEHILEQKYRPSTIDECILPAFDKETFK-SITSK-------G-K-----IPHIILHSPSPGTGKTTVAKALCHDVNADMMFV-NGS-DCKI--DFVRGPL-TNFASA--ASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAY-------------SSNCSIIITANNID-------------GIIKPLQSRCRVI-TF-GQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK
[Model]
468-665
3u60C
14%
>target
----------------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGD-PGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGA-L--VLSDNGICCIDEFDKMN-ESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHL---------------------------------------------------------------------------------------------------------------------------------------------------
>3u60C
SMITVNEKEHILEQKYRPSTIDECILPAFDKETFKSIT-SK-------G-K-----IPHIILHSPSPGTGKTTVAKALCHDVNADMMFV-NGS-DCKI--DFVRG-----P-LTNFASAASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAY-------------SSNCSIIITANNID-------------GIIKPLQSRCRVIT--FGQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK
[Model]
468-656
3u60E
16%
>target
--------------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGD-PGTSKSQLLQYVYNLVPRGQ-YTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMN-ESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEA----------------------------------------------------------------------------------------------------------------------------------------------
>3u60E
ITVNEKEHILEQKYRPSTIDECILPAFDKETFKSIT-S-------KG---KI---PHIILHSPSPGTGKTTVAKALCHDVNADMMFVNGSDC-KID----FVRGPL-TNFASA--ASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAYS-------------SNCSIIITANNID-------------GIIKPLQSRCR-VITFGQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK
[Model]
3dzd: CRYSTAL STRUCTURE OF SIGMA54 ACTIVATOR NTRC4 IN THE INACTIVE STATE Solved by: X-RAY, Resolution: 2.40A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
500-745
3dzdB
16%
>target
-----------------------------------------------------------------------------------------------------------------------------------------------------RAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKGSSAVGLTAYV--------MKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEA-YDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIA-YAHST--IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAK------
>3dzdB
KRVLVVDDEESITSSLSAILEEEGYHPDTAKTLREAEKKIKELFFPVIVLDVWMPDGDGVNFIDFIKENSPDSVVIVITGHGSVDTAVKAIKKGAYEFLEKPFSVERFLLTIKHAFEEYSKKAPPQEEIEFVGEHPKILEIKRLIPKIAKSKAPVLITGESGTGKEIVARLIHRYSGRKGAFVDL---NCASIPQELAESELFGHEKGAFTGALTRKKGKLELADQGTLFLDEVGELDQRVQAKLLRVLETGSFTR--LGGNQKIEVDIRVISATNKN-----LE-EEIKKGNFREDLYYRLSVFQIYLPPLRERGKD--V---------------------ILLAEYFLKKFAKEYKKNCFELSEETKEYLMKQ------------EWKGNVRELKNLIERAVILCEGEVIKP
[Model]
500-745
3dzdA
16%
>target
-----------------------------------------------------------------------------------------------------------------------------------------------------RAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKGSSAVGLTAYV--------MKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEA-YDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIA-YAHST--IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAK------
>3dzdA
KRVLVVDDEESITSSLSAILEEEGYHPDTAKTLREAEKKIKELFFPVIVLDVWMPDGDGVNFIDFIKENSPDSVVIVITGHGSVDTAVKAIKKGAYEFLEKPFSVERFLLTIKHAFEEYSKKAPPQEEIEFVGEHPKILEIKRLIPKIAKSKAPVLITGESGTGKEIVARLIHRYSGRKGAFVDL---NCASIPQELAESELFGHEKGAFTGALTRKKGKLELADQGTLFLDEVGELDQRVQAKLLRVLETGSFTR--LGGNQKIEVDIRVISATNKN-----LE-EEIKKGNFREDLYYRLSVFQIYLPPLRERGKD--V---------------------ILLAEYFLKKFAKEYKKNCFELSEETKEYLMKQ------------EWKGNVRELKNLIERAVILCEGEVIKP
[Model]
3uk6: CRYSTAL STRUCTURE OF THE TIP48 (TIP49B) HEXAMER Solved by: X-RAY, Resolution: 2.95A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
467-765
3uk6A
13%
>target
--------------------PSIYEHEDIKKGI--LLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ---YTSGK--GSSAVGLTAYV------------MK-----DPETRQLVLQ-------------TGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHR----------
>3uk6A
AHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIRE-------G---K-IAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRITVSLHEIDVINSFLALFKSEVREQINAKVAEWREEGKIPGVLFIDEVHMLDIESFSFLNRALESDMAP--------------VLIMATNRGITRIR-GTSYQSPHGIPIDLLDRLLIVS--TTPYSEKDTKQIL------------------------RIRC---E-EEDVEMSEDAYTVLTRIG-------LE-----TSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMK
[Model]
468-767
3uk6C
12%
>target
-----------------------------------SIYEHEDIKKGI--LLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKGSS----AVGLT--------------AYVMKD--------PE-------------------TRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAY-AHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHREA--------
>3uk6C
TKVPEDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIRE-------G---K-IAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRITVSLHEIDVINSRTQGFLALFEIKSEVREQINAKVAEW--REEGKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPV---LIMATNRGITRIRGTSY------------QSPHGIPIDLLDRLLIVST--TPYSE----------------------------KDTKQILRIRCEE-EDVEMSEDAYTVLTRIGL-------E-----TSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMK
[Model]
468-766
3uk6D
13%
>target
--------------------SIYEHEDIKKGIL--LQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKGSS--AV--GLTA-------------YVMKDP------ETRQL--------------VLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHRE--------
>3uk6D
GAHSHIRGLDDALEPRQASQGMVGQLAARRAAGVVLEMIR-------EG---KI-AGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIVSLHEIDVINSRTQGFFSGDTGEIKSEVREQINAKVAEWIIPGVLFIDEVHMLDIESFSFLNRALESDMAP--------------VLIMATNRGITRIRGTS-YQSPHGIPIDLLDRL-LIVS-TTPYSEKDTKQILRI---------------------------RCEE-EDVEMSEDAYTVLTRIG-------LE-----TSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYM
[Model]
467-765
3uk6I
12%
>target
-----------------PSIYEHEDIKKGIL--LQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPR-GQYTSGKGSSAV----GLTA-----------------------YVMKDPETRQ----------LVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHR-----------
>3uk6I
GAHSHIRGLALEPRQASQGMVGQLAARRAAGVVLEMIRE-------G---K-IAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSISLHEIDVINSRTQGFLALFSGGEIKSEVREQINAKVAEWREEGIIPGVLFIDEVHMLDIESFSFLNRALESDMAPV--------------LIMATNRGITRIRG-TSYQSPHGIPIDLLDRLLIVST--TPYSEKDTKQILRIR---------------------------CEE-EDVEMSEDAYTVLTRIGL------------ETSLRYAIQLITAASLV-----GTEVQVDDIKRVYSLFLDESRSTQYMKE
[Model]
469-767
3uk6B
13%
>target
-----------------------IYEHEDIKKGILL--QLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKGSSA----VGLTAY--------V-MKDPETRQLVLQ-------TGAL---------------------VLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHREA--------
>3uk6B
GAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIR-------EG---K-IAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIV-HTVSLHEIDVINSRFLALFSGDTGEIKSEVREQINAKVAEWIIPGVLFIDEVHMLDIESFSFLNRALESD--------------MAPVLIMATNRGITRIRG-TSYQSPHGIPIDLLDRLL-IV-STTPYSEKD----------------------------TKQILRIRCEEEDVEMSEDAYTVLTRI-------GL-E----TSLRYAIQLITAASLVC-----REVQVDDIKRVYSLFLDESRSTQYMK
[Model]
468-762
3uk6J
12%
>target
----------------------------------SIYEHEDIKKGI--LLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKGSS----AVGL--------------TAYVMKD------------PETRQLV-------LQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKR-
>3uk6J
TKVPEVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIRE-------G---KI-AGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRITVSLHEIDVINSRTFLALFTGEIKSEVREQINAKVAEWRIIPGVLFIDEVHMLDIESFSFLNRALESDMA--------------PVLIMATNRGITRIRGT-SYQSPHGIPIDLLDRLLIVS--TTPYSEKDTKQ----ILRIR-----------------------CEE-E--DMSEDAYTVLTRIG-------L-----ETSLRYAIQLITAASLVCRKRKRVYSLFLDESRSTQY
[Model]
467-767
3uk6H
12%
>target
--------------PSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGK----GSSAVGLTA--------------YVMKDPETRQLV------LQ--TGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHREA--------
>3uk6H
IGAHSHIREPRQASQGMVGQLAARRAAGVVLEMI-------------R---AVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVTVSLHEIDVINSFSEIKSEVREQINAKVAEWIPGVLFIDEVHMLDIESFSFLNRALESDMAPV--------------LIMATNRGITRIRGT-SYQSPHGIPIDLLDRLLIVSTT--PYSEKDTKQILRIRCE---------------------------E-EDVEMSEDAYTVLTRI-------GL-----ETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMK
[Model]
468-767
3uk6G
12%
>target
--------------------------------------SIYEHEDIKKGILLQL--FGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKGS----SAVGLT-------------------------AYVMK--------DPETRQL--------------VLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHREA--------
>3uk6G
TTKVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIRE-------G---KI-AGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIKATVSLHEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEG--AEIIPGVLFIDEVHMLDIESFSFLNRALESDMAP--------------VLIMATNRGITRIRGT-SYQSPHGIPIDLLDRLLIVS--TTPYSEKDTKQILRIRC---------------------------E-EEDVEMSEDAYTVLTRI-------GLE-----TSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMK
[Model]
469-767
3uk6E
13%
>target
-----------------------IYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKGSSA----VGLT----AYVMKDP-E-TR---------------QLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHREA--------
>3uk6E
GAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVL-EMIR----EG---KI-AGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGTVSLHEIDVINSRTEIEVREQINAKVAEWREIPGVLFIDEVHMLDIESFSFLNRALESDMAPV--------------LIMATNRGITRIRG-TSYQSPHGIPIDLLDRLLIVS--TTPYSEKDTKQILRIRCEE----------------------------EDVEMSEDAYTVLTRIG-------LE-----TSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMK
[Model]
468-765
3uk6F
12%
>target
----------------------SIYEHEDIKKGI--LLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKGSS----AVG--------------LTAYVMKDP--------ETR---QLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHR-------------------
>3uk6F
GAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIR----E---G---KI-AGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIVHTVSLHEIDVINEIKSEVREQINAKVAEWRIIPGVLFIDEVHMLDIESFSFLNRALESD--------------MAPVLIMATNRGITRIRGTS-YQSPHGIPIDLLDRLLIVS--TTPYSEKDTKQILRIRC--------------------------EEE--DVEMSEDAYTVLTRI-------GL-----ETSLRYAIQLITAASLVCR--KRKEVQVDDIKRVYSLFLDESRSTQYMKEYQDAFLFN
[Model]
468-767
3uk6K
13%
>target
----------------------SIYEHEDIKKGI--LLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLV-PRGQYTSGKGSS---------A--------VGLTAYV---------MKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHREA--------
>3uk6K
GAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIR-------EG---K--AGRAVLIAG-Q-TGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQFRRSIGVRIKVSLHEIDVINSREIV-REQINAKVAEWREEPGVLFIDEVHMLDIESFSFLNRALESDMAPV--------------LIMATNRGITRIR-GTSYQSPHGIPIDLLDRL-LIVSTTP-----------------------------YSEKDTKQILRIRCEEEDVEMSEDAYTVLTRI-------GL-E----TSLRYAIQLITAASLVCR----KRKQVDDIKRVYSLFLDESRSTQYMK
[Model]
504-592
3uk6L
16%
>target
---------------------NILLCGDPGTSKSQLLQYVYNLV----PRGQYTSGKGS----------SAVGLTAYVMKDPETRQLVLQ---TGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQ---------------------------------------------------------------------------------------------------------
>3uk6L
DDALEAARRAAGVVLEMIRGRAVLIAGQPGTGKTAIAMGMAQALTAIAGSEIFEMSKTEALTQAFRRRISLHEIDVINSRTEIKSEVREQINAKVAEWREIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEMSTRIGLETSLRYAIQLSLVEVQVDDIKRVYSLFLDESRSTQYMK
[Model]
1iy0: CRYSTAL STRUCTURE OF THE FTSH ATPASE DOMAIN WITH AMP-PNP FROM THERMUS THERMOPHILUS Solved by: X-RAY, Resolution: 2.95A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-761
1iy0A
16%
>target
---------SIYEHEDIKKGIL--LQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKG---SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLL--SRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAK-
>1iy0A
TEAPKVTFKDVAGAEEAKEELKEIVEFLKNPSR-FHEMG---ARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVR-----DLFETAK---RHAPCIVFIDEIDAVGRKRNDEREQTLNQLLVEMDG----FEKDTAIVVMAATNRPD-------------ILDPALLRPGRFDRQIAI-DAPDVKGREQILRIHAR----GKP----------------------LAEDVD---LALLA------K-RTP--G---FVGADLENLLNEAALLAAREGRRKITMKDLEEAAS
[Model]
2r65: CRYSTAL STRUCTURE OF HELICOBACTER PYLORI ATP DEPENDENT PROTEASE, FTSH ADP COMPLEX Solved by: X-RAY, Resolution: 3.30A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-764
2r65A
16%
>target
-----------SIYEHEDIKKGIL--LQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPET--RQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLL--SRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLH------
>2r65A
INAEKPNVRFKDMAGNEEAKEEVVEIVDFLKYPER-YANL---GAKIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSM-GGSSFIEMFV---GLGASRVRDLFETAKKQ---APSIIFIDEIDAIGKNDER--EQTLNQLLAEMD--G-FGSENAPVIVLAATNRPE-------------ILDPALMRPGRFDRQVLV-DKPDFNGRVEILK----VHI-----------------------KG-VK--LANDVN------LQEVAKLTAG-----LAGADLANIINEAALLAGRNNQKEVRQQHLKEAVERGIAGLEK
[Model]
468-764
2r65B
16%
>target
-----------SIYEHEDIKKGIL--LQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPET--RQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLL--SRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLH------
>2r65B
INAEKPNVRFKDMAGNEEAKEEVVEIVDFLKYPER-YANL---GAKIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSM-GGSSFIEMFV---GLGASRVRDLFETAKKQ---APSIIFIDEIDAIGKNDER--EQTLNQLLAEMD--G-FGSENAPVIVLAATNRPE-------------ILDPALMRPGRFDRQVLV-DKPDFNGRVEILK----VHI-----------------------KG-VK--LANDVN------LQEVAKLTAG-----LAGADLANIINEAALLAGRNNQKEVRQQHLKEAVERGIAGLEK
[Model]
468-764
2r65C
16%
>target
-----------SIYEHEDIKKGIL--LQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPET--RQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLL--SRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLH------
>2r65C
INAEKPNVRFKDMAGNEEAKEEVVEIVDFLKYPER-YANL---GAKIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSM-GGSSFIEMFV---GLGASRVRDLFETAKKQ---APSIIFIDEIDAIGKNDER--EQTLNQLLAEMD--G-FGSENAPVIVLAATNRPE-------------ILDPALMRPGRFDRQVLV-DKPDFNGRVEILK----VHI-----------------------KG-VK--LANDVN------LQEVAKLTAG-----LAGADLANIINEAALLAGRNNQKEVRQQHLKEAVERGIAGLEK
[Model]
468-764
2r65D
16%
>target
-----------SIYEHEDIKKGIL--LQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPET--RQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLL--SRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLH------
>2r65D
INAEKPNVRFKDMAGNEEAKEEVVEIVDFLKYPER-YANL---GAKIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSM-GGSSFIEMFV---GLGASRVRDLFETAKKQ---APSIIFIDEIDAIGKNDER--EQTLNQLLAEMD--G-FGSENAPVIVLAATNRPE-------------ILDPALMRPGRFDRQVLV-DKPDFNGRVEILK----VHI-----------------------KG-VK--LANDVN------LQEVAKLTAG-----LAGADLANIINEAALLAGRNNQKEVRQQHLKEAVERGIAGLEK
[Model]
468-764
2r65E
16%
>target
-----------SIYEHEDIKKGIL--LQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPET--RQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLL--SRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLH------
>2r65E
INAEKPNVRFKDMAGNEEAKEEVVEIVDFLKYPER-YANL---GAKIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSM-GGSSFIEMFV---GLGASRVRDLFETAKKQ---APSIIFIDEIDAIGKNDER--EQTLNQLLAEMD--G-FGSENAPVIVLAATNRPE-------------ILDPALMRPGRFDRQVLV-DKPDFNGRVEILK----VHI-----------------------KG-VK--LANDVN------LQEVAKLTAG-----LAGADLANIINEAALLAGRNNQKEVRQQHLKEAVERGIAGLEK
[Model]
1ofh: ASYMMETRIC COMPLEX BETWEEN HSLV AND I-DOMAIN DELETED HSLU (H. INFLUENZAE) Solved by: X-RAY, Resolution: 2.50A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-737
1ofhA
16%
>target
--------------SIYEHEDIKKGILLQLFG---GTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTA--YVMKDPET--RQLVLQTGAL--VLSDNGICCIDEFDKMNEST------------RSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIA-YAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLI--------------------------------------------
>1ofhA
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQL--QEPLR-HEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKV-E---ATKFTEVGYVGKEVDSIIRDLTDSAGGAIDAVEQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVSTKHGMVK---TDHILFIASGAFQVAR---------PSDLIPELQGRLPIRVE-LTALSAADFERILTEPHA----------------SLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEK-----TENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
468-737
1ofhC
16%
>target
--------------SIYEHEDIKKGILLQLFG---GTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTA--YVMKDPET--RQLVLQTGAL--VLSDNGICCIDEFDKMNEST------------RSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIA-YAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLI--------------------------------------------
>1ofhC
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQL--QEPLR-HEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKV-E---ATKFTEVGYVGKEVDSIIRDLTDSAGGAIDAVEQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVSTKHGMVK---TDHILFIASGAFQVAR---------PSDLIPELQGRLPIRVE-LTALSAADFERILTEPHA----------------SLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEK-----TENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
468-737
1ofhB
16%
>target
--------------SIYEHEDIKKGILLQLFG---GTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTA--YVMKDPET--RQLVLQTGAL--VLSDNGICCIDEFDKMNEST------------RSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIA-YAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLI--------------------------------------------
>1ofhB
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQL--QEPLR-HEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKV-E---ATKFTEVGYVGKEVDSIIRDLTDSAGGAIDAVEQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVSTKHGMVK---TDHILFIASGAFQVAR---------PSDLIPELQGRLPIRVE-LTALSAADFERILTEPHA----------------SLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEK-----TENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
3m6a: CRYSTAL STRUCTURE OF BACILLUS SUBTILIS LON C-TERMINAL DOMA Solved by: X-RAY, Resolution: 3.40A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
463-762
3m6aC
16%
>target
----------------------------------------------------------------------SALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQ---TLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAH-HLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNK-----VEAIDVEEAKR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3m6aC
TGEVQTLTEKIEEAGMPDHVKETALKELNRYEKIPSSSAESSVIRNYIDWLVALPWTDETDDKLDLKEAGRLLDEEHHGLEKVKERILEYLAV--QKLT-----KSLKGP-ILCLAGPPGVGKTSLAKSIAKSLGRKFVRISL----------------GGR-IIQGMKKAGKLNPVFLLDEIDKMS-----AMLEVLDPEQNSSFSDHYIEETFDL-SKVLFIATANNLA-------------TIPGPLRDRMEIIN--IAGYTEIEKLEIVKDHLLPK----------------QIKE---HGLKKSNLQLRDQAILDIIRYYT--REA-----GVRSLERQLAAICR---KAAKAIVAEERKRITVTEKNLQDFIGKRIFRYGQAETEDQVGVVTGLAYTTVGGDTLSIEVSLSPGKGKLILTGKLGDVMRESAQAAFSYVRSKTEELGIEPDFHEKYDIHIHVPEGAVPKDGPAAGITMATALVSALTGRAVSREVGMTGEITLRGRVLPIGGLKEKALGAHRAGLTTIIAPKDNEKDIEDIPESVREGLTFILASHLDEVLEHALV
[Model]
463-762
3m6aF
16%
>target
----------------------------------------------------------------------SALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQ---TLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAH-HLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNK-----VEAIDVEEAKR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3m6aF
TGEVQTLTEKIEEAGMPDHVKETALKELNRYEKIPSSSAESSVIRNYIDWLVALPWTDETDDKLDLKEAGRLLDEEHHGLEKVKERILEYLAV--QKLT-----KSLKGP-ILCLAGPPGVGKTSLAKSIAKSLGRKFVRISL----------------GGR-IIQGMKKAGKLNPVFLLDEIDKMS-----AMLEVLDPEQNSSFSDHYIEETFDL-SKVLFIATANNLA-------------TIPGPLRDRMEIIN--IAGYTEIEKLEIVKDHLLPK----------------QIKE---HGLKKSNLQLRDQAILDIIRYYT--REA-----GVRSLERQLAAICR---KAAKAIVAEERKRITVTEKNLQDFIGKRIFRYGQAETEDQVGVVTGLAYTTVGGDTLSIEVSLSPGKGKLILTGKLGDVMRESAQAAFSYVRSKTEELGIEPDFHEKYDIHIHVPEGAVPKDGPAAGITMATALVSALTGRAVSREVGMTGEITLRGRVLPIGGLKEKALGAHRAGLTTIIAPKDNEKDIEDIPESVREGLTFILASHLDEVLEHALV
[Model]
463-762
3m6aB
16%
>target
----------------------------------------------------------------------SALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQ---TLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAH-HLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNK-----VEAIDVEEAKR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3m6aB
TGEVQTLTEKIEEAGMPDHVKETALKELNRYEKIPSSSAESSVIRNYIDWLVALPWTDETDDKLDLKEAGRLLDEEHHGLEKVKERILEYLAV--QKLT-----KSLKGP-ILCLAGPPGVGKTSLAKSIAKSLGRKFVRISL----------------GGR-IIQGMKKAGKLNPVFLLDEIDKMS-----AMLEVLDPEQNSSFSDHYIEETFDL-SKVLFIATANNLA-------------TIPGPLRDRMEIIN--IAGYTEIEKLEIVKDHLLPK----------------QIKE---HGLKKSNLQLRDQAILDIIRYYT--REA-----GVRSLERQLAAICR---KAAKAIVAEERKRITVTEKNLQDFIGKRIFRYGQAETEDQVGVVTGLAYTTVGGDTLSIEVSLSPGKGKLILTGKLGDVMRESAQAAFSYVRSKTEELGIEPDFHEKYDIHIHVPEGAVPKDGPAAGITMATALVSALTGRAVSREVGMTGEITLRGRVLPIGGLKEKALGAHRAGLTTIIAPKDNEKDIEDIPESVREGLTFILASHLDEVLEHALV
[Model]
463-762
3m6aE
16%
>target
----------------------------------------------------------------------SALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQ---TLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAH-HLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNK-----VEAIDVEEAKR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3m6aE
TGEVQTLTEKIEEAGMPDHVKETALKELNRYEKIPSSSAESSVIRNYIDWLVALPWTDETDDKLDLKEAGRLLDEEHHGLEKVKERILEYLAV--QKLT-----KSLKGP-ILCLAGPPGVGKTSLAKSIAKSLGRKFVRISL----------------GGR-IIQGMKKAGKLNPVFLLDEIDKMS-----AMLEVLDPEQNSSFSDHYIEETFDL-SKVLFIATANNLA-------------TIPGPLRDRMEIIN--IAGYTEIEKLEIVKDHLLPK----------------QIKE---HGLKKSNLQLRDQAILDIIRYYT--REA-----GVRSLERQLAAICR---KAAKAIVAEERKRITVTEKNLQDFIGKRIFRYGQAETEDQVGVVTGLAYTTVGGDTLSIEVSLSPGKGKLILTGKLGDVMRESAQAAFSYVRSKTEELGIEPDFHEKYDIHIHVPEGAVPKDGPAAGITMATALVSALTGRAVSREVGMTGEITLRGRVLPIGGLKEKALGAHRAGLTTIIAPKDNEKDIEDIPESVREGLTFILASHLDEVLEHALV
[Model]
463-762
3m6aA
16%
>target
----------------------------------------------------------------------SALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQ---TLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAH-HLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNK-----VEAIDVEEAKR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3m6aA
TGEVQTLTEKIEEAGMPDHVKETALKELNRYEKIPSSSAESSVIRNYIDWLVALPWTDETDDKLDLKEAGRLLDEEHHGLEKVKERILEYLAV--QKLT-----KSLKGP-ILCLAGPPGVGKTSLAKSIAKSLGRKFVRISL----------------GGR-IIQGMKKAGKLNPVFLLDEIDKMS-----AMLEVLDPEQNSSFSDHYIEETFDL-SKVLFIATANNLA-------------TIPGPLRDRMEIIN--IAGYTEIEKLEIVKDHLLPK----------------QIKE---HGLKKSNLQLRDQAILDIIRYYT--REA-----GVRSLERQLAAICR---KAAKAIVAEERKRITVTEKNLQDFIGKRIFRYGQAETEDQVGVVTGLAYTTVGGDTLSIEVSLSPGKGKLILTGKLGDVMRESAQAAFSYVRSKTEELGIEPDFHEKYDIHIHVPEGAVPKDGPAAGITMATALVSALTGRAVSREVGMTGEITLRGRVLPIGGLKEKALGAHRAGLTTIIAPKDNEKDIEDIPESVREGLTFILASHLDEVLEHALV
[Model]
463-762
3m6aD
16%
>target
----------------------------------------------------------------------SALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQ---TLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAH-HLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNK-----VEAIDVEEAKR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3m6aD
TGEVQTLTEKIEEAGMPDHVKETALKELNRYEKIPSSSAESSVIRNYIDWLVALPWTDETDDKLDLKEAGRLLDEEHHGLEKVKERILEYLAV--QKLT-----KSLKGP-ILCLAGPPGVGKTSLAKSIAKSLGRKFVRISL----------------GGR-IIQGMKKAGKLNPVFLLDEIDKMS-----AMLEVLDPEQNSSFSDHYIEETFDL-SKVLFIATANNLA-------------TIPGPLRDRMEIIN--IAGYTEIEKLEIVKDHLLPK----------------QIKE---HGLKKSNLQLRDQAILDIIRYYT--REA-----GVRSLERQLAAICR---KAAKAIVAEERKRITVTEKNLQDFIGKRIFRYGQAETEDQVGVVTGLAYTTVGGDTLSIEVSLSPGKGKLILTGKLGDVMRESAQAAFSYVRSKTEELGIEPDFHEKYDIHIHVPEGAVPKDGPAAGITMATALVSALTGRAVSREVGMTGEITLRGRVLPIGGLKEKALGAHRAGLTTIIAPKDNEKDIEDIPESVREGLTFILASHLDEVLEHALV
[Model]
3d8b: CRYSTAL STRUCTURE OF HUMAN FIDGETIN-LIKE PROTEIN 1 IN COMPLEX WITH ADP Solved by: X-RAY, Resolution: 2.00A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-666
3d8bB
16%
>target
-----------------------SIYEHEDIKKGILLQLFGG--TRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPET--RQLVLQTGALVLSDNGICCIDEFDKMNES--TRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLV-----------------------------------------------------------------------------------------
>3d8bB
LEPKMIELIMNEIMDHGPPVNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLR-GPPK---GILLFGPPGTGKTLIGKCIASQSGATFFS-ISASS---LT-----EGEKMVRALFAVARC---QQPAVIFIDEIDSLLSSRRIKTEFLVQLDG-------------AEDRILVVGATNRPQ-------------EIDEAARRRLVKRLY-IPLPEASARKQIVINLMSKEQCCLSEEEIEQIVQQSDAFSGADMTQLCREASLGPIRSLQTAATITPDQVRPIAYIDFENAFRTVRPSVSPKDLELYENWNKTFGC
[Model]
468-763
3d8bA
14%
>target
----------------------------SIYEHEDIKKGILLQLFGG--TRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNES--TRSVL---HEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRF--SNKVEAIDVEEAKRL------------------------
>3d8bA
ERLKNLEPKMIELIMNEIMDHGPPVNWEDIAGVEFAKATIKEIVVWPMLRPDIFTGLR-GPPK---GILLFGPPGTGKTLIGKCIASQSGATFFSISASSLTSKWVGEGEKMVR-----ALFAVARC---QQPAVIFIDEIDSLLSQESSRRIKTEFLVQLD-------------GSEDRILVVGATNRPQ-------------EIDEAARRRLVKRLY-IPLPEASARKQIVINLMSK----------------------------EQCCLSEEEIEQIVQ-------QS--DA---FSGADMTQLCREASLGPIRSLQTVRPIAYIDFENAFRTVRPSVSPKDLELYENWNKTFGCGK
[Model]
3n70: THE CRYSTAL STRUCTURE OF THE P-LOOP NTPASE DOMAIN OF THE STRANSPORT ACTIVATOR FROM E. COLI TO 2.8A Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
500-646
3n70C
9%
>target
--------------RAEINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLI----
>3n70C
EWINQYRRRLQQLSETDIAVWLYGAPGTGRMTGARYLHQFGRNAQGEFVY--------------RELT-PDN-ALNDFIALAQGGTLVLSHPEHLTREQQYHLVQLQSQEHR-----------P--FRLIGIGDTS-----LV-ELAASNHIIAELYYCFAMTQIAC
[Model]
500-647
3n70A
13%
>target
------------------RAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKD--PET-RQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIF-------
>3n70A
IGRSEWINQYRRRLQQLSETDIAVWLYGAPGTGRMTGARYLHQFGRNAQ----------G--EFVYRELTPDNAPQL---NDFIALAQGGTLVLSHPEHLTREQQYHLVQLQSQEHR-------------PFRLIGIGDTS------LVELAASNHIIAELYYCFAMTQIACLPLT
[Model]
501-594
3n70D
15%
>target
-------AEINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQT---------------------------
>3n70D
RLQQLSETDIAVWLYGAPGTGRMTGARYLHQFGRNAQGEFVYRELT------------PDNAP-QL-NDFIALAQGGTLVLSHPEHLTREQQYHLVQLQSQEHRPFRLIGIGDTSLVEIAELYYCFAMTQ
[Model]
500-647
3n70E
10%
>target
----------------RAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIF------
>3n70E
RSEWINQYRRRLQQLSETDIAVWLYGAPGTGRMTGARYLHQFGRNAQ----E---------FVYRELTPDNAPQLNDFIALAQGGTLVLSHPEHLTREQQYHLVQLQSQEHRP-------------FRLIGIGDTS-----LVE-LAAS-NIIAELYYCFAMTQIACLPL
[Model]
500-646
3n70G
10%
>target
----------RAEINILLCGDPGTSKSQLLQYVYNLVPRG--QYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLI----
>3n70G
QYRRRLQQLSETDIAVWLYGAPGTGRMTGARYLHQFGRNAQGEFVYRELT------------PD-NAPQL-NDFIALAQGGTLVLSHPEHLTREQQYHLVQLQSQEHRP-------------FRLIGIGDT-----SLVE-LAA--SIIAELYYCFAMTQIAC
[Model]
500-618
3n70H
11%
>target
----------RAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANP------------------
>3n70H
QYRRRLQQLSETDIAVWLYGAPGTGRMTGARYLHQFGRNAQG-----E-------FVYRELTPDNAPQLNDFIALAQGGTLVLSHPEHLTREQQYHLVQLQSQEHR-------------PFRLIGIGDTSLVELAASNHIIAELYYC
[Model]
3h4m: AAA ATPASE DOMAIN OF THE PROTEASOME- ACTIVATING NUCLEOTIDA Solved by: X-RAY, Resolution: 3.11A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-764
3h4mA
15%
>target
-------------SIYEHEDIKKGIL--LQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSA----VGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNES----TRSVLHEVMEQQTLSIAKAGII-CQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLL--SRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLH-------
>3h4mA
AMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVG---IEPPKGILLYGPPGTGKTLLAKAVATETNATFIRV-VGSELVKKFIGEGASLVK-----DIFKLAKE---KAPSIIFIDEIDAIAAKRTDALTGGDREVQ--RTLMQLLAEMDGFDARGDVKIIGATNRPD-------------ILDPAILRPGRFDRIIEV-PAPDEKGRLEILKIHTRKM--------------------------NLAE---DVNLEEIA-----KM--TE--G---CVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIMEKKKVK
[Model]
468-764
3h4mB
15%
>target
-------------SIYEHEDIKKGIL--LQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSA----VGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNES----TRSVLHEVMEQQTLSIAKAGII-CQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLL--SRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLH-------
>3h4mB
AMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVG---IEPPKGILLYGPPGTGKTLLAKAVATETNATFIRV-VGSELVKKFIGEGASLVK-----DIFKLAKE---KAPSIIFIDEIDAIAAKRTDALTGGDREVQ--RTLMQLLAEMDGFDARGDVKIIGATNRPD-------------ILDPAILRPGRFDRIIEV-PAPDEKGRLEILKIHTRKM--------------------------NLAE---DVNLEEIA-----KM--TE--G---CVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIMEKKKVK
[Model]
468-764
3h4mC
15%
>target
-------------SIYEHEDIKKGIL--LQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSA----VGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNES----TRSVLHEVMEQQTLSIAKAGII-CQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLL--SRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLH-------
>3h4mC
AMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVG---IEPPKGILLYGPPGTGKTLLAKAVATETNATFIRV-VGSELVKKFIGEGASLVK-----DIFKLAKE---KAPSIIFIDEIDAIAAKRTDALTGGDREVQ--RTLMQLLAEMDGFDARGDVKIIGATNRPD-------------ILDPAILRPGRFDRIIEV-PAPDEKGRLEILKIHTRKM--------------------------NLAE---DVNLEEIA-----KM--TE--G---CVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIMEKKKVK
[Model]
2x8a: HUMAN NUCLEAR VALOSIN CONTAINING PROTEIN LIKE (NVL), C- TERMINAL AAA-ATPASE DOMAIN Solved by: X-RAY, Resolution: 2.60A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
469-766
2x8aA
15%
>target
IYEHEDIKKGILLQL--FGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQ--LVLQTGALVLS---DNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLL--SRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEA-SQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHRE--
>2x8aA
IGALEDIREELTMAILAPVRNPDQFKALG---LVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISV-KGPE---L-----LNMYVGESERAVR-QVFQRAKNSAPCVIFFDEVDALCPSVR-VVNQLLTE--M----DGLE--ARQQVFIMAATNRPD-------------IIDPAILRPGRLDKTLFV-GLPPPADRLAILKTITKNG---------------------------TKPPLDADVNLEAIAG---DLR-------CDCYTGADLSALVREASICALRQEMLKVSHKHFEEAFKKVRSSI
[Model]
1ixr: RUVA-RUVB COMPLEX Solved by: X-RAY, Resolution: 3.30A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-858
1ixrC
15%
>target
--------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRA--EINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKA-GIIC---QLN-ARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHREALKQSATDPRTGIVDISILTTGMSATSRKRKEELAEALRKLILSKGKTPALKYQQLFEDIRGQSDTAITKDMFEEALR-ALADDDFLTVTGKT-----------
>1ixrC
ALRPKTLDEYIGQERLKQKLRVYLEAAK-----------ARKEPLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEKPG-------D-LAAI--LA-N--SLEEGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGATTRP-------------GLITAPLLSRFGIVEHL-EYYTPEELAQGVMR---------------------------DARL-LGVRITEEAALEIGRR-------SR------GTMRVAKRLFRRVRDFAQVAGEEVITRERALEALAALG-------LD-ELGL----------EKRDR----EILE----VLILRFGGGPVGLATLATAL------SEDPGTLEEVHEPYLIRQGLLKRTPRGRVATELARRHL
[Model]
3b9p: SPASTIN Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-765
3b9pA
15%
>target
--------------------SIYEHEDIKKGILLQLF--GGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYT-SGKG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTR------SVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHA--K--VRFSNKVEAIDVEEAKRLHR---------------
>3b9pA
KLVQLILDEIVEGGAKVEWTDIAGQDVAKQALQEMVILPSVRPELFTGL-RAPAK---GLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRA-----LFAVAR---HMQPSIIFIDEVDSLLSEREASRRLKTEFLVEFDG-------------L-PRIVVLAATNRPQ-------------ELDEAALRRFTKRVY-VSLPDEQTRELLLNRLLQKQ----------------------------GSPLDTEALRRLAK-------ITD--G---YSGSDLTALAKDAALEPIRELNISAMRAITEQDFHSSLKRIRRSVAPQSLNSYEKWS
[Model]
2r44: CRYSTAL STRUCTURE OF PUTATIVE ATPASE (YP_676785.1) FROM CYTOPHAGA HUTCHINSONII ATCC 33406 AT 2.00 A RESOLUTION Solved by: X-RAY, Resolution: 2.00A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
456-763
2r44A
15%
>target
---------------DIYERLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSS-------RGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRL----------------------------------
>2r44A
GMELKSAEEKSLYYRNKIKEVIDEVGKVVVGQKYMINRLLIGICTGG----------------HILLEGVPGLAKTLSVNTLAKTMDLDFHRIQFTPDLLPSDLIGTMIYNQHKGNFEVKKGPVF---SNFILADEVNRSPAKVQSALLECMQEKQVTIG--DTTYPLDNPFLVLATQNPVEQE--------GTYPLPEAQVDRFMMK-IHLTYLDKESELEVMRRVSNMNFN---YQVQKIVSKNDVLEIRNEINK-V--TISESLEKYIIELVFATRFPAEYGLEAEASYILYGASTRAAINLNRVAKAMAFFNNRDYVLPEDIKEVAYDILNHRIILNYEAEAEGISTRQIIETILRKVNITK
[Model]
3pvs: STRUCTURE AND BIOCHEMICAL ACTIVITIES OF ESCHERICHIA COLI M Solved by: X-RAY, Resolution: 2.50A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
503-667
3pvsB
15%
>target
-------------------------------------INILLCGDPGTSKSQLLQYVYNLVPRGQYT-SGKGSSAVGLTAYVMKDPETRQLVLQT--GALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAA--NPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3pvsB
QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTS---GV--KEIREA------IERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTIT---------------FIGATTENPS-------------FELNSALLSRARVYL-L-KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRY
[Model]
503-667
3pvsD
16%
>target
-------------------------------------INILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGA-LVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAA--NPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3pvsD
QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGV-------KE--IREAIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTIT---------------FIGATTENPS-------------FELNSALLSRARVYL--LKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR
[Model]
503-666
3pvsA
15%
>target
-------------------------------------INILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTG-ALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAA--NPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3pvsA
QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERIS-AV-----TSGV-KE--IREAIERARQNRNAGRRTILFVDEVHRFA------FLPHIEDGTIT---------------FIGATTENPS-------------FELNSALLSRARV-YLL-KSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIAGERSARKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRY
[Model]
503-667
3pvsC
15%
>target
-------------------------------------INILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTG-ALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAA--NPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3pvsC
QPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERIS-A-VTSGV--KEIRE-----AIERARQNRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTIT---------------FIGATTENPSF-------------ELNSALLSRARVY-L-LKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMMADMAEVDDSGKRVLKPELLTEIARFDNKGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKEYRYAHDEANAYAAGEVYFPPEIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR
[Model]
4fct: CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN OF CLPB Solved by: X-RAY, Resolution: 4.00A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
460-752
4fctA
15%
>target
------RLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIES----QWN---PKK----TTIEN--IQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIR--LAEAHAKVRFSNKV---------------------
>4fctA
EREKLLRLEEELHKRVVGQDEAIRAVADAIRRARA-GLKDPN----RPIGSFLFLGPTGVGKTELAKTLAATL----FDTEEAMIRIDMTEYMEKHAVSR-LQL-TEAVRRRPYSVILFDAIEKAHPDVFNILLQILDDGRLTDSH-GRTVDF-RNTVIILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRP-LTKEQIRQIVEIQLSY-----------------LRAR--LAEKRISLELTEAAKDFLAERGYDP-----VF-----GARPLRRVIQRELETPLAQKILAGEVKEGDRVQVDVGPAGLVFAVPA
[Model]
2x31: MODELLING OF THE COMPLEX BETWEEN SUBUNITS BCHI AND BCHD OFCHELATASE BASED ON SINGLE-PARTICLE CRYO-EM RECONSTRUCTION Solved by: X-RAY, Resolution: 7.50A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
467-765
2x31L
15%
>target
------PSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPR----------GQYTSGKGSSA-----------------------VGLTAY--VMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHST-IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHR---------------
>2x31L
RPVFPFSAIVGQEDMKLALLLTAVDP--------------GIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEG------------DLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGS---------DGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRVARTVEETLP
[Model]
467-765
2x31H
15%
>target
------PSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPR----------GQYTSGKGSSA-----------------------VGLTAY--VMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHST-IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHR---------------
>2x31H
RPVFPFSAIVGQEDMKLALLLTAVDP--------------GIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEG------------DLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGS---------DGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRVARTVEETLP
[Model]
467-765
2x31K
15%
>target
------PSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPR----------GQYTSGKGSSA-----------------------VGLTAY--VMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHST-IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHR---------------
>2x31K
RPVFPFSAIVGQEDMKLALLLTAVDP--------------GIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEG------------DLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGS---------DGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRVARTVEETLP
[Model]
467-765
2x31G
15%
>target
------PSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPR----------GQYTSGKGSSA-----------------------VGLTAY--VMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHST-IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHR---------------
>2x31G
RPVFPFSAIVGQEDMKLALLLTAVDP--------------GIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEG------------DLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGS---------DGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRVARTVEETLP
[Model]
467-765
2x31J
15%
>target
------PSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPR----------GQYTSGKGSSA-----------------------VGLTAY--VMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHST-IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHR---------------
>2x31J
RPVFPFSAIVGQEDMKLALLLTAVDP--------------GIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEG------------DLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGS---------DGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRVARTVEETLP
[Model]
467-765
2x31I
15%
>target
------PSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPR----------GQYTSGKGSSA-----------------------VGLTAY--VMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHST-IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHR---------------
>2x31I
RPVFPFSAIVGQEDMKLALLLTAVDP--------------GIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEG------------DLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGS---------DGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRVARTVEETLP
[Model]
1iy1: CRYSTAL STRUCTURE OF THE FTSH ATPASE DOMAIN WITH ADP FROM THERMUS THERMOPHILUS Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-761
1iy1A
15%
>target
-----SIYEHEDIKKGIL--LQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKG---SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRS-----VLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLL--SRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAK-
>1iy1A
KVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMG----ARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVEMFVGVGAARVR-----DLFETA---KRHAPCIVFIDEIDAVGRNDEREQTLNQLLVEMDGF-----------EKDTAIVVMAATNRPD-------------ILDPALLRPGRFDRQIAI-DAPDVKGREQI----LRIHARGKP----------------------LAEDVD---LALL----AK---RTP-----GFVGADLENLLNEAALLAAREGRRKITMKDLEEAAS
[Model]
1hqc: STRUCTURE OF RUVB FROM THERMUS THERMOPHILUS HB8 Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-858
1hqcB
15%
>target
--------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKGSSAVGLTAYVMKDPETRQLVLQTGAL--VLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAK----AGIICQL-NARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHREALKQSATDPRTGIVDISILTTGMSATSRKRKEELAEALRKLILSKGKTPALKYQQLFEDIRGQSDTAITKDMFEEALR-ALADDDFLTVTGKT-----------------
>1hqcB
ALRPKTLDEYIGQERLKQKLRVYLEAAKAR----K-----EPLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEKPG------------DL---AAILANSLEEGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGATTRP-------------GLITAPLLSRFGIVEHL-EYYTPEELAQGVMR---------------------------DARL-LGVRITEEAALEIGRR-------S------RGTMRVAKRLFRRVRDFAQVAGEEVITRERALEALAALGLD--------E----------LGLEKRDRE----ILEVL---ILRFGGGP-VGLATLATAL------SEDPGTLEEVHEPYLIRQGLLKRTPRGRVPTELAYRHLGYPPPV
[Model]
468-858
1hqcA
15%
>target
--------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKGSSAVGLTAYVMKDPETRQLVLQTGAL--VLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAK----AGIICQL-NARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHREALKQSATDPRTGIVDISILTTGMSATSRKRKEELAEALRKLILSKGKTPALKYQQLFEDIRGQSDTAITKDMFEEALR-ALADDDFLTVTGKT-----------------
>1hqcA
ALRPKTLDEYIGQERLKQKLRVYLEAAKAR----K-----EPLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGPAIEKPG------------DL---AAILANSLEEGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGATTRP-------------GLITAPLLSRFGIVEHL-EYYTPEELAQGVMR---------------------------DARL-LGVRITEEAALEIGRR-------S------RGTMRVAKRLFRRVRDFAQVAGEEVITRERALEALAALGLD--------E----------LGLEKRDRE----ILEVL---ILRFGGGP-VGLATLATAL------SEDPGTLEEVHEPYLIRQGLLKRTPRGRVPTELAYRHLGYPPPV
[Model]
3u61: STRUCTURE OF T4 BACTERIOPHAGE CLAMP LOADER BOUND TO CLOSEDAND ATP ANALOG AND ADP Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-661
3u61C
15%
>target
----------------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGD-PGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMN-ESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRL------------------------------------------------------------------------------------------------------------------------------------------------------
>3u61C
SMITVNEKEHILEQKYRPSTIDECILPAFDKETFKSITSKG---------K-----IPHIILHSPSPGTGKTTVAKALCHDVNADMMFV-NGS-DCKI--DFVRGPL-TNFAS-A-ASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAY-------------SSNCSIIITANNID-------------GIIKPLQSRCRVIT-F-GQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQW
[Model]
468-665
3u61D
14%
>target
----------------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGD-PGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGA-L--VLSDNGICCIDEFDKMN-ESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHL---------------------------------------------------------------------------------------------------------------------------------------------------
>3u61D
SMITVNEKEHILEQKYRPSTIDECILPAFDKETFKSIT-SK-------G-K-----IPHIILHSPSPGTGKTTVAKALCHDVNADMMFV-NGS-DCKI--DFVRG-----P-LTNFASAASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAY-------------SSNCSIIITANNID-------------GIIKPLQSRCRVIT--FGQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAGILSLVTNDRGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQWK
[Model]
468-665
3u61B
14%
>target
--------------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGD-PGTSKSQLLQYVYNLVPRGQ-YTSGKGSSAVGLTAYVMKDPETRQLVLQTGA-LVLSDNGICCIDEFDKMNE-STRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHL--------------------------------------------------------------------------------------------------------------------------------------
>3u61B
ITVNEKEHILEQKYRPSTIDECILPAFDKETFKSIT-S-------KG-K-----IPHIILHSPSPGTGKTTVAKALCHDVNADMMFVNGS---DCKI--DFVRGPLT-NF---ASAASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAY-------------SSNCSIIITANNID-------------GIIKPLQSRCRVI-TF-GQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSYSSKGVLDAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACEMQW
[Model]
468-647
3u61E
15%
>target
-------------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGD-PGTSKSQLLQYVYNLVPRG-QYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMN-ESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIF--------------------------------------------------------------------------------------------------------------------------------------------
>3u61E
TVNEKEHILEQKYRPSTIDECILPAFDKETFKSITSK--------G-K-----IPHIILHSPSPGTGKTTVAKALCHDVNADMMFVNGSD---CKI--DFVRGPL-TNFA--SAASFDGRQKVIVIDEFDRSGLAESQRHLRSFMEAY-------------SSNCSIIITANNID-------------GIIKPLQSRCRVITFGQPTDEDKIEMMKQMIRRLTEICKHEGIAIADMKVVAALVKKNFPDFRKTIGELDSGAIDDVLESLKNKDVKQLRALAPKYAADYSWFVGKLAEEIYSRVTPQSIIRMYEIVGENNQYHGIAANTELHLAYLFIQLACE
[Model]
1g8p: CRYSTAL STRUCTURE OF BCHI SUBUNIT OF MAGNESIUM CHELATASE Solved by: X-RAY, Resolution: 7.50A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
467-765
1g8pA
15%
>target
------PSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPR----------GQYTSGKGSSA-----------------------VGLTAY--VMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHST-IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHR---------------
>1g8pA
RPVFPFSAIVGQEDMKLALLLTAVDP--------------GIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVLSTNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLEDHIVDLLLDVAQSGENVVERDGLSIRHPARFVLVGSGNPEEG------------DLRPQLLDRFGLSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDMDIRNQILEARERLPKVEAPNTALYDCAALCIALGS---------DGLRGELTLLRSARALAALEGATAVGRDHLKRVATMALSHRLRVARTVEETLP
[Model]
1in6: THERMOTOGA MARITIMA RUVB K64R MUTANT Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-765
1in6A
14%
>target
---------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAE--INILLCGDPGTSKSQLLQYVYNLVPRGQY-TSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHR------------------------------------------------------------------------------
>1in6A
QFLRPKSLDEFIGQENVKKKLSLALEAAK-----------MRGEVLDHVLLAGPPGLGRTTLAHIIASELQTNIHVTSGPVLVKQGDMAAILT--------------SLERGDVLFIDEIHRLNKAVEELLYSAIEDFQIDIDIQPFT--------LVGATTRSG-------------LLSSPLRSRFGIILEL-DFYTVKELKEIIKRAAS---------------------------L-MDVEIEDAAAEMIAKRS-------R------GTPRIAIRLTKRVRDMLTVVKADRINTDIVLKTMEVLNIDDEGLDEFDRKILKTIIEIYRGGPVGLNALAASLGVEADTLSEVYEPYLLQAGFLARTPRGRIVTEKAYKHLKYEVP
[Model]
2c9c: STRUCTURAL BASIS OF THE NUCLEOTIDE DRIVEN CONFORMATIONAL CHANGES IN THE AAA DOMAIN OF TRANSCRIPTION ACTIVATOR PSPF Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
501-757
2c9cA
14%
>target
--------------------AEINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTSGKGSSAVGLTAYVMKDPETR-QLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIA-YAHST---IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDV--------
>2c9cA
LLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQGPFISLNC---AALNENLLDSELFGHEAKRHPGRFERADGGTLFLDELATAPMMVQEKLLRVIEYGELERVG--GSQPLQVNVRLVCATNAD-----LP-AMVNEGTFRADLLDRLAFDVVQLPPL---RER-----------------ESDI--MLMAEYFAIQMCREIKLPLFPGFTERARETLLNY------------RWPGNIAELKNVVERSV---YRHGTSDYPLDDIIIDPFKRR
[Model]
2vii: PSPF1-275-MG-AMP Solved by: X-RAY, Resolution: 2.85A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
501-757
2viiA
14%
>target
---------------------AEINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTSGKGSSAVGLTAYVMKDP--ETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIA-YAHS---TIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDV---------
>2viiA
NLLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQGPFISLNC---AALNENLLDSELFGHEAQKRHPGRFERADGGTLFLDELATAPMMVQEKLLRVIEYGELER--VGGSQPLQVNVRLVCATNA-----DLP-AMVNEGTFRADLLDRLAFDVVQLPPLRER--------------------ESDI--MLMAEYFAIQMCREIKLPLFPGFTERARETLLNY------------RWPGNIRELKNVVERSVY---RHGTSDYPLDDIIIDPFKRRP
[Model]
2c96: STRUCTURAL BASIS OF THE NUCLEOTIDE DRIVEN CONFORMATIONAL CHANGES IN THE AAA DOMAIN OF TRANSCRIPTION ACTIVATOR PSPF Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
501-757
2c96A
14%
>target
--------------------AEINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAY-AHS---TIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDV-------
>2c96A
LLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQGPFIS--------LNCAALNENLLDSELFHPGRFERADGGTLFLDELATAPMMVQEKLLRVIEYGELER--VGGSQPLQVNVRLVCATNAD-----LP-AMVNEGTFRADLLDRLAFDVVQLPPLR---ER-----------------ESDI--MLMAEYFAIQMCREIKLPLFPGFTERARETLLNY------------RWPGNIRELKNVVERSVY---RHGTSDYPLDDIIIDPFKR
[Model]
1g3i: CRYSTAL STRUCTURE OF THE HSLUV PROTEASE-CHAPERONE COMPLEX Solved by: X-RAY, Resolution: 3.41A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-712
1g3iV
15%
>target
--------------SIYEHEDIKKGILLQLFG---GTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKGSS-AVGLTAYVMKDPE-------TRQLVLQTGALVLSDNGICCIDEFDKMNES---------TRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAH-STIMPRLSEEASQALIEA----------------------------------------------------------------
>1g3iV
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQL--QEPLRHE-VTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEAEVDSIIRDLTDSAMKLVRQQEIAKNNPEELKQKAIDAVEQNGIVFIDEIDKICKKSGADVSREGVQRDLLPLVEGSTVSTKHG-MVKTD--HILFIASGA-----FQVAR----PSDLIPELQGRLPIRVEL-TALSAADFERILTE----P------------HASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
468-712
1g3iW
16%
>target
--------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKG--SSAVGLTAYVMKDPETRQLVLQTGAL------VLSDNGICCIDEFDKMNES---------TRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAY-AHSTIMPRLSEEASQALIEA----------------------------------------------------------------
>1g3iW
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEAEVDSIIRDLTDSAMKLVRQQEIAKNREELKQKAIDAVEQNGIVFIDEIDKICKKSGADVSREGVQRDLLPLVEGSTVSTK--HGMVKT-DHILFIASGAF-----QV----ARPSDLIPELQGRLPIRVEL-TALSAADFERILTEP----------------HASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
467-717
1g3iT
14%
>target
-------------PSIYEHEDIKKGILLQLF---GGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRG-QYTSGKGSS-AVGLTA-------------YVMKDPETRQLVLQTGAL-----------VL-SDNGICCIDEFDKMNE---------STRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAY-AHSTIMPRLSEEASQALIEAYVNMR-----------------------------------------------------------
>1g3iT
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQ--EPLRHEV-TPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEAEVDSIIRDLTDSAMKLVRQQEIAKNRARAEDVAEIDDEAAKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKSGADVSREGVQRDLLPLVEGSTVSTKH-GMVKT--DHILFIAS-----GAFQVAR----PSDLIPELQGRLPIRVEL-TALSAADFERILTEPHA----------------SLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
466-737
1g3iU
13%
>target
------------APSIYEHEDIKKGILLQLF---GGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTS-GKGSSA----VGLTAYVMKDPETR-QLVLQTGAL------------VLSDNGICCIDEFDKMNES---------TRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHS-TIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLI--------------------------------------------
>1g3iU
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQ--EPLRHEV-TPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEAEVDSIIRDLTDSAMKLVRQQEIAKNRDDEAAKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKSGADVSREGVQRDLLPLVEGSTVSTKHGMV-K--TDHILFIASGAFQ-----VA----RPSDLIPELQGRLPIRVEL-TALSAADFERILTEPH----------------ASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEK-----TENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
468-737
1g3iS
16%
>target
--------------SIYEHEDIKKGILLQLF---GGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSA---VGLTAYVMK---DPETRQ---LV----LQTGAL-VLSDNGICCIDEFDKMNES---------TRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAH-STIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLI--------------------------------------------
>1g3iS
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQ--EPLR-HEVTPKNILMIGPTGVGKTEIARRLAKLANAPFI-KVEAEVDSIIRDLTDSAMKLVRQQEIAKNRKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKSGADVSREGVQRDLLPLVEGSTVST-KHGMVKT--DHILFIASGAFQV---------ARPSDLIPELQGRLPIRVE-LTALSAADFERILTEPH----------------ASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNE-----KTENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
464-738
1g3iE
16%
>target
----------ALAPSIYEHEDIKKGILLQLFGGTRKD-FSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYT-SG-----KGSSAVGLTAYVMKDPETRQLV----------LQTGALVLSDNGICCIDEFDKMNESTR--------SVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAH-STIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIR-------------------------------------------
>1g3iE
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLR-HEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVDSIIRDLTDSAMK--LVRQQEIAKNRNPEELKQKAIDAVEQNGIVFIDEIDKICKKGADVSREGVQRDLLPLVEGSTVSTKHGMVKT---DHILFIASGAFQVAR---------PSDLIPELQGRLPIRVEL-TALSAADFERILTEPHA----------------SLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKT-----ENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
468-738
1g3iA
14%
>target
--------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYT-SGKGSSAVG------------LTA----YVMKDPETRQL------VLQTGALVLSDNGICCIDEFDKMNESTRS--------VLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYA-HSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIR-------------------------------------------
>1g3iA
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVDSIIRDLTDSAMKLVRQQEIAKNRIDDEAAKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKGADVSREGVQRDLLPLVEGSTVSTK-HGMVKTDHI--LFIASGAF-----QVA----RPSDLIPELQGRLPIRVELT-ALSAADFERILTEPH----------------ASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNE-----KTENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
468-738
1g3iB
14%
>target
--------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYT-SGKGSSAVG------------LTA----YVMKDPETRQL------VLQTGALVLSDNGICCIDEFDKMNESTRS--------VLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYA-HSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIR-------------------------------------------
>1g3iB
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVDSIIRDLTDSAMKLVRQQEIAKNRIDDEAAKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKGADVSREGVQRDLLPLVEGSTVSTK-HGMVKTDHI--LFIASGAF-----QVA----RPSDLIPELQGRLPIRVELT-ALSAADFERILTEPH----------------ASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNE-----KTENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
464-738
1g3iX
14%
>target
----------ALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAE---INILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKGSSA------VGLTA----YVMKDPET--R----Q-LVLQTGALVLSDNGICCIDEFDKMNE---------STRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAH-STIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIR-------------------------------------------
>1g3iX
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQ-LQE--PLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEAEVDSIIRDLTDSAMKLVRQQEIAKNIDDEAAKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKSGADVSREGVQRDLLPLVEGSTVSTKHGMVKT---DHILFIASGA-----FQVA----RPSDLIPELQGRLPIRVEL-TALSAADFERILTEPH----------------ASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEK-----TENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
468-737
1g3iD
15%
>target
--------------SIYEHEDIKKGILLQLF---GGTRKDFSHTGRGKFRA---EINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSG-----KGSSAVGLTAYVMKDPETRQ----------LVLQTGALVLSDNGICCIDEFDKMNESTRSVLH--------EVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAH-STIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLI--------------------------------------------
>1g3iD
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQL--QEP----LRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVDSIIRDLTDSAMK-LVRQQEIAKNRANPEELKQKAIDAVEQNGIVFIDEIDKICKKGADVSREGVQRDLLPLVEGSTVSTKHGMVKT---DHILFIASGA-----FQV----ARPSDLIPELQGRLPIRVEL-TALSAADFERILTEPHA----------------SLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTE-----NIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
467-738
1g3iF
14%
>target
-------------PSIYEHEDIKKGILLQLF---GGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQY-TSGKGSSAVGL-----TAYVMKDPETRQLVLQTGAL-----------VLSDNGICCIDEFDKMNESTR--------SVLHEVMEQQTLSIAKAGIICQLNAR-TSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAY-AHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIR-------------------------------------------
>1g3iF
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQ--EPL-RHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVDSIIRDLTDSAMKLVRQQEIAKNRARINPEELKQKAIDAVEQNGIVFIDEIDKICKKGADVSREGVQRDLLPLVEGSTVSTKHG-M---VKTDHILFIASGAFQV---------ARPSDLIPELQGRLPIRVEL-TALSAADFERILTEPH----------------ASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTEN-----IGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
467-737
1g3iC
14%
>target
-------------PSIYEHEDIKKGILLQL---FGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSS--AVGLTAYVMKDP--ETRQLVLQ--------------TGAL--VLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAH-STIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLI--------------------------------------------
>1g3iC
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQL--QEPLR-HEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIK-VEATKFTEVD---SIIRDLTDSAMKLVRQQEIAKNRAINPEELKQKAIDAVEQNGIVFIDEIDKICKKGADVSREGVQRDLLPLVEGST---VSTKHGMVKTDHILFIASGA-FQVARPSDLIPELQGRLPIRVEL-TALSAADFERILT----EPH------------ASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNE-----KTENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
4hse: CRYSTAL STRUCTURE OF CLPB NBD1 IN COMPLEX WITH GUANIDINIUMAND ADP Solved by: X-RAY, Resolution: 2.20A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-717
4hseA
14%
>target
--------------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVY-NLVPRGQYTSGKGSSA-----VGLTAYVMKDPETRQLVLQTG----ALVLSDNG-ICCIDEFDKMNE--STRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIM-PRLSEEASQALIEAYVNMR------------------------------------------------------------------------------------------------------------------------------------
>4hseA
NALEQYGIDLTRLAAEGKLDPVIGRDEEIRRVIQIL-LR-------------RTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMGSLLAGA---KYRGEFEERLKAVIQEVVQSQGEVILFIDELHTVVGAVDAGNMLKPALARGE---------------LRLIGATTLDE--YR-------EIEKDPALERRFQPVY--VDEPTVEETISILRGLKEKY-EVH---HGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEAAARLRMALESAPEEIDALERKKLQLEIEREALSQERLKAIEAEIAKLTEEIAKLRAEWEREREILRKLREAQHRLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVEALSEKLRGARFVRLEVTEEDIAEIVSR
[Model]
4b4t: NEAR-ATOMIC RESOLUTION STRUCTURAL MODEL OF THE YEAST 26S P Solved by: X-RAY, Resolution: 7.40A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-764
4b4tK
14%
>target
-----------------------------------------------------------------------------------------------------------------------------SIYEHEDIKKGILLQLFG--GTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTG-------ALVLS-DNGICCIDEFDKMNES--------T---RSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLS--RFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLH--------------
>4b4tK
YFKLKKLEKEYELLTLQEDYIKDEQRHLKRELKRAQEEVKRIQSVPLVIGQFLEPIDQNTGIVSSTTGMSYVVRILSTLDRELLKPSMSVALHRHSNALVDILPPDSDSSISVMGENEKPDVTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRG---VLLYGPPGTGKTMLVKAVANSTKAAFIRV-NGS---EFV---------HKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGSDREVQRILIELLTQ-M-----DGFDQ--STNVKVIMATNRAD-------------TLDPALLRPGRLDRKIEFPSLRDRRERRLIFG----TIASKMSL-APE-ADLDS------LII----------------------R----ND---SLSGAVIAAIMQEAGLRAVRKNRYVILQSDLEEAYATQVKTDNTVDKFDFYK
[Model]
468-766
4b4tL
14%
>target
-------------------------------------------------------------------------------------------------------------------SIYEHEDIKKGILLQLFG--GTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVL-QTGALV-LSDNGICCIDEFDKMNES--------TR---SVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLS--RFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHRE---
>4b4tL
HRRYDDQLKQRRQNIRDLEKLYDKTENDIKALQSIGQLIGEVMKELSEEKYIVKASSGPRYIVGVRNSVDRSKLKKGVRVTLDITTLTIMRILPRETDPLVYNMTSFEQGEITFDGIGGLTEQIRELREVIELPLKNPEIFQRVG---IKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIF-SPAS---GIVD---KYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQ-M-----DGFDN--LGQTKIIMATNRPD-------------TLDPALLRPGRLDRKVEI-PLPNEAGRLE----IFKIHTAKVKKT-GE-FDFEAA------VKM------------------------S--DG---FNGADIRNCATEAGFFAIRDDRDHINPDDLMKAVRKVAEVKK
[Model]
468-766
4b4tM
13%
>target
------------------------------------------------------------------------------------------------------------------SIYEHEDIKKGILLQLFGG--TRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQ-TGALVL-SDNGICCIDEFDKMNES--------TR---SVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLS--RFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHRE----------
>4b4tM
IRIFRSELQRLSHENNVMLEKIKDNKEKIKNNRQLPYLVANVVEVVGKAAVVKTSSRQTVFLPMVGLVDPDKLKPNDLVGVNKDSYLILDTLPSEFDSRVKAMEVDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPK---GALMYGPPGTGKTLLARACAAQTNATFLKL-AAP---QLVQ---MYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGDREVQRTMLELLNQL------DGFSS--DDRVKVLAATNRVD-------------VLDPALLRSGRLDRKI-EFPLPSEDSRAQI----LQIHSRKMT----------------------TDDDIN-------------WQELARS--TDEFNGAQLKAVTVEAGMIALRNGQSSVKHEDFVEGISEVQARKSKSVSFYA
[Model]
468-765
4b4tJ
12%
>target
-----------------------------------------------------------------------------------------------------------------------------SIYEHEDIKKGILLQLFGG--TRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQY-TSGKGSSAVGLTAYVMKDPETRQLVLQTGALV-----LS---DNGICCIDEFDKMNES--------TR---SVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLL--SRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHR------
>4b4tJ
EQKIQETELKIRSKTENVRRLEAQRNALNDKVRFIKDELRLLQEPGSYVGEVIKIVSDKKVLVKVQPEGKYIVDVAKDINVKDLKASQRVCLRSDSYMLHKVLENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKG---VILYGPPGTGKTLLARAVAHHTDCKFIRVSG--A---ELV---------QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQ------LDGFET--SKNIKIIMATNRLD-------------ILDPALLRPGRIDRKIEF-PPPSVAARAEIL----RIHSRKMNL-TRG-INLRKV------AE----------------------K----MNG---CSGADVKGVCTEAGMYALRERRIHVTQEDFELAVGKVMNKNQET
[Model]
468-768
4b4tI
13%
>target
------------------------------------------------------------------------------------------------------------SIYEHEDIKKGILLQLFGGT-R-KDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSA----VGLTAYVMKDPETRQLVLQTGALV-LSDNGICCIDEFDKMNES--------TR---SVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLS--RFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHREAL----------
>4b4tI
FVSNSEILKPFEKKQEEEKKQLEEIRGNPLSIGTLEEIIDDDHAIVTSPTMPDYYVSILSFVDKELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKMDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPK---GVILYGAPGTGKTLLAKAVANQTSATFLRI-VGSELIQKYLGDGPRLCRQI---------FKVAGENAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQL------DGFDD--RGDVKVIMATNKIE-------------TLDPALIRPGRIDRKI-LFENPDLSTKK----KILGIHTSKMNLS-ED-VNLET------LVTT--------------------------KDD---LSGADIQAMCTEAGLLALRERRMQVTAEDFKQAKERVMKNKVEENLEGLYL
[Model]
504-767
4b4tH
14%
>target
---------------------------------------------------------------------------------------------------------------------------------------------------NILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSA----VGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNES--------TR---SVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLL--SRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHREA---
>4b4tH
LKQTENDLKDIEARIKEKAGVKESDTGLAHPLQVARCTKIIKGEDAKYVINLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRV-IGSELVQKYVGEGARMVREL----F-EMAR---TKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQ------LDGFDP--RGNIKVMFATNRPN-------------TLDPALLRPGRIDRKVEF-SLPDLEGRA----NIFRIHSKSMSVE-RG-IRWEL------ISR----------------------L--C--PN---STGAELRSVCTEAGMFAIRARRKVATEKDFLKAVDKVISGYKK
[Model]
1r6b: HIGH RESOLUTION CRYSTAL STRUCTURE OF CLPA Solved by: X-RAY, Resolution: 2.25A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
460-752
1r6bX
13%
>target
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYT-SGK----GSSAVGLTA----YVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNA-RTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEA-YVNMRKIGSSRGMVSAYPRQLESLIR--LAEAHAKVRFSNKV--------------------------
>1r6bX
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGLENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMAR-AGLGHE----HKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFD-QGGLL---TDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNN-GRK--ADFRNVVLVMTTNA-GVRAMEE----IKKIFTPEFRNRLDNIIW-FDHLSTDVIHQVVDKFIV-----------------ELQVQ--LDQKGVSLEVSQEARNWLAEKGYD-----------RAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQK
[Model]
503-717
1r6bX
14%
>target
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------INILLCGDPGTSKSQLLQYVYNL-VP---------RGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGAL---VL-SDNGICCIDEFDKMN--------ESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIM-PRLSEEASQALIEAYVNMR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>1r6bX
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGLENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIG---AG-----TK--YRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLL------SSG--------KIRVIGSTTYQE--F------SNIFEKDRALARRFQKI--DITEPSIEETVQIINGLKPKY-EAH---HDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQK
[Model]
2c98: STRUCTURAL BASIS OF THE NUCLEOTIDE DRIVEN CONFORMATIONAL CHANGES IN THE AAA DOMAIN OF TRANSCRIPTION ACTIVATOR PSPF Solved by: X-RAY, Resolution: 1.90A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
501-757
2c98A
14%
>target
--------------------AEINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTSGKGSSAVGLTAYVMKDP--ETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIA-YAHS---TIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDV-------
>2c98A
LLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQGPFISLNCA---ALNENLLDSELFGHEAQKRHPGRFERADGGTLFLDELATAPMMVQEKLLRVIEYGELER--VGGSQPLQVNVRLVCATNA-----DLP-AMVNEGTFRADLLDRLAFDVVQLPPL---RER-----------------ESDI--MLMAEYFAIQMCREIKLPLFPGFTERARETLLNY------------RWPGNIRELKNVVERSV---YRHGTSDYPLDDIIIDPFKR
[Model]
3zuh: NEGATIVE STAIN EM MAP OF THE AAA PROTEIN CBBX, A RED-TYPE ACTIVASE FROM R. SPHAEROIDES Solved by: X-RAY, Resolution: 21.00A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
466-665
3zuhF
14%
>target
----------------------APSIYEHEDIKKGILLQLFGGT---RKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQ-----TGALVLSDNGICCIDEFDKMNEST---------RSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHL--------------------------------------------------------------------------------
>3zuhF
PTSIDLRAEYEGSGAKEVLEELDRELIGLKPVKDRIR-ETAALLLVERARQKLG----LTPTLHMSFTGNPGTGKTTVALKMAGLLHRLGYVRKGH--LVSVTRD----DLVGQYIGHTAPKTKEVLKRAMGGVLFIDEAYYLYRPDNERDYGQEAIEILLQVMENNR-------------DDLVVILAGYAD--------RMENFFQSNPGFRSRIAHHIEF-PDYSDEELFEIAGHMLDDQNYQMTPEAETALRAYIGLRRNQPHFANARSIRNALDRARLRQANRLFTASSGPLDARALSTIAEEDIRASRVFKGG
[Model]
466-665
3zuhB
14%
>target
----------------------APSIYEHEDIKKGILLQLFGGT---RKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQ-----TGALVLSDNGICCIDEFDKMNEST---------RSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHL--------------------------------------------------------------------------------
>3zuhB
PTSIDLRAEYEGSGAKEVLEELDRELIGLKPVKDRIR-ETAALLLVERARQKLG----LTPTLHMSFTGNPGTGKTTVALKMAGLLHRLGYVRKGH--LVSVTRD----DLVGQYIGHTAPKTKEVLKRAMGGVLFIDEAYYLYRPDNERDYGQEAIEILLQVMENNR-------------DDLVVILAGYAD--------RMENFFQSNPGFRSRIAHHIEF-PDYSDEELFEIAGHMLDDQNYQMTPEAETALRAYIGLRRNQPHFANARSIRNALDRARLRQANRLFTASSGPLDARALSTIAEEDIRASRVFKGG
[Model]
466-665
3zuhE
14%
>target
----------------------APSIYEHEDIKKGILLQLFGGT---RKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQ-----TGALVLSDNGICCIDEFDKMNEST---------RSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHL--------------------------------------------------------------------------------
>3zuhE
PTSIDLRAEYEGSGAKEVLEELDRELIGLKPVKDRIR-ETAALLLVERARQKLG----LTPTLHMSFTGNPGTGKTTVALKMAGLLHRLGYVRKGH--LVSVTRD----DLVGQYIGHTAPKTKEVLKRAMGGVLFIDEAYYLYRPDNERDYGQEAIEILLQVMENNR-------------DDLVVILAGYAD--------RMENFFQSNPGFRSRIAHHIEF-PDYSDEELFEIAGHMLDDQNYQMTPEAETALRAYIGLRRNQPHFANARSIRNALDRARLRQANRLFTASSGPLDARALSTIAEEDIRASRVFKGG
[Model]
466-665
3zuhA
14%
>target
----------------------APSIYEHEDIKKGILLQLFGGT---RKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQ-----TGALVLSDNGICCIDEFDKMNEST---------RSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHL--------------------------------------------------------------------------------
>3zuhA
PTSIDLRAEYEGSGAKEVLEELDRELIGLKPVKDRIR-ETAALLLVERARQKLG----LTPTLHMSFTGNPGTGKTTVALKMAGLLHRLGYVRKGH--LVSVTRD----DLVGQYIGHTAPKTKEVLKRAMGGVLFIDEAYYLYRPDNERDYGQEAIEILLQVMENNR-------------DDLVVILAGYAD--------RMENFFQSNPGFRSRIAHHIEF-PDYSDEELFEIAGHMLDDQNYQMTPEAETALRAYIGLRRNQPHFANARSIRNALDRARLRQANRLFTASSGPLDARALSTIAEEDIRASRVFKGG
[Model]
466-665
3zuhD
14%
>target
----------------------APSIYEHEDIKKGILLQLFGGT---RKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQ-----TGALVLSDNGICCIDEFDKMNEST---------RSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHL--------------------------------------------------------------------------------
>3zuhD
PTSIDLRAEYEGSGAKEVLEELDRELIGLKPVKDRIR-ETAALLLVERARQKLG----LTPTLHMSFTGNPGTGKTTVALKMAGLLHRLGYVRKGH--LVSVTRD----DLVGQYIGHTAPKTKEVLKRAMGGVLFIDEAYYLYRPDNERDYGQEAIEILLQVMENNR-------------DDLVVILAGYAD--------RMENFFQSNPGFRSRIAHHIEF-PDYSDEELFEIAGHMLDDQNYQMTPEAETALRAYIGLRRNQPHFANARSIRNALDRARLRQANRLFTASSGPLDARALSTIAEEDIRASRVFKGG
[Model]
466-665
3zuhC
14%
>target
----------------------APSIYEHEDIKKGILLQLFGGT---RKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQ-----TGALVLSDNGICCIDEFDKMNEST---------RSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHL--------------------------------------------------------------------------------
>3zuhC
PTSIDLRAEYEGSGAKEVLEELDRELIGLKPVKDRIR-ETAALLLVERARQKLG----LTPTLHMSFTGNPGTGKTTVALKMAGLLHRLGYVRKGH--LVSVTRD----DLVGQYIGHTAPKTKEVLKRAMGGVLFIDEAYYLYRPDNERDYGQEAIEILLQVMENNR-------------DDLVVILAGYAD--------RMENFFQSNPGFRSRIAHHIEF-PDYSDEELFEIAGHMLDDQNYQMTPEAETALRAYIGLRRNQPHFANARSIRNALDRARLRQANRLFTASSGPLDARALSTIAEEDIRASRVFKGG
[Model]
2c99: STRUCTURAL BASIS OF THE NUCLEOTIDE DRIVEN CONFORMATIONAL CHANGES IN THE AAA DOMAIN OF TRANSCRIPTION ACTIVATOR PSPF Solved by: X-RAY, Resolution: 1.90A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
501-757
2c99A
14%
>target
--------------------AEINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTSGKGSSAVGLTAYVMKDPETR-QLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAY-AHS---TIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDV-------
>2c99A
LLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQGPFISLNC---AALNENLLDSELFGHEAKRHPGRFERADGGTLFLDELATAPMMVQEKLLRVIEYGELER--VGGSQPLQVNVRLVCATNAD-----L-PAMVNEGTFRADLLDRLAFDVVQLPPLR---ER-----------------ESDI--MLMAEYFAIQMCREIKLPLFPGFTERARETLLNY------------RWPGNIRELKNVVERS---VYRHGTSDYPLDDIIIDPFKR
[Model]
2bjv: CRYSTAL STRUCTURE OF PSPF(1-275) R168A MUTANT Solved by: X-RAY, Resolution: 1.70A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
501-757
2bjvA
14%
>target
------------------AEINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIA-YAHS---TIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDV------
>2bjvA
GEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQGPFISLN---CAALNENLLDSELFG-HERHPGRFERADGGTLFLDELATAPMMVQEKLLRVIEYGELERV--GGPLQVN--VRLVCATNAD------LPAMVNEGTFRADLLDALAFDVVQLPPL---RERE-----------------SDI--MLMAEYFAIQMCREIKLPLFPGFTERARETLLNY------------RWPGNIRELKNVVERS---VYRHGTSDYPLDDIIIDPFK
[Model]
1ny5: CRYSTAL STRUCTURE OF SIGM54 ACTIVATOR (AAA+ ATPASE) IN THEINACTIVE STATE Solved by: X-RAY, Resolution: 2.40A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
500-758
1ny5B
14%
>target
-------------------------------------------------------------------------------------------------------------------------------------------------------------RAEINILLCGDPGTSKSQLLQYVYNLVPRG--QYTSGKGSSAVGLTAYV--------MKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIA-YAHST--IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVE----
>1ny5B
MNVLVIEDDKVFRGLLEEYLSMKGIKVESAERGKEAYKLLSEKHFNVVLLDLLLPDVNGLEILKWIKERSPETEVIVITGHGTIKTAVEAMKMGAYDFLTKPCMLEEIELTINKAIEHRKLRKENELLRREKDLKEEEYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALN---VASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYR--LGGRKEIEVNVRILAATNRN-----IK-ELVKEGKFREDLYYRLGVIEIEIPPLRERK--------------------EDI--IPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYP------------WYGNVRELKNVIERAVLFSE---GKFIDRGELSCLVN
[Model]
500-758
1ny5A
14%
>target
-------------------------------------------------------------------------------------------------------------------------------------------------------------RAEINILLCGDPGTSKSQLLQYVYNLVPRG--QYTSGKGSSAVGLTAYV--------MKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIA-YAHST--IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVE---
>1ny5A
MNVLVIEDDKVFRGLLEEYLSMKGIKVESAERGKEAYKLLSEKHFNVVLLDLLLPDVNGLEILKWIKERSPETEVIVITGHGTIKTAVEAMKMGAYDFLTKPCMLEEIELTINKAIEHRKLRKENELLRREKDLKEEEYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALN---VASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYR--LGGRKEIEVNVRILAATNRN-----IK-ELVKEGKFREDLYYRLGVIEIEIPPLRERK--------------------EDI--IPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYP------------WYGNVRELKNVIERAVLFSE---GKFIDRGELSCLV
[Model]
3hws: CRYSTAL STRUCTURE OF NUCLEOTIDE-BOUND HEXAMERIC CLPX Solved by: X-RAY, Resolution: 3.25A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
464-712
3hwsC
14%
>target
----------ALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSA--VGLTAYVMKDPETRQLVLQ-----TGALVLSDNGICCIDEFDKMNES-----------TRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPI-----ES-QWNPK-----KTTI--ENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAY-AHSTIMPRLSEEASQALIEA----------------------------------------------------
>3hwsC
ALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNH-YKRLRNGD----TGKSNILLIGPTGSGKTLLAETLARLLDVPFT-MADATTLTEAG---YVGEDV-ENI-IQKLLQKCDYDVQKAQRGIVYIDQIDKISRNPSITRDVSGEGVQQALLKLIEGTVLQVDTS--------KILFICGGAFAGLDKVISHRVSEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLN-ELSEEALI----QILKEP------------KNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSEPLLIY
[Model]
464-738
3hwsF
15%
>target
----------ALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAE---INILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPET---RQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPI---------ESQW-----NPKKTTIE-------NIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAY-AHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIR-------------------------------------
>3hwsF
ALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKR-LRNGDT--SNGVELGKNILLIGPTGSGKTLLAETLARLLDVPFTMA-DAT---TLTGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDQIDKISRKSRDVSGEGVQQALLKLIEGTVAAVP--EFLQVDTSKILFICGGAFAGLDKVISHRASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATL-NELSEEALIQILKEPK----------------NALTKQYQALFNLEGVDLEFRDEALDAIAKKAM-------AR-K--TGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSEPLLIYG
[Model]
465-737
3hwsA
15%
>target
-----------LAPSIYEHEDIKKGILLQLFG---GTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSS--AVGLTAYVMKDPETRQLV--LQ--TGALVLSDNGICCIDEFDKMNES-----------TRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPI---------ESQWNPKKTTI---E--------NIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYA-HSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLI-------------------------------------
>3hwsA
ALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSN--GVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTM-ADATTLTEAG---YVGEDVE-NIIQKLLQKCDYDVQKAQRGIVYIDQIDKISRKSDNPRDVSGEGVQQALLKLIEGTFLQVD--------TSKILFICGGAFAGLDKVISHRVETGSDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATL-NELSEEA----LIQILKEP------------KNALTKQYQALFNLEGVDLEFRDEALDAIAKKAM-------AR---KTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSEPLLIY
[Model]
462-754
3hwsB
14%
>target
---------ASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTG--RGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYT-SGKGSSAVGLTAYVMKDPETRQLV----LQTGALVLSDNGICCIDEFDKMNE-STRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIES-------QWNPKK--TTIE--------NIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAY-AHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIR--LAEAHAKVRFSNKVEA-------------------
>3hwsB
SALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKR-LRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAG---YVGEDVE-NIIQKLLQKCDYDVQKAQRGIVYIDQIDKISREGVQQALLKLIEGTRKHPQ--QEFLQVDTSKILFICGGAFAGLDKVISHRVETASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATL-NELSEEALIQI----LKEPK------------NALTKQYQALFNLEGVDLEFRDEALDAIAKKAM-------A---RKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSEPLLIYG
[Model]
465-757
3hwsD
14%
>target
------------LAPSIYEHEDIKKGILLQLFGG---TRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKGSSAVGLTAYVMKDPE---TRQLVLQTGALVLSDNGICCIDEFDKMNESTR----SVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIE------SQWN---PKKTTIE--------NIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIA-YAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIR--LAEAHAKVRFSNKVEAIDV-----------------
>3hwsD
SALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTSNG--VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAG---YVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDQIDKISRVSGEGVQQALLKLIEGTVAAVPQ-----VDTSKILFICGGAFAGLDKVISHRVETGASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLN-ELSEEALIQILKEPKN----------------ALTKQYQALFNLEGVDLEFRDEALDAIAKKAM-------AR---KTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSEPLLIYGK
[Model]
465-651
3hwsE
13%
>target
------------LAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRG--KFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTS-GKGSSAVGLTAYVMKDPE---TRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIES-Q------WNPKKTTI-----------ENIQLPHTLLSRFDLIFLMLD--------------------------------------------------------------------------------------------------
>3hwsE
SALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKR-LRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAG---YVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDQIDKISREGVQQALLKLIEGTVAAF--LQVDT--SKILFICGGAFAGLDKVISHRVETGSASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSEPLLIYG
[Model]
1ofi: ASYMMETRIC COMPLEX BETWEEN HSLV AND I-DOMAIN DELETED HSLU (H. INFLUENZAE) Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
467-738
1ofiA
14%
>target
-------------PSIYEHEDIKKGILLQLF---GG--TRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYT-SGKG-SSAVGLTAYVMKDPETRQLVLQTGAL--VLSDNGICCIDEFDKMNES-----TRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAH-STIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIR-------------------------------------------
>1ofiA
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLR-----HEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGKEVDSII-----RDLTDSAGGAIDAVEQNGIVFIDEIDKICKDVSREGVQRDLLPLVEGSTVSTK-HGMVKTDH--ILFIASGAFQVA---------RPSDLIPELQGRLPIRVEL-TALSAADFERILTEPHA----------------SLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEK-----TENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
468-716
1ofiB
14%
>target
--------------SIYEHEDIKKGILLQLF---GGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETR--QLVLQTGA--LVLSDNGICCIDEFDKMNES-----TRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAH-STIMPRLSEEASQALIEAYVNM------------------------------------------------------------
>1ofiB
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQ--EP-LRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIK-VEATK--------FTEVDSIIRDLTDSAGGAIDAVEQNGIVFIDEIDKICKKVSREGVQRDLLPLVEGSTVSTKHGMVKTD---HILFIASGAFQ-----VA----RPSDLIPELQGRLPIRVEL-TALSAADFERILTEPHA----------------SLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
463-738
1ofiC
16%
>target
---------SALAPSIYEHEDIKKGILLQLF-----GGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTA--YVMKDPETRQLVLQTGALVL--SDNGICCIDEFDKMNES------TRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIA-YAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIR-------------------------------------------
>1ofiC
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQE----PLR-HEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKV-EAT---KFTEVDSIIRD-----LTDSAGGAIDAVEQNGIVFIDEIDKICKADVSREGVQRDLLPLVEGSTVST-KHGMVKTDH--ILFIASGA-----FQVAR----PSDLIPELQGRLPIRVEL-TALSAADFERILTEP----------------HASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTEN-----IGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
3nbx: CRYSTAL STRUCTURE OF E. COLI RAVA (REGULATORY ATPASE VARIACOMPLEX WITH ADP Solved by: X-RAY, Resolution: 2.91A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
459-760
3nbxX
14%
>target
---------ERLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETR--QLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAAN-PIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQS-EEQ-VEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3nbxX
HPHLLAERISRLSSSLEKGLYERSHAIRLCLLAALSGE----------------SVFLLGPPGIAKSLIARRLKFAFQNARAFE------YLMTRFSTPEEVFGPLSERLTSGYLPEA--EIVFLDEIWKAGPAILNTLLTAINERQFRN--GAHVEKIPMRLLVAASNELPEADS------------SLEALYDRMLIRLW-LDKVQDKANF---RSMLTSQQDENDNPVPDALQVTDEEYERWQKEIGE-I--TLPDHVFELIFMLRQQLDKLP---DAPYVSDRRWKKAIRLLQASAFFSGRSAVAPVDLILLKDCLWYDAQSLNLIQQQIDVLMTGHAWQQQGMLTRLGAIVQRHLQLQQQQSDKTALTVIRLGGIFSRRQQYQLPVNVTASTLTLLLQKPLKLHDMEVVHISFERSALEQWLSKGGEIRGKLNGIGFAQKLNLEVDSAQHLVVRDVSLQGSTLALPGSLPGEIKQQLEELESDWRKQHALFSEQQKCLFIPGDWLGRIEASLQDVGAQIRQAQQ
[Model]
2bjw: PSPF AAA DOMAIN Solved by: X-RAY, Resolution: 1.75A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
500-757
2bjwA
14%
>target
------------------RAEINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIA-YAHST---IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDV--------
>2bjwA
LGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKELIASRLHYLSSRWQGPFISLNC---AALNENLLDSELFGHEKRHPGRFERADGGTLFLDELATAPMMVQEKLLRVIEYGELER--VGGSQPLQVNVRLVCATNA-----DL-PAMVNEGTFRADLLDRLAFDVVQLPPL---RER-----------------ESDI--MLMAEYFAIQMCREIKLPLFPGFTERARETLLNY------------RWPGNIRELKNVVERSVYR---HGTSDYPLDDIIIDPFKRR
[Model]
1ixs: STRUCTURE OF RUVB COMPLEXED WITH RUVA DOMAIN III Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-858
1ixsB
14%
>target
---------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRA--EINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKA--GI--ICQLN-ARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHREALKQSATDPRTGIVDISILTTGMSATSRKRKEELAEALRKLILSKGKTPALKYQQLFEDIRGQSDTAITKDMFEEALR-ALADDDFLTVTGKT-----------------
>1ixsB
LALRPKTLDEYIGQERLKQKLRVYLEAAK-----------ARKEPLEHLLLFGPPGLGKTTLAHVIAHELGVNLRVTSGP----AI-----EK--PGDL-AAILANSLEEGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAARTIRLELPRFTLIGATTRPG-------------LITAPLLSRFGIVEHL-EYYTPE----------------------------ELAQGVMRDARLLGVRITEEAALEIGRR-------SR------GTMRVAKRLFRRVRDFAQVAGEEVITRERALEALAALG-------LD-EL----------GLEKRDRE----ILEVL---ILRFGGGP-VGLATLATAL------SEDPGTLEEVHEPYLIRQGLLKRTPRGRVATELAYRHLGYPPPV
[Model]
1im2: HSLU, HAEMOPHILUS INFLUENZAE, SELENOMETHIONINE VARIANT Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
464-717
1im2A
14%
>target
----------ALAPSIYEHEDIKKGILLQLF---GGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSS-----AVGL-TAYVMKD------------------------PETRQLVLQTGAL------------VLSDNGICCIDEFDKMNES----------TRSVLHEVMEQQTLSIAKAGIICQLNAR-TSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIA-YAHSTIMPRLSEEASQALIEAYVNMR-----------------------------------------------------------
>1im2A
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQL--QEPLRHEVTP-KNILMIGPTGVGKTEIARRLAKLANAP-FIKVEATKFTEVGYVGKEVDSIIRDLTDSAMKLVRQQEIAKNRARAEDVAEERLIDDEAAKLINPEELKQKAIDAVEQNGIVFIDEIDKICKEYSGADVSREGVQRDLLPLVEGSTVSTK-HGMV---KTDHILFIAS-----GAFQVARP----SDLIPELQGRLPIRVEL-TALSAADFERILT----EP------------HASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
3syl: CRYSTAL STRUCTURE OF THE AAA+ PROTEIN CBBX, NATIVE STRUCTU Solved by: X-RAY, Resolution: 21.00A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
465-719
3sylA
14%
>target
----------------------------LAPSIYEHEDIKKGILL-QLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSG-KG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRS------VLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKI---------------------------------------------------
>3sylA
MTDAATAPTSIDLRAEYEGSGAKEVLEELDRELIGLKPVKDRIRETAALLLVERARQKLGLAHETPTLHMSFTGNPGTGKTTVALKMAGLLHRLGYVRKGHLVSVTRDDLVGQYIGH--T--APKTKEVLKRAMGGVLFIDEAYYLYRPDDYGQEAIEILLQVMEN-------------NRDDLVVILAGYAD--------RMENFFQSNPGFRSRIAHHIEFPDY-SDEELFEIAGHML---------------------------DD-QNYQMTPEAETALRAYIGLRRNQPHFANARSIRNALDRARLRQANRLFTAPLDARALSTIAEEDIRASRVFKGG
[Model]
466-665
3sylB
14%
>target
----------------------APSIYEHEDIKKGILLQLFGGT---RKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQ-----TGALVLSDNGICCIDEFDKMNEST---------RSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHL--------------------------------------------------------------------------------
>3sylB
PTSIDLRAEYEGSGAKEVLEELDRELIGLKPVKDRIR-ETAALLLVERARQKLG----LTPTLHMSFTGNPGTGKTTVALKMAGLLHRLGYVRKGH--LVSVTRD----DLVGQYIGHTAPKTKEVLKRAMGGVLFIDEAYYLYRPDNERDYGQEAIEILLQVMENNR-------------DDLVVILAGYAD--------RMENFFQSNPGFRSRIAHHIEF-PDYSDEELFEIAGHMLDDQNYQMTPEAETALRAYIGLRRNQPHFANARSIRNALDRARLRQANRLFTASSGPLDARALSTIAEEDIRASRVFKGG
[Model]
3eie: CRYSTAL STRUCTURE OF S.CEREVISIAE VPS4 IN THE SO4-BOUND STATE Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-752
3eieA
14%
>target
-------------SIYEHEDIKKGILLQLFGGT--RKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKGSSAVGLT-AYVMKDPETRQLVLQT-GALV-LSDNGICCIDEFDKMNEST---R--SVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKV-----------------------------------------------------------------------
>3eieA
TAILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLF-KGNRKPTS---GILLYGPPGTGKSYLAKAVATEANSTFFSVSS--S---DLVSKWMG---ES-EKLVKQLFAMARENKPSIIFIDQVDALTGTEASRRIKTELLVQMN---------GVGND-SQGVLVLGATNIPW-------------QLDSAIRRRFERRIYI-PLPDLAARTTMFEI------------------------NV---G-DTPCVLTKEDYR-------TLGAMTE--G---YSGSDIAVVVKDALMQPIRKIQSATHFKDVSETRKLTPCSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDFG
[Model]
1ny6: CRYSTAL STRUCTURE OF SIGM54 ACTIVATOR (AAA+ ATPASE) IN THEACTIVE STATE Solved by: X-RAY, Resolution: 3.10A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
502-759
1ny6A
14%
>target
----------------------EINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTS--GKGSS----AVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAY-AHST--IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEE--
>1ny6A
EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGY-EKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFY--RLGGRKEIEVNVRILAATNRN-----IK-ELVKEGKFREDLYYRLGVIEIEIPPLRERKE-----DI-----------------IPLANHFLKKFSRKYAKEVEGFTKSAQELLLSY------------PWYGNVRELKNVIERAVLFS---EGKFIDRGELSCLV
[Model]
502-759
1ny6D
14%
>target
----------------------EINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTS--GKGSS----AVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAY-AHST--IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEE--
>1ny6D
EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGY-EKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFY--RLGGRKEIEVNVRILAATNRN-----IK-ELVKEGKFREDLYYRLGVIEIEIPPLRERKE-----DI-----------------IPLANHFLKKFSRKYAKEVEGFTKSAQELLLSY------------PWYGNVRELKNVIERAVLFS---EGKFIDRGELSCLV
[Model]
502-760
1ny6B
14%
>target
------------------EINILLCGDPGTSKSQLLQYVYNLVPRGQ--YT---SGKGSS---AVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAY-AHST--IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEA-
>1ny6B
ESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGY-EKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFY--RLGGRKEIEVNVRILAATNRN-----IK-ELVKEGKFREDLYYRLGVIEIEIPPLRERKE--------------------DI--IPLANHFLKKFSRKYAKEVEGFTKSAQELLLSY------------PWYGNVRELKNVIERAVLFS---EGKFIDRGELSCLV
[Model]
502-759
1ny6E
14%
>target
-----------------------EINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTS---GKGSS---AVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAH-ST--IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEE--
>1ny6E
EEYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGY-EKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFY--RLGGRKEIEVNVRILAATNRN-----IK-ELVKEGKFREDLYYRLGVIEIEIPPLR---ERK-----------------EDI--IPLANHFLKKFSRKYAKEVEGFTKSAQELLLSY------------PWYGNVRELKNVIERAVLF---SEGKFIDRGELSCLV
[Model]
502-759
1ny6G
14%
>target
-----------------------EINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTS---GKGSS---AVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAH-ST--IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEE--
>1ny6G
EEYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGY-EKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFY--RLGGRKEIEVNVRILAATNRN-----IK-ELVKEGKFREDLYYRLGVIEIEIPPLR---ERK-----------------EDI--IPLANHFLKKFSRKYAKEVEGFTKSAQELLLSY------------PWYGNVRELKNVIERAVLF---SEGKFIDRGELSCLV
[Model]
502-759
1ny6C
14%
>target
-----------------------EINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTS---GKGSS---AVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAH-ST--IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEE--
>1ny6C
EEYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGY-EKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFY--RLGGRKEIEVNVRILAATNRN-----IK-ELVKEGKFREDLYYRLGVIEIEIPPLR---ERK-----------------EDI--IPLANHFLKKFSRKYAKEVEGFTKSAQELLLSY------------PWYGNVRELKNVIERAVLF---SEGKFIDRGELSCLV
[Model]
502-759
1ny6F
14%
>target
-----------------------EINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTS---GKGSS---AVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAH-ST--IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEE--
>1ny6F
EEYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGY-EKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFY--RLGGRKEIEVNVRILAATNRN-----IK-ELVKEGKFREDLYYRLGVIEIEIPPLR---ERK-----------------EDI--IPLANHFLKKFSRKYAKEVEGFTKSAQELLLSY------------PWYGNVRELKNVIERAVLF---SEGKFIDRGELSCLV
[Model]
502-759
1ny6I
14%
>target
----------------------EINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTS--GKGSS----AVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAY-AHST--IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEE--
>1ny6I
EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGY-EKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFY--RLGGRKEIEVNVRILAATNRN-----IK-ELVKEGKFREDLYYRLGVIEIEIPPLRERKE-----DI-----------------IPLANHFLKKFSRKYAKEVEGFTKSAQELLLSY------------PWYGNVRELKNVIERAVLFS---EGKFIDRGELSCLV
[Model]
502-759
1ny6N
14%
>target
----------------------EINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTS--GKGSS----AVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAY-AHST--IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEE--
>1ny6N
EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGY-EKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFY--RLGGRKEIEVNVRILAATNRN-----IK-ELVKEGKFREDLYYRLGVIEIEIPPLRERKE-----DI-----------------IPLANHFLKKFSRKYAKEVEGFTKSAQELLLSY------------PWYGNVRELKNVIERAVLFS---EGKFIDRGELSCLV
[Model]
502-759
1ny6J
14%
>target
----------------------EINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTS--GKGSS----AVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAY-AHST--IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEE--
>1ny6J
EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGY-EKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFY--RLGGRKEIEVNVRILAATNRN-----IK-ELVKEGKFREDLYYRLGVIEIEIPPLRERKE-----DI-----------------IPLANHFLKKFSRKYAKEVEGFTKSAQELLLSY------------PWYGNVRELKNVIERAVLFS---EGKFIDRGELSCLV
[Model]
502-759
1ny6M
14%
>target
----------------------EINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTS--GKGSS----AVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAY-AHST--IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEE--
>1ny6M
EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGY-EKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFY--RLGGRKEIEVNVRILAATNRN-----IK-ELVKEGKFREDLYYRLGVIEIEIPPLRERKE-----DI-----------------IPLANHFLKKFSRKYAKEVEGFTKSAQELLLSY------------PWYGNVRELKNVIERAVLFS---EGKFIDRGELSCLV
[Model]
502-759
1ny6K
14%
>target
-----------------------EINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTS---GKGSS---AVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAH-ST--IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEE--
>1ny6K
EEYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGY-EKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFY--RLGGRKEIEVNVRILAATNRN-----IK-ELVKEGKFREDLYYRLGVIEIEIPPLR---ERK-----------------EDI--IPLANHFLKKFSRKYAKEVEGFTKSAQELLLSY------------PWYGNVRELKNVIERAVLF---SEGKFIDRGELSCLV
[Model]
501-757
1ny6L
14%
>target
---------------------AEINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTSGKGSSAVGLTAYV--------MKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYA-HST--IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDV---
>1ny6L
EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALN---VASIPRDIFEAELFGYEKGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFY--RLGGRKEIEVNVRILAATNR-----NIKE-LVKEGKFREDLYYRLGVIEIEIPPLRERKE--------------------DI--IPLANHFLKKFSRKYAKEVEGFTKSAQELLLSY------------PWYGNVRELKNVIERAVLFSE---GKFIDRGELSCL
[Model]
501-757
1ny6H
14%
>target
---------------------AEINILLCGDPGTSKSQLLQYVYNLVPRG--QYT--SGKGSS----AVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYA-HST--IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDV--
>1ny6H
EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGYE-KGAFTGAVSSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYR--LGGRKEIEVNVRILAATNRNIKELV------KEGKFREDLYYRLGVIEIEIPPLRERKE-DI---------------------IPLANHFLKKFSRKYAKEVEGFTKSAQELLLSY------------PWYGNVRELKNVIERAVLFSE---GKFIDRGELSC
[Model]
3syk: CRYSTAL STRUCTURE OF THE AAA+ PROTEIN CBBX, SELENOMETHIONI Solved by: X-RAY, Resolution: 3.08A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
465-719
3sykA
14%
>target
----------------------------LAPSIYEHEDIKKGILL-QLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSG-KG--SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRS------VLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKI---------------------------------------------------
>3sykA
MTDAATAPTSIDLRAEYEGSGAKEVLEELDRELIGLKPVKDRIRETAALLLVERARQKLGLAHETPTLHMSFTGNPGTGKTTVALKMAGLLHRLGYVRKGHLVSVTRDDLVGQYIGH--T--APKTKEVLKRAMGGVLFIDEAYYLYRPDDYGQEAIEILLQVMEN-------------NRDDLVVILAGYAD--------RMENFFQSNPGFRSRIAHHIEFPDY-SDEELFEIAGHML---------------------------DD-QNYQMTPEAETALRAYIGLRRNQPHFANARSIRNALDRARLRQANRLFTAPLDARALSTIAEEDIRASRVFKGG
[Model]
463-651
3sykB
13%
>target
------------------SALAPSIYEHEDIKKGILLQLFGG--TRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQ-LVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLD---------------------------------------------------------------------------------------------
>3sykB
TSIDLRAEYEGSGAKEVLEELDRELIGLKPVKDRIRE-TAALLLVERARQ---KLGLTPTLHMSFTGNPGTGKTTVALKMAGLLHRLGYVRKGHLVSVTRDDLVGQY--IGHTAPKTKEVLKRAMGGVLFIDEAYYLYRPDNERDYGQEAIEILL--QVM--ENNRDDLVVILAGYAD--------RMENFFQSNPGFRSRIAHHIEFPDYSDEELFEIAGHMLDDQNYQMTPEAETALRAYIGLRRNQPHFANARSIRNALDRARLRQANRLFTASSGPLDARALSTIAEEDIRASRVFKGG
[Model]
1qvr: CRYSTAL STRUCTURE ANALYSIS OF CLPB Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
458-753
1qvrC
13%
>target
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YERLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRG--QYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANP----------IESQWNPKKT-TIE--NIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEA-YVNMRKIGSSRGMVSAYPRQLESLI--RLAEAHAKVRFSNKVE--------------------
>1qvrC
ERWTQAAREALAQAQVLAQRMKHQAIDLPHLWAVLLKDERSLAWRLLEKAGADPKALKELQERELARLPKVEGAEVGQYLTSRLSGALNRAEGLMEELKDRYVAVDTLVLALAEATPGLPGLEALKGALKELRGGRTVQTEHAESTYNALEQYGIDLTRLAAEGKLDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMEFEERLKAVIQEVVQSQGEVILFIDELKPALARGELRLIGATTLDEYREIEKDPALERRFQPVYVDEPTVEETISILRGLKEKYEVHHGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEAAARLRMALESAPEEIDALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWEREREILRKLREAQHRLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVEALSEKLRGARFVRLEVTEEDIAEIVSRWTGIPVSKLLEGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAG-LKDPN----RPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTE------YM--EKHAVSRLQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHG-RTVDF-RNTVIILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVF-RPLTKEQIRQIVEIQLS-----------------YLRAR--LAEKRISLELTEAAKDFLAERGYD-P----------VFGARPLRRVIQRELETPLAQKILAGEVKEGDRVQVDVGPAGLVFAVPA
[Model]
458-753
1qvrB
13%
>target
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YERLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRG--QYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANP----------IESQWNPKKT-TIE--NIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEA-YVNMRKIGSSRGMVSAYPRQLESLI--RLAEAHAKVRFSNKVE--------------------
>1qvrB
ERWTQAAREALAQAQVLAQRMKHQAIDLPHLWAVLLKDERSLAWRLLEKAGADPKALKELQERELARLPKVEGAEVGQYLTSRLSGALNRAEGLMEELKDRYVAVDTLVLALAEATPGLPGLEALKGALKELRGGRTVQTEHAESTYNALEQYGIDLTRLAAEGKLDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMEFEERLKAVIQEVVQSQGEVILFIDELKPALARGELRLIGATTLDEYREIEKDPALERRFQPVYVDEPTVEETISILRGLKEKYEVHHGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEAAARLRMALESAPEEIDALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWEREREILRKLREAQHRLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVEALSEKLRGARFVRLEVTEEDIAEIVSRWTGIPVSKLLEGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAG-LKDPN----RPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTE------YM--EKHAVSRLQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHG-RTVDF-RNTVIILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVF-RPLTKEQIRQIVEIQLS-----------------YLRAR--LAEKRISLELTEAAKDFLAERGYD-P----------VFGARPLRRVIQRELETPLAQKILAGEVKEGDRVQVDVGPAGLVFAVPA
[Model]
458-753
1qvrA
13%
>target
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YERLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRG--QYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANP----------IESQWNPKKT-TIE--NIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEA-YVNMRKIGSSRGMVSAYPRQLESLI--RLAEAHAKVRFSNKVE--------------------
>1qvrA
ERWTQAAREALAQAQVLAQRMKHQAIDLPHLWAVLLKDERSLAWRLLEKAGADPKALKELQERELARLPKVEGAEVGQYLTSRLSGALNRAEGLMEELKDRYVAVDTLVLALAEATPGLPGLEALKGALKELRGGRTVQTEHAESTYNALEQYGIDLTRLAAEGKLDPVIGRDEEIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMEFEERLKAVIQEVVQSQGEVILFIDELKPALARGELRLIGATTLDEYREIEKDPALERRFQPVYVDEPTVEETISILRGLKEKYEVHHGVRISDSAIIAAATLSHRYITERRLPDKAIDLIDEAAARLRMALESAPEEIDALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAEWEREREILRKLREAQHRLDEVRREIELAERQYDLNRAAELRYGELPKLEAEVEALSEKLRGARFVRLEVTEEDIAEIVSRWTGIPVSKLLEGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAG-LKDPN----RPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTE------YM--EKHAVSRLQLTEAVRRRPYSVILFDEIEKAHPDVFNILLQILDDGRLTDSHG-RTVDF-RNTVIILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVF-RPLTKEQIRQIVEIQLS-----------------YLRAR--LAEKRISLELTEAAKDFLAERGYD-P----------VFGARPLRRVIQRELETPLAQKILAGEVKEGDRVQVDVGPAGLVFAVPA
[Model]
3pfi: 2.7 ANGSTROM RESOLUTION CRYSTAL STRUCTURE OF A PROBABLE HOJUNCTION DNA HELICASE (RUVB) FROM CAMPYLOBACTER JEJUNI SUNCTC 11168 IN COMPLEX WITH ADENOSINE-5'-DIPHOSPHATE Solved by: X-RAY, Resolution: 2.69A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-765
3pfiA
14%
>target
-------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRG-QYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIA-YAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHR-----------------------------------------------------------------------------
>3pfiA
LRPSNFDGYIGQESIKKNLNVFIAAAKK----RNE-----CLDHILFSGPAGLGKTTLANIISYEMSANIKTTAAPMI----------EK--SGD--LAAILTNLSEGDILFIDEIHRLSPAIEEVLYPAMEDYRLAQ----TIKIDLPKFTLIGATTRA-------------GMLSNPLRDRFGMQFRL-EFYKDS----------------------------ELALILQKAALK-LNKTCEEKAALEIAKRS-------R------STPRIALRLLKRVRDFADVNDEEIITEKRANEALNSLGVNELGFDAMDLRYLELLTAAKQKPIGLASIAAALSEDENTIEDVIEPYLLANGYIERTAKGRIASAKSYSALKLNYE
[Model]
468-765
3pfiB
13%
>target
----SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRA--EINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHR------------------------------------------------------------------------
>3pfiB
SNFDGYIGQESIKKNLNVFIAAA--K---------KRNECLDHILFSGPAGLGKTTLANIISYEMSANIKTTAAPMI----------EKS--GDL--AAILTNLSEGDILFIDEIHRLSPAIEEVLYPAMEDYP--------------KFTLIGATTR-------------AGMLSNPLRDRFGMQFRL-EFYKDSELALILQKAA---------------------------LK-LNKTCEEKAALEIAKR-------SR------STPRIALRLLKRVRDFADVNDEEIITEKRANEALNSLGVNELGFDAMDLRYLELLTAAKQKPIGLASIAAALSEDENTIEDVIEPYLLANGYIERTAKGRIASAKSYSAL
[Model]
1jbk: CRYSTAL STRUCTURE OF THE FIRST NUCELOTIDE BINDING DOMAIN OCLPB Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
456-659
1jbkA
13%
>target
----------DIYERLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLV----------PRGQYTSGKGSSAVGLTAYVMKDPETRQL---VLQTGALVL--SDNGICCIDEFDKM--NESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDR----
>1jbkA
HMQALKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRR--------------TKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLA----LDMGALVAGA-KY--RGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAMDAGNMLKPALARGEL---------------HCVGATTLDE--YR------QYIEKDAALERRFQKVF--VAEPSVEDTIAILR
[Model]
1ksf: CRYSTAL STRUCTURE OF CLPA, AN HSP100 CHAPERONE AND REGULATOR OF CLPAP PROTEASE: STRUCTURAL BASIS OF DIFFERENCES IN FUNCTION OF THE TWO AAA+ ATPASE DOMAINS Solved by: X-RAY, Resolution: 2.60A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
464-754
1ksfX
13%
>target
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-------YTSGKGSSAVGLTA----YVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIEN--IQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIR--LAEAHAKVRFSNKVEA----------------------------
>1ksfX
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRLENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMARAG-LGHE----HKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHT--VSRLIGAPPGYVGFDQ-GGLL---TDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNN-GRKADF-RNVVLVMTTNA-GVRNST--DAMEEIKKIFTPEFRNRLDNIIW-FDHLSTDVIHQVVDKFIV-----------------ELQVQ--LDQKGVSLEVSQEARNWLAEKGYDR----------AMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAE
[Model]
503-772
1ksfX
13%
>target
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------INILLCGDPGTSKSQLLQYVYN-LVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQ---TGALVL-SDNGICCIDEFDKMN--------ESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIM-PRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLI---------------RLAEAHAKVRFSNKVEAIDVEEAKRLHREALKQSA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>1ksfX
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRLENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGA-GTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLL------SSG--------KIRVIGSTTYQE--------FSNIFEKDRALARRFQKI--DITEPSIEETVQIINGLKPKYEAH----HDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQD--KAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKNELTYGFQSAQKHKAE
[Model]
1in4: THERMOTOGA MARITIMA RUVB HOLLIDAY JUNCTION BRANCH MIGRATIOMOTOR Solved by: X-RAY, Resolution: 1.60A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-765
1in4A
13%
>target
---------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYT-SGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHR------------------------------------------------------------------------------
>1in4A
QFLRPKSLDEFIGQENVKKKLSLALEAAKMR----G-----EVLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVLVKQGDMAAIL--------------TSLERGDVLFIDEIHRLNKAVEELLYSAIEDFQIDIQ----------PFTLVGATTRS-------------GLLSSPLRSRFGIILEL-DFYTVKELKEIIKRAA---------------------------SL-MDVEIEDAAAEMIAKRS-------R------GTPRIAIRLTKRVRDMLTVVKADRINTDIVLKTMEVLNIDDEGLDEFDRKILKTIIEIYRGGPVGLNALAASLGVEADTLSEVYEPYLLQAGFLARTPRGRIVTEKAYKHLKYEVP
[Model]
3k1j: CRYSTAL STRUCTURE OF LON PROTEASE FROM THERMOCOCCUS ONNURI Solved by: X-RAY, Resolution: 2.00A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-766
3k1jB
13%
>target
----------------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSG----------------------------------------------------------KGSSAVGLTAYVMKDPE--TRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQ--------LNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLM---LDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYA-HSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHRE----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3k1jB
SLELGIEFTTTEEIEVPEKLIDQVIGQEHAVEVIKTAANQ----------------KRHVLLIGEPGTGKSMLGQAMAELLPTETLEDILVFPNPEDENMPRIKTVPACQGRRIVEKYREKAKSQTVLVPKLLVDNCGRTKAPFIDATGAHAGALLGDVRHDPFGTPAHERVEPGMIHRAHKGVLFIDEIATLSLKMQQSLLTAMQEKKFPITGQSEMSSGAMVRTEPVPCDFVLVAAGNLDTV-----------DKMHPALRSRIRGYGYEVYMRTTMPDTIEN----------------------RRKLVQFVAQEVKRDGKIPHFTKEAVEEIVREAQKR---AGRKGHLTLRLRDLGGIVRAAGDIAVKKGKKYVEREDVIEAVKMAKPLEKQLADWYIERKKEYQVIKTEGSEIGRVNGLAVIGEQSGIVLPIEAVVAPAASKEEGKIIVTGKLGEIAKEAVQNVSAIIKRYKGEDISRYDIHVQFLQTYEGVEGDAASISVATAVISALEGIPIRQDVAMTGSLSVRGEVLPIGGATPAIEAAIEAGIKMVIIPKSNEKDVFLSKDKAEKIQIFPVETIDEVLEIALEESEKKRELLRRIRETLPLS
[Model]
466-766
3k1jA
13%
>target
----------------------APSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ--------------------YTSGK---------------------------------------GSSAVGLTAYVMKDPET---RQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQ--------LNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLM---LDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYA-HSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHRE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>3k1jA
GESLELGIEFTTTEEIEVPEKLIDQVIGQEHAVEVIKTAANQK----------------RHVLLIGEPGTGKSMLGQAMAELLPTETLEDILVFPNPEDENMPRIKTVPACQGRRIVEKYREKAKSQESVLVPKLLVDNCGRTKAPFIDATGAHAGALLGDVRHDPFLGTPAHERVEPGMIHRAHKGVLFIDEIATLSLKMQQSLLTAMQEKKFPITGQSEMSSGAMVRTEPVPCDFVLVAAGNLDT-----------VDKMHPALRSRIRGYGYEVYMRTTMPDTIEN----------------------RRKLVQFVAQEVKRDGKIPHFTKEAVEEIVREAQKRA---GRKGHLTLRLRDLGGIVRAAGDIAVKKGKKYVEREDVIEAVKMAKPLEKQLADWYIERKKEYQVIKTEGSEIGRVNGLAVIGEQSGIVLPIEAVVAPAASKEEGKIIVTGKLGEIAKEAVQNVSAIIKRYKGEDISRYDIHVQFLQTYEGVEGDAASISVATAVISALEGIPIRQDVAMTGSLSVRGEVLPIGGATPAIEAAIEAGIKMVIIPKSNEKDVFLSKDKAEKIQIFPVETIDEVLEIALEESEKKRELLRRIRETLPLSL
[Model]
1in5: THERMOGOTA MARITIMA RUVB A156S MUTANT Solved by: X-RAY, Resolution: 2.00A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-765
1in5A
13%
>target
---------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTS-GKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHR------------------------------------------------------------------------------
>1in5A
QFLRPKSLDEFIGQENVKKKLSLALEAA-KM---RG-----EVLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVLVKQGDMAAILT--------------SLERGDVLFIDEIHRLNKAVEELLYSAIEDFQIDIMD-------IQPFTLVGSTTRSG-------------LLSSPLRSRFGIIL-ELDFYTVKELKEIIKRAASL----------------------------MDVEIEDAAAEMIAKR-------SR------GTPRIAIRLTKRVRDMLTVVKADRINTDIVLKTMEVLNIDDEGLDEFDRKILKTIIEIYRGGPVGLNALAASLGVEADTLSEVYEPYLLQAGFLARTPRGRIVTEKAYKHLKYEVP
[Model]
1in7: THERMOTOGA MARITIMA RUVB R170A Solved by: X-RAY, Resolution: 1.90A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-764
1in7A
13%
>target
---------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLH-------------------------------------------------------------------------------
>1in7A
QFLRPKSLDEFIGQENVKKKLSLALEAAKMR----G-----EVLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVLVKQGDMAAIL--------------TSLERGDVLFIDEIHRLNKAVEELLYSAIEDFQIDIQ----------PFTLVGATTRSG-------------LLSSPLRSAFGIILEL-DFYTVKELKEIIKRA---------------------------ASL-MDVEIEDAAAEMIAKRS-------R------GTPRIAIRLTKRVRDMLTVVKADRINTDIVLKTMEVLNIDDEGLDEFDRKILKTIIEIYRGGPVGLNALAASLGVEADTLSEVYEPYLLQAGFLARTPRGRIVTEKAYKHLKYEVP
[Model]
3m0e: CRYSTAL STRUCTURE OF THE ATP-BOUND STATE OF WALKER B MUTANATPASE DOMAIN Solved by: X-RAY, Resolution: 2.63A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
502-759
3m0eG
13%
>target
----------------------EINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTSGK--GSSA----VGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIA-YAHST--IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEE--
>3m0eG
EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGY-EKGAFTGAVSSKEGFFELADGGTLFLDAIGELSLEAQAKLLRVIESGKFY--RLGGRKEIEVNVRILAATNRN-----IK-ELVKEGKFREDLYYRLGVIEIEIPPLRERKE-----DI-----------------IPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYP------------WYGNVRELKNVIERAVLFS---EGKFIDRGELSCLV
[Model]
502-759
3m0eC
13%
>target
----------------------EINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTSGK--GSSA----VGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIA-YAHST--IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEE--
>3m0eC
EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGY-EKGAFTGAVSSKEGFFELADGGTLFLDAIGELSLEAQAKLLRVIESGKFY--RLGGRKEIEVNVRILAATNRN-----IK-ELVKEGKFREDLYYRLGVIEIEIPPLRERKE-----DI-----------------IPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYP------------WYGNVRELKNVIERAVLFS---EGKFIDRGELSCLV
[Model]
502-759
3m0eF
13%
>target
----------------------EINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTSGK--GSSA----VGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIA-YAHST--IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEE--
>3m0eF
EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGY-EKGAFTGAVSSKEGFFELADGGTLFLDAIGELSLEAQAKLLRVIESGKFY--RLGGRKEIEVNVRILAATNRN-----IK-ELVKEGKFREDLYYRLGVIEIEIPPLRERKE-----DI-----------------IPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYP------------WYGNVRELKNVIERAVLFS---EGKFIDRGELSCLV
[Model]
502-759
3m0eB
13%
>target
----------------------EINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTSGK--GSSA----VGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIA-YAHST--IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEE--
>3m0eB
EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGY-EKGAFTGAVSSKEGFFELADGGTLFLDAIGELSLEAQAKLLRVIESGKFY--RLGGRKEIEVNVRILAATNRN-----IK-ELVKEGKFREDLYYRLGVIEIEIPPLRERKE-----DI-----------------IPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYP------------WYGNVRELKNVIERAVLFS---EGKFIDRGELSCLV
[Model]
502-759
3m0eE
13%
>target
----------------------EINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTSGK--GSSA----VGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIA-YAHST--IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEE--
>3m0eE
EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGY-EKGAFTGAVSSKEGFFELADGGTLFLDAIGELSLEAQAKLLRVIESGKFY--RLGGRKEIEVNVRILAATNRN-----IK-ELVKEGKFREDLYYRLGVIEIEIPPLRERKE-----DI-----------------IPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYP------------WYGNVRELKNVIERAVLFS---EGKFIDRGELSCLV
[Model]
502-759
3m0eA
13%
>target
----------------------EINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTSGK--GSSA----VGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIA-YAHST--IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEE--
>3m0eA
EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGY-EKGAFTGAVSSKEGFFELADGGTLFLDAIGELSLEAQAKLLRVIESGKFY--RLGGRKEIEVNVRILAATNRN-----IK-ELVKEGKFREDLYYRLGVIEIEIPPLRERKE-----DI-----------------IPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYP------------WYGNVRELKNVIERAVLFS---EGKFIDRGELSCLV
[Model]
502-759
3m0eD
13%
>target
----------------------EINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTSGK--GSSA----VGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIA-YAHST--IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEE--
>3m0eD
EYVFESPKMKEILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALNVASIPRDIFEAELFGY-EKGAFTGAVSSKEGFFELADGGTLFLDAIGELSLEAQAKLLRVIESGKFY--RLGGRKEIEVNVRILAATNRN-----IK-ELVKEGKFREDLYYRLGVIEIEIPPLRERKE-----DI-----------------IPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYP------------WYGNVRELKNVIERAVLFS---EGKFIDRGELSCLV
[Model]
3r8f: PROTEIN-DNA COMPLEX Solved by: X-RAY, Resolution: 3.37A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
504-752
3r8fB
13%
>target
-------------------------------------NILLCGDPGTSKSQLLQYVYNLV----PRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNEST--RSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKV-------------------------------------------------------------------------------------------------
>3r8fB
DFLNPKYTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFAQA-MVEH-LK---KGT--INEFRNMYKSVDLLLLDDVQFLSGKERTQIEFFHIFNT----LYL-------LEKQIILASDRHPQ----------KLDGVSDRLVSRFEGGILVEIELDNKTRFKI------------------------IKE---KLKE-FNLELRKEVIDYLLENT--------------KNVREIEGKIKLIKLKGFEGLERKERKERDKLMQIVEFVANYYAVKVEDILSDKNKRTSEARKIAMYLCRKVCSASLIEIARAFKRKDHTTVIHAIRSVEEEKRKFKHLVGFLEKQAFDKIC
[Model]
504-752
3r8fA
13%
>target
-------------------------------------NILLCGDPGTSKSQLLQYVYNLV----PRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNEST--RSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKV-------------------------------------------------------------------------------------------------
>3r8fA
DFLNPKYTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFAQA-MVEH-LK---KGT--INEFRNMYKSVDLLLLDDVQFLSGKERTQIEFFHIFNT----LYL-------LEKQIILASDRHPQ----------KLDGVSDRLVSRFEGGILVEIELDNKTRFKI------------------------IKE---KLKE-FNLELRKEVIDYLLENT--------------KNVREIEGKIKLIKLKGFEGLERKERKERDKLMQIVEFVANYYAVKVEDILSDKNKRTSEARKIAMYLCRKVCSASLIEIARAFKRKDHTTVIHAIRSVEEEKRKFKHLVGFLEKQAFDKIC
[Model]
504-752
3r8fD
13%
>target
-------------------------------------NILLCGDPGTSKSQLLQYVYNLV----PRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNEST--RSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKV-------------------------------------------------------------------------------------------------
>3r8fD
DFLNPKYTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFAQA-MVEH-LK---KGT--INEFRNMYKSVDLLLLDDVQFLSGKERTQIEFFHIFNT----LYL-------LEKQIILASDRHPQ----------KLDGVSDRLVSRFEGGILVEIELDNKTRFKI------------------------IKE---KLKE-FNLELRKEVIDYLLENT--------------KNVREIEGKIKLIKLKGFEGLERKERKERDKLMQIVEFVANYYAVKVEDILSDKNKRTSEARKIAMYLCRKVCSASLIEIARAFKRKDHTTVIHAIRSVEEEKRKFKHLVGFLEKQAFDKIC
[Model]
504-752
3r8fC
13%
>target
-------------------------------------NILLCGDPGTSKSQLLQYVYNLV----PRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNEST--RSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKV-------------------------------------------------------------------------------------------------
>3r8fC
DFLNPKYTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFAQA-MVEH-LK---KGT--INEFRNMYKSVDLLLLDDVQFLSGKERTQIEFFHIFNT----LYL-------LEKQIILASDRHPQ----------KLDGVSDRLVSRFEGGILVEIELDNKTRFKI------------------------IKE---KLKE-FNLELRKEVIDYLLENT--------------KNVREIEGKIKLIKLKGFEGLERKERKERDKLMQIVEFVANYYAVKVEDILSDKNKRTSEARKIAMYLCRKVCSASLIEIARAFKRKDHTTVIHAIRSVEEEKRKFKHLVGFLEKQAFDKIC
[Model]
2p65: CRYSTAL STRUCTURE OF THE FIRST NUCLEOTIDE BINDING DOMAIN OCHAPERONE CLPB1, PUTATIVE, (PV089580) FROM PLASMODIUM VIV Solved by: X-RAY, Resolution: 1.70A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
467-653
2p65A
13%
>target
-------------------PSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVP-RGQYTSGKG-----SSAVGLTAYVMKDPETRQLV--LQTG--ALVLSDN-GICCIDEFDKMNESTR---------SVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQ-
>2p65A
QALEKYSRDLTALARAGKLDPVIGRDTEIRRAIQILSR--------------RTKNNPILLGDPGVGKTAIVEGLAIKIVQGDVPDSLKGRKLVSLDLSSLIAGAK---YRGDFEERLKSILKEVQDAEGQVVMFIDEIHTVVGAGAVAEGALDAGNILKPMLAR---------------GELRCIGATTVSE--------YRQFIEKDKALERRFQQIL--VEQPS
[Model]
3sc3: CRYSTAL STRUCTURE OF A PUTATIVE DNA REPLICATION REGULATOR (SAMA_1916) FROM SHEWANELLA AMAZONENSIS SB2B AT 3.00 A RE Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
503-763
3sc3A
11%
>target
----------------------INILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAY-VMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTR--SVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIF-LMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRL
>3sc3A
YPAAGNDELIGALKSAASGDGVQAIYLWGPVKSGRTHLIHAACARANEL-----------ERRSFYIPLGI-H-ASISTALLEGLEQFDLICIDDVDAVAGHPLWEEAIFDLYNRVA----E-------QKRGSLIVSASASPMEAG---------FVLPDLVSRMHWGLTYQLQPMMDDEKLAA------------------------LQRR---AA-MRGLQLPEDVGRFLLNRM-------------ARDLRTLFDVLDRLDKASMVH-QRKLTIPFVKEMLRL
[Model]
502-763
3sc3B
13%
>target
--------------------EINILLCGDPGTSKSQLLQYVYNLVPRG---Q-YTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSV------LHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIF-LMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRL
>3sc3B
PAAGNDELIGALKSAASGDGVQAIYLWGPVKSGRTHLIHAACARANELERRSFYIPL-GIHA-----S------ISTALLE----GLEQFDLICIDDVDAVAGHPLWEEAIFDLYNRVAEQKR---------------GSLIVSASASPMEAG---------FVLPDLVSRMHWGLTYQLQPMMDDEKLAA------------------------LQRR---AA-MRGLQLPEDVGRFLLNRM-------A--R----DLRTLFDVLDRLDKASMVH-QRKLTIPFVKEMLRL
[Model]
1in8: THERMOTOGA MARITIMA RUVB T158V Solved by: X-RAY, Resolution: 1.90A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-765
1in8A
13%
>target
---------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHR------------------------------------------------------------------------------
>1in8A
QFLRPKSLDEFIGQENVKKKLSLALEAAKMR----G-----EVLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVLVKQGDMAAILT--------------SLERGDVLFIDEIHRLNKAVEELLYSAIEDFQIDIQ----------PFTLVGATVRS-------------GLLSSPLRSRFGIILEL-DFYTVKELKEIIKRA---------------------------ASL-MDVEIEDAAAEMIAKRS-------R------GTPRIAIRLTKRVRDMLTVVKADRINTDIVLKTMEVLNIDDEGLDEFDRKILKTIIEIYRGGPVGLNALAASLGVEADTLSEVYEPYLLQAGFLARTPRGRIVTEKAYKHLKYEVP
[Model]
1g4a: CRYSTAL STRUCTURES OF THE HSLVU PEPTIDASE-ATPASE COMPLEX REVEAL AN ATP-DEPENDENT PROTEOLYSIS MECHANISM Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
464-717
1g4aE
13%
>target
-----------ALAPSIYEHEDIKKGILLQLFGGTRKD-FSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPET-------------------------------------RQLVLQTGALVL-------------SDNGICCIDEFDKM------------NESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIA-YAHSTIMPRLSEEASQALIEAYVNMR-----------------------------------------------------------
>1g4aE
MSEMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTP-KNILMIGPTGVGKTEIARRLAKLANAP-FIKVEATKFTE-VGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNRYRAEELAEERILDAMKLLIEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREGVQRDLLPLVEGCTVST-KHGMVKTD--HILFIASGA-----FQIA----KPSDLIPELQGRLPIRVEL-QALTTSDFERILTEPNA----------------SITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGARRLHTVLERLMEEISYDASDLSGQNITIDADYVSKHLDALVADEDLSRFIL
[Model]
464-717
1g4aF
13%
>target
-----------ALAPSIYEHEDIKKGILLQLFGGTRKD-FSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPET-------------------------------------RQLVLQTGALVL-------------SDNGICCIDEFDKM------------NESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIA-YAHSTIMPRLSEEASQALIEAYVNMR-----------------------------------------------------------
>1g4aF
MSEMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTP-KNILMIGPTGVGKTEIARRLAKLANAP-FIKVEATKFTE-VGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNRYRAEELAEERILDAMKLLIEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREGVQRDLLPLVEGCTVST-KHGMVKTD--HILFIASGA-----FQIA----KPSDLIPELQGRLPIRVEL-QALTTSDFERILTEPNA----------------SITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGARRLHTVLERLMEEISYDASDLSGQNITIDADYVSKHLDALVADEDLSRFIL
[Model]
1j7k: THERMOTOGA MARITIMA RUVB P216G MUTANT Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-764
1j7kA
13%
>target
-------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAE--INILLCGDPGTSKSQLLQYVYNLVPRGQYTS-GKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLH-------------------------------------------------------------------------------
>1j7kA
LRPKSLDEFIGQENVKKKLSLALEAA-K----------MRGEVLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTSGPVLVKQGDMAAILT--------------SLERGDVLFIDEIHRLNKAVEELLYSAIEDFQIDIIDIQ-------PFTLVGATTRS-------------GLLSSPLRSRFGIILE-LDFYTVKELKEIIKRAA---------------------------SL-MDVEIEDAAAEMIAKRS-------R------GTGRIAIRLTKRVRDMLTVVKADRINTDIVLKTMEVLNIDDEGLDEFDRKILKTIIEIYRGGPVGLNALAASLGVEADTLSEVYEPYLLQAGFLARTPRGRIVTEKAYKHLKYEVP
[Model]
1g41: CRYSTAL STRUCTURE OF HSLU HAEMOPHILUS INFLUENZAE Solved by: X-RAY, Resolution: 2.30A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
467-737
1g41A
12%
>target
-------------PSIYEHEDIKKGILLQLF---GGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKGSSAVGLTAYVMK-----------D---------PETRQLVL------QTGALVLSDNGICCIDEFDKMNES------------TRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYA-HSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLI--------------------------------------------
>1g41A
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQ--EPLR-HEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTVGKEVDSIIRDLTDSAMKLVRQQEIAKNRLIDDEAAKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVSTKH-GMVKT--DHILFIASGA-----FQVAR----PSDLIPELQGRLPIRVELT-ALSAADFERILTEP----------------HASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKT-----ENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
2hcb: STRUCTURE OF AMPPCP-BOUND DNAA FROM AQUIFEX AEOLICUS Solved by: X-RAY, Resolution: 3.51A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
504-749
2hcbD
12%
>target
-------------------------------------NILLCGDPGTSKSQLLQYVYNLV----PRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNEST--RSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFS-----------------------------------------------------------------------------------------------------
>2hcbD
DFLNPKYTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFAQ-AMVEHL-KKGTINEF-----RNMYKSVDLLLLDDVQFLSGKERTQIEFFHIFNTL----YL-------LEKQIILASDRHP----------QKLDGVSDRLVSRFEGGILVEIELDNKTRFKI------------------------IKEK---LKE-FNLELRKEVIDYLLENT-------------K-NVREIEGKIKLIKLKGFEGLERKERKERDKLMQIVEFVANYYAVKVEDILSDKNKRTSEARKIAMYLCRKVCSASLIEIARAFKRKDHTTVIHAIRSVEEEKKRKFKHLVGFLEKQAFDKIC
[Model]
504-749
2hcbC
13%
>target
-------------------------------------NILLCGDPGTSKSQLLQYVYNLVP----RGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMN--ESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDL--IFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFS--------------------------------------------------------------------------------------------------
>2hcbC
DFLNPKYTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFAQA-MVEHL-KKGTINEF---RNM--YKSVDLLLLDDVQFLSGKERTQIEFFHIFNTL----YLL-------EKQIILASDRHP----------QKLDGVSDRLVSRFEGGILVEI--ELDNKTRFKI------------------------IKEK---LKE-FNLELRKEVIDYLLENT-------------K-NVREIEGKIKLIKLKGFEGLERKERKERDKLMQIVEFVANYYAVKVEDILSDKNKRTSEARKIAMYLCRKVCSASLIEIARAFDHTTVIHAIRSVEEEKKRKFKHLVGFLEKQAFDKIC
[Model]
504-749
2hcbA
12%
>target
-------------------------------------NILLCGDPGTSKSQLLQYVYNLVP----RGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNEST--RSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDL--IFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFS--------------------------------------------------------------------------------------------------
>2hcbA
DFLNPKYTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFA-QAMVEHL-KK---G--TINEFRNMYKSVDLLLLDDVQFLSGKERTQIEFFHIFNT----LYLL-------EKQIILASDRHPQ----------KLDGVSDRLVSRFEGGILVEI--ELDNKTRFK------------------------IIKEK---LKE-FNLELRKEVIDYLLENT--------------KNVREIEGKIKLIKLKGFEGLERKERKERDKLMQIVEFVANYYAVKVEDILSDKRRTSEARKIAMYLCRKVCSASLIEIARAFKDHTTVIHAIRSVEEEKKRKFKHLVGFLEKQAFDKIC
[Model]
504-750
2hcbB
12%
>target
-------------------------------------NILLCGDPGTSKSQLLQYVYNLVP----RGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNEST--RSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDL--IFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSN--------------------------------------------------------------------------------------------------
>2hcbB
DFLNPKYTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFAQ-AMVEHLKKG-TINEF---RNMY--KSVDLLLLDDVQFLSGKERTQIEFFHIFNTL----YLL-------EKQIILASDRHPQ-KL---------DGVSDRLVSRFEGGILVEI-E-LDNKTRFKI------------------------IKEK---LKE-FNLELRKEVIDYLLENT--------------KNVREIEGKIKLIKLKGFEGLERKERKERDKLMQIVEFVANYYAVKVEDILSDKNKRTSEARKIAMYLCRKVCSASLIEIARAFKDHTTVIHAIRSVEEEKKRKFKHLVGFLEKQAFDKIC
[Model]
2z4r: CRYSTAL STRUCTURE OF DOMAIN III FROM THE THERMOTOGA MARITIMA REPLICATION INITIATION PROTEIN DNAA Solved by: X-RAY, Resolution: 3.05A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
503-762
2z4rA
12%
>target
-----------------------------------INILLCGDPGTSKSQLLQYVYNLVP-----R-GQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTS-VLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLM-LDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKR-----
>2z4rA
TPLNPDYTFENFVVGPGNSFAYHAALEVAKHPGRYNPLFIYGGVGLGKTHLLQSIGNYVVQNEPDLRVMYITSEKFLNDLVD--SMKE----GKLNEFREKYRKKVDILLIDDVQFLIGKTGVQTELFHTFNEL----------HDSGKQIVICSDREPQ-KL---------SEFQDRLVSRFQMGLVAKLEPPDEETR------------------------KSIARKM---LEI-EHGELPEEVLNFVAENV-------D------DNLRRLRGAIIKLLVYKETTGK-EVDLKEAILLLKDFIKP
[Model]
503-762
2z4rB
12%
>target
-----------------------------------INILLCGDPGTSKSQLLQYVYNLVP-----R-GQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTS-VLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLM-LDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKR-----
>2z4rB
TPLNPDYTFENFVVGPGNSFAYHAALEVAKHPGRYNPLFIYGGVGLGKTHLLQSIGNYVVQNEPDLRVMYITSEKFLNDLVD--SMKE----GKLNEFREKYRKKVDILLIDDVQFLIGKTGVQTELFHTFNEL----------HDSGKQIVICSDREPQ-KL---------SEFQDRLVSRFQMGLVAKLEPPDEETR------------------------KSIARKM---LEI-EHGELPEEVLNFVAENV-------D------DNLRRLRGAIIKLLVYKETTGK-EVDLKEAILLLKDFIKP
[Model]
503-762
2z4rC
12%
>target
-----------------------------------INILLCGDPGTSKSQLLQYVYNLVP-----R-GQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTS-VLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLM-LDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKR-----
>2z4rC
TPLNPDYTFENFVVGPGNSFAYHAALEVAKHPGRYNPLFIYGGVGLGKTHLLQSIGNYVVQNEPDLRVMYITSEKFLNDLVD--SMKE----GKLNEFREKYRKKVDILLIDDVQFLIGKTGVQTELFHTFNEL----------HDSGKQIVICSDREPQ-KL---------SEFQDRLVSRFQMGLVAKLEPPDEETR------------------------KSIARKM---LEI-EHGELPEEVLNFVAENV-------D------DNLRRLRGAIIKLLVYKETTGK-EVDLKEAILLLKDFIKP
[Model]
3pxg: STRUCTURE OF MECA121 AND CLPC1-485 COMPLEX Solved by: X-RAY, Resolution: 3.65A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
500-717
3pxgE
13%
>target
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RAEINILLCGDPGTSKSQLLQYVYN-LVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQT------GALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMP-RLSEEASQALIEAYVNMR---------------------------------------------------------------------------------
>3pxgE
FGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSEKIQKEVESLIGRGQEMSQTIHYTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM---------------TLEDRLKKVMDEIRQAGNIILFIDA--------KPS-----------LARGE--------LQCIGATTLDE--------YRKYIEKDAALERRFQPIQ--VDQPSVDESIQILQGLRDRYEAHH-R---VSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVVSSWT
[Model]
500-717
3pxgD
13%
>target
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RAEINILLCGDPGTSKSQLLQYVYN-LVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQT------GALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMP-RLSEEASQALIEAYVNMR---------------------------------------------------------------------------------
>3pxgD
FGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSEKIQKEVESLIGRGQEMSQTIHYTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM---------------TLEDRLKKVMDEIRQAGNIILFIDA--------KPS-----------LARGE--------LQCIGATTLDE--------YRKYIEKDAALERRFQPIQ--VDQPSVDESIQILQGLRDRYEAHH-R---VSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVVSSWT
[Model]
500-712
3pxgF
12%
>target
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKG-SSAVGLTAYVMKDPETRQLVLQT------GALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMP-RLSEEASQALIEA--------------------------------------------------------------------------------------
>3pxgF
FGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSEKIQKEVESLIGRGQEMSQTIHYTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQI-----INNEVPEILRDKRVM----------TLEDRLKKVMDEIRQAGNIILFIDAL-----------KPSLARG---------------ELQCIGATTLDE--------YRKYIEKDAALERRFQPIQV--DQPSVDESIQILQGLRDRYEAHH-R---VSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVTVDDIAMVVSSWT
[Model]
2z4s: CRYSTAL STRUCTURE OF DOMAIN III FROM THE THERMOTOGA MARITIMA REPLICATION INITIATION PROTEIN DNAA Solved by: X-RAY, Resolution: 3.05A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
503-762
2z4sA
12%
>target
-----------------------------------INILLCGDPGTSKSQLLQYVYNLVP-----R-GQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTS-VLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLM-LDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKR-----
>2z4sA
TPLNPDYTFENFVVGPGNSFAYHAALEVAKHPGRYNPLFIYGGVGLGKTHLLQSIGNYVVQNEPDLRVMYITSEKFLNDLVD--SMKE----GKLNEFREKYRKKVDILLIDDVQFLIGKTGVQTELFHTFNEL----------HDSGKQIVICSDREPQ-KL---------SEFQDRLVSRFQMGLVAKLEPPDEETR------------------------KSIARKM---LEI-EHGELPEEVLNFVAENV-------D------DNLRRLRGAIIKLLVYKETTGK-EVDLKEAILLLKDFIKP
[Model]
2xsz: THE DODECAMERIC HUMAN RUVBL1:RUVBL2 COMPLEX WITH TRUNCATEDDOMAINS II Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-766
2xszB
14%
>target
---------------------------------SIYEHEDIKKGI--LLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKGSSA------------------VGLTAYVM----------KD-----------PETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHRE--------------
>2xszB
EVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKS-------K---KM-AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIQDVTLHDLDVANARTEITDKLRGEINKVVNK--YIDQGIAELVPGVLFVDEVHMLDIECFTYLHRALESSIAP--------------IVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMII-RTM-LYTPQ---EMKQ---------------------IIKI---RAQT-EGINISEEALNHLGEIGT-------K-----TTLRYSVQLLTPANLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQQDK
[Model]
466-765
2xszE
12%
>target
---------------------APSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGK---------GSS---------AVGLTAYV-MKD---------PETRQ---------LVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHR----------------------
>2xszE
IGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVL-EMIR----EG---KI-AGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIHTVSLHEIDVINSRTEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPV--------------LIMATNRGITRIRG-TSYQSPHGIPIDLLDRLLIVS--TTPYSEKDTKQILRIRCE--------------------------EEDV--EMSEDAYTVLTRIG-------L-----ETSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMKEYQDAFLFNELK
[Model]
468-766
2xszC
15%
>target
---------------------------------SIYEHEDIKKGI--LLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKGSSA------------------VGLTAYVMKD-----------------------PETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHRE-------------
>2xszC
EVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIK-------SK-K---MAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKIIQDVTLHDLDVANATEITDKLRGEINKVVNKYIDQGI--AELVPGVLFVDEVHMLDIECFTYLHRALESSIAPI--------------VIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMIIR--TMLYTPQ----------------------------EMKQIIKIRAQTEGINISEEALNHLGEIG-------T-----KTTLRYSVQLLTPANLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQQD
[Model]
468-767
2xszA
15%
>target
---------------------------------SIYEHEDIKKGIL--LQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKGSS----AVGLT--------------A-----------YVMKDPET---R------QLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHREA-----------
>2xszA
EVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKS-------K---K-MAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIIQDVTLHDLDVANARTEITDKLRGEINKVVNKYIDQGIAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPI---VIFASNRGNCVI-RGTE------DIT----SPHGIPLDLLDRVM-IIRT-MLYTPQ----------------------------EMKQIIKIRAQTEGINISEEALNHLGEIGT-------K-----TTLRYSVQLLTPANLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQQ
[Model]
468-765
2xszD
12%
>target
----------------------SIYEHEDIKKGI--LLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ-YTSGKGSS------------------AVGLTAY-VMKDPE----TRQ-------------LVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHR-------------------
>2xszD
GAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIRE-------G-K--I-AGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIHTVSLHEIDVINSREIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMAP--------------VLIMATNRGITRIRG-TSYQSPHGIPIDLLDRLLIVS--TTPYSEKDTKQILRIRCE-------------------------E-E--DVEMSEDAYTVLTRIGL-------E-----TSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMKEYQDAFLFN
[Model]
468-764
2xszF
12%
>target
-----------------------SIYEHEDIKKGI--LLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPR-GQYTSGKGSSA----V--------------GL-TAYVMKDP-------------------ETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLH--------------------
>2xszF
IGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIRE-------G---K-IAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIHTVSLHEIDVINSREIKSEVREQINAKVAEW--REEGKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMA--------------PVLIMATNRGITRIRGT-SYQSPHGIPIDLLDRLLIVS--TTPYSEKDTKQILRIRCE--------------------------EEDV--EMSEDAYTVLTRIGL-------E-----TSLRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMKEYQDAFLFN
[Model]
1iqp: CRYSTAL STRUCTURE OF THE CLAMP LOADER SMALL SUBUNIT FROM PYROCOCCUS FURIOSUS Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-656
1iqpC
12%
>target
-----------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLV------PRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEA-----------------------------------------------------------------------------------------------------------------------------------------------------------
>1iqpC
KVLEKPWVEKYRPQRLDDIVGQEHIVKRLKHYVK--------TG-S-----MPHLLFAGPPGVGKTTAALALARELFGENWRHNFLELN--ASDERG--INVIREKV-KEFA-RTKPIGGASFKIIFLDEADALTQDAQQALRRTMEMFS-------------SNVRFILSCNYS-------------SKIIEPIQSRCAIFR--FRPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALDKKITDENVFMVASRARPEDIREMMLLALKGNFLKAREKLREILLKQGLSGEDVLVQMHKEVFNLPIEEPKKVLLADKIGEYNFRLVEGANEIIQLEALLAQFTLIGKK
[Model]
461-646
1iqpA
12%
>target
-------------LASALAP----SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVP----RGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDN--GICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLI-------------------------------------------------------------------------------------------------------------------------------------------------------------------
>1iqpA
SEEIREVKVLEKPWVEKYRPQRLDDIVGQEHIVKRLKHYVK--------TG---SM---PHLLFAGPPGVGKTTAALALARELFGENWRHNFLELNASDERG--INVIREKV-KEFA---RTKPIGGASFKIIFLDEADALTQDAQQALRRTMEMFS-------------SNVRFILSCNYS-------------SKIIEPIQSRCAIFRFRPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALDKKITDENVFMVASRARPEDIREMMLLALKGNFLKAREKLREILLKQGLSGEDVLVQMHKEVFNLPIEEPKKVLLADKIGEYNFRLVEGANEIIQLEALLAQFTLIGKK
[Model]
461-646
1iqpD
12%
>target
-------------LASALAP----SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVP----RGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDN--GICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLI-------------------------------------------------------------------------------------------------------------------------------------------------------------------
>1iqpD
SEEIREVKVLEKPWVEKYRPQRLDDIVGQEHIVKRLKHYVK--------TG---SM---PHLLFAGPPGVGKTTAALALARELFGENWRHNFLELNASDERG--INVIREKV-KEFA---RTKPIGGASFKIIFLDEADALTQDAQQALRRTMEMFS-------------SNVRFILSCNYS-------------SKIIEPIQSRCAIFRFRPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALDKKITDENVFMVASRARPEDIREMMLLALKGNFLKAREKLREILLKQGLSGEDVLVQMHKEVFNLPIEEPKKVLLADKIGEYNFRLVEGANEIIQLEALLAQFTLIGKK
[Model]
461-646
1iqpF
12%
>target
-------------LASALAP----SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVP----RGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDN--GICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLI-------------------------------------------------------------------------------------------------------------------------------------------------------------------
>1iqpF
SEEIREVKVLEKPWVEKYRPQRLDDIVGQEHIVKRLKHYVK--------TG---SM---PHLLFAGPPGVGKTTAALALARELFGENWRHNFLELNASDERG--INVIREKV-KEFA---RTKPIGGASFKIIFLDEADALTQDAQQALRRTMEMFS-------------SNVRFILSCNYS-------------SKIIEPIQSRCAIFRFRPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALDKKITDENVFMVASRARPEDIREMMLLALKGNFLKAREKLREILLKQGLSGEDVLVQMHKEVFNLPIEEPKKVLLADKIGEYNFRLVEGANEIIQLEALLAQFTLIGKK
[Model]
461-646
1iqpB
12%
>target
-------------LASALAP----SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVP----RGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDN--GICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLI-------------------------------------------------------------------------------------------------------------------------------------------------------------------
>1iqpB
SEEIREVKVLEKPWVEKYRPQRLDDIVGQEHIVKRLKHYVK--------TG---SM---PHLLFAGPPGVGKTTAALALARELFGENWRHNFLELNASDERG--INVIREKV-KEFA---RTKPIGGASFKIIFLDEADALTQDAQQALRRTMEMFS-------------SNVRFILSCNYS-------------SKIIEPIQSRCAIFRFRPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALDKKITDENVFMVASRARPEDIREMMLLALKGNFLKAREKLREILLKQGLSGEDVLVQMHKEVFNLPIEEPKKVLLADKIGEYNFRLVEGANEIIQLEALLAQFTLIGKK
[Model]
461-646
1iqpE
12%
>target
-------------LASALAP----SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVP----RGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDN--GICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLI-------------------------------------------------------------------------------------------------------------------------------------------------------------------
>1iqpE
SEEIREVKVLEKPWVEKYRPQRLDDIVGQEHIVKRLKHYVK--------TG---SM---PHLLFAGPPGVGKTTAALALARELFGENWRHNFLELNASDERG--INVIREKV-KEFA---RTKPIGGASFKIIFLDEADALTQDAQQALRRTMEMFS-------------SNVRFILSCNYS-------------SKIIEPIQSRCAIFRFRPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALDKKITDENVFMVASRARPEDIREMMLLALKGNFLKAREKLREILLKQGLSGEDVLVQMHKEVFNLPIEEPKKVLLADKIGEYNFRLVEGANEIIQLEALLAQFTLIGKK
[Model]
4fcw: CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN OF CLPB Solved by: X-RAY, Resolution: 2.35A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
460-712
4fcwA
11%
>target
---------RLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEI-NILLCGDPGTSKSQLLQYVYNLVPR----GQYTSGKGSSAVGLTAYVMKDPETRQLV-LQT----GALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIES----QWNPK-------KTTIENI--QLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAY-AHSTIMPRLSEEASQALIEA-------------------------------------------------------
>4fcwA
MLGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARA-GLKD-----PNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGA-PPGYVGYEEGGQLTEAVRRRPYSVILFDAIEKAHPDVFNILLQMLDDGRLTDSHG-RTVD-FRNTVIIMTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFR-PLTKEQIRQIVEIQM--------------------SYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKILAGEVKEGDRVQVDVGPAGLVFAVPARV
[Model]
460-712
4fcwC
12%
>target
---------RLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEI-NILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPET-----RQLVLQT----GALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNA-RTSVLAAANP----------IESQWNPKKT-TIEN--IQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEA-------------------------------------------------------
>4fcwC
MLGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRAR-AGLKDP-----NRPIGSFLFLGPTGVGKTELAKTLAATLFDT------EEAMIRIDMTEYMEKHAVSRLIGAPPEEGGQLTEAVRRRPYSVILFDAIEKAHPDVFNILLQMLDDGRLTDSH-GRT--VDFRNTVIIMTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQ-IRQIVEIQMSY-----------------LRARL--AEKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKILAGEVKEGDRVQVDVGPAGLVFAVPARV
[Model]
460-712
4fcwF
12%
>target
---------RLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEI-NILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPET-----RQLVLQT----GALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNA-RTSVLAAANP----------IESQWNPKKT-TIEN--IQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEA-------------------------------------------------------
>4fcwF
MLGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRAR-AGLKDP-----NRPIGSFLFLGPTGVGKTELAKTLAATLFDT------EEAMIRIDMTEYMEKHAVSRLIGAPPEEGGQLTEAVRRRPYSVILFDAIEKAHPDVFNILLQMLDDGRLTDSH-GRT--VDFRNTVIIMTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRPLTKEQ-IRQIVEIQMSY-----------------LRARL--AEKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKILAGEVKEGDRVQVDVGPAGLVFAVPARV
[Model]
1l8q: CRYSTAL STRUCTURE OF DNA REPLICATION INITIATION FACTOR Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
504-751
1l8qA
12%
>target
-------------------------------------NILLCGDPGTSKSQLLQYVYNLV----PRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNEST--RSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDL--IFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNK----------------------------------------------------------------------------------------------------
>1l8qA
DFLNPKYTLENFIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFAQ-AMVEHL-KK---G--TINEFRNMYKSVDLLLLDDVQFLSGKERTQIEFFHIFNT----LYL-------LEKQIILASDRHP----------QKLDGVSDRLVSRFEGGILVEI-E-LDNKTRFKI------------------------IKEK---LKE-FNLELRKEVIDYLLENT-------------K-NVREIEGKIKLIKLKGFEGLERKERKERDKLMQIVEFVANYYAVKVEDILSDKRNKRTSEARKIAMYLCRKVCSASLIEIARAFKRKDHTTVIHAIRSVEEEKKRKFKHLVGFLEKQAFDKIC
[Model]
1kyi: HSLUV (H. INFLUENZAE)-NLVS VINYL SULFONE INHIBITOR COMPLEX Solved by: X-RAY, Resolution: 3.10A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-737
1kyiU
16%
>target
--------------SIYEHEDIKKGILLQLF---GGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSA---VGLTAYVMK---DPETRQ---LV----LQTGAL-VLSDNGICCIDEFDKMNES---------TRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAH-STIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLI--------------------------------------------
>1kyiU
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQ--EPLR-HEVTPKNILMIGPTGVGKTEIARRLAKLANAPFI-KVEAEVDSIIRDLTDSAMKLVRQQEIAKNRKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKSGADVSREGVQRDLLPLVEGSTVST-KHGMVKT--DHILFIASGAFQV---------ARPSDLIPELQGRLPIRVE-LTALSAADFERILTEPH----------------ASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNE-----KTENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
468-737
1kyiX
16%
>target
--------------SIYEHEDIKKGILLQLF---GGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSA---VGLTAYVMK---DPETRQ---LV----LQTGAL-VLSDNGICCIDEFDKMNES---------TRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAH-STIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLI--------------------------------------------
>1kyiX
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQ--EPLR-HEVTPKNILMIGPTGVGKTEIARRLAKLANAPFI-KVEAEVDSIIRDLTDSAMKLVRQQEIAKNRKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKSGADVSREGVQRDLLPLVEGSTVST-KHGMVKT--DHILFIASGAFQV---------ARPSDLIPELQGRLPIRVE-LTALSAADFERILTEPH----------------ASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNE-----KTENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
468-737
1kyiT
16%
>target
--------------SIYEHEDIKKGILLQLF---GGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSA---VGLTAYVMK---DPETRQ---LV----LQTGAL-VLSDNGICCIDEFDKMNES---------TRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAH-STIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLI--------------------------------------------
>1kyiT
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQ--EPLR-HEVTPKNILMIGPTGVGKTEIARRLAKLANAPFI-KVEAEVDSIIRDLTDSAMKLVRQQEIAKNRKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKSGADVSREGVQRDLLPLVEGSTVST-KHGMVKT--DHILFIASGAFQV---------ARPSDLIPELQGRLPIRVE-LTALSAADFERILTEPH----------------ASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNE-----KTENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
468-737
1kyiW
16%
>target
--------------SIYEHEDIKKGILLQLF---GGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSA---VGLTAYVMK---DPETRQ---LV----LQTGAL-VLSDNGICCIDEFDKMNES---------TRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAH-STIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLI--------------------------------------------
>1kyiW
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQ--EPLR-HEVTPKNILMIGPTGVGKTEIARRLAKLANAPFI-KVEAEVDSIIRDLTDSAMKLVRQQEIAKNRKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKSGADVSREGVQRDLLPLVEGSTVST-KHGMVKT--DHILFIASGAFQV---------ARPSDLIPELQGRLPIRVE-LTALSAADFERILTEPH----------------ASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNE-----KTENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
468-737
1kyiS
16%
>target
--------------SIYEHEDIKKGILLQLF---GGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSA---VGLTAYVMK---DPETRQ---LV----LQTGAL-VLSDNGICCIDEFDKMNES---------TRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAH-STIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLI--------------------------------------------
>1kyiS
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQ--EPLR-HEVTPKNILMIGPTGVGKTEIARRLAKLANAPFI-KVEAEVDSIIRDLTDSAMKLVRQQEIAKNRKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKSGADVSREGVQRDLLPLVEGSTVST-KHGMVKT--DHILFIASGAFQV---------ARPSDLIPELQGRLPIRVE-LTALSAADFERILTEPH----------------ASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNE-----KTENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
468-737
1kyiV
16%
>target
--------------SIYEHEDIKKGILLQLF---GGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSA---VGLTAYVMK---DPETRQ---LV----LQTGAL-VLSDNGICCIDEFDKMNES---------TRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAH-STIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLI--------------------------------------------
>1kyiV
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQ--EPLR-HEVTPKNILMIGPTGVGKTEIARRLAKLANAPFI-KVEAEVDSIIRDLTDSAMKLVRQQEIAKNRKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKSGADVSREGVQRDLLPLVEGSTVST-KHGMVKT--DHILFIASGAFQV---------ARPSDLIPELQGRLPIRVE-LTALSAADFERILTEPH----------------ASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNE-----KTENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
468-737
1kyiC
12%
>target
--------------SIYEHEDIKKGILLQLF---GGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPE--------------TRQLVLQTG------ALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIE---SQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHS-TIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLI--------------------------------------------
>1kyiC
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQ--EPLR-HEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIK-VEATKFTE-VDSIIRDLTDSAMKLVRQQEIAKNAAKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKGADVSREGVQRDLLPLVEGSTVSTKHG---MVKTDHILFIASGAFQVA----RPSDLIPELQGRLPIRVEL-TALSAADFERILTEPH----------------ASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEK-----TENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
468-737
1kyiF
12%
>target
--------------SIYEHEDIKKGILLQLF---GGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPE--------------TRQLVLQTG------ALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIE---SQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHS-TIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLI--------------------------------------------
>1kyiF
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQ--EPLR-HEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIK-VEATKFTE-VDSIIRDLTDSAMKLVRQQEIAKNAAKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKGADVSREGVQRDLLPLVEGSTVSTKHG---MVKTDHILFIASGAFQVA----RPSDLIPELQGRLPIRVEL-TALSAADFERILTEPH----------------ASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEK-----TENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
468-737
1kyiB
12%
>target
--------------SIYEHEDIKKGILLQLF---GGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPE--------------TRQLVLQTG------ALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIE---SQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHS-TIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLI--------------------------------------------
>1kyiB
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQ--EPLR-HEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIK-VEATKFTE-VDSIIRDLTDSAMKLVRQQEIAKNAAKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKGADVSREGVQRDLLPLVEGSTVSTKHG---MVKTDHILFIASGAFQVA----RPSDLIPELQGRLPIRVEL-TALSAADFERILTEPH----------------ASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEK-----TENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
468-737
1kyiE
12%
>target
--------------SIYEHEDIKKGILLQLF---GGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPE--------------TRQLVLQTG------ALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIE---SQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHS-TIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLI--------------------------------------------
>1kyiE
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQ--EPLR-HEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIK-VEATKFTE-VDSIIRDLTDSAMKLVRQQEIAKNAAKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKGADVSREGVQRDLLPLVEGSTVSTKHG---MVKTDHILFIASGAFQVA----RPSDLIPELQGRLPIRVEL-TALSAADFERILTEPH----------------ASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEK-----TENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
468-737
1kyiA
12%
>target
--------------SIYEHEDIKKGILLQLF---GGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPE--------------TRQLVLQTG------ALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIE---SQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHS-TIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLI--------------------------------------------
>1kyiA
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQ--EPLR-HEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIK-VEATKFTE-VDSIIRDLTDSAMKLVRQQEIAKNAAKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKGADVSREGVQRDLLPLVEGSTVSTKHG---MVKTDHILFIASGAFQVA----RPSDLIPELQGRLPIRVEL-TALSAADFERILTEPH----------------ASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEK-----TENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
468-737
1kyiD
12%
>target
--------------SIYEHEDIKKGILLQLF---GGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPE--------------TRQLVLQTG------ALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIE---SQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHS-TIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLI--------------------------------------------
>1kyiD
SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQ--EPLR-HEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIK-VEATKFTE-VDSIIRDLTDSAMKLVRQQEIAKNAAKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKGADVSREGVQRDLLPLVEGSTVSTKHG---MVKTDHILFIASGAFQVA----RPSDLIPELQGRLPIRVEL-TALSAADFERILTEPH----------------ASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEK-----TENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL
[Model]
1ojl: CRYSTAL STRUCTURE OF A SIGMA54-ACTIVATOR SUGGESTS THE MECHANISM FOR THE CONFORMATIONAL SWITCH NECESSARY FOR SIGMA54 BINDING Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
501-762
1ojlC
13%
>target
----------------------AEINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTSGKGS--SA----VGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDE-AYD-RRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKR---
>1ojlC
SHMIGSSPAMQHLLNEIAMVAPSDATVLIHGDSGTGKELVARALHACSARSDRPLVTLNCAALNESLLESELFGH-EKGAFTGADKRREGRFVEADGGTLFLDEIGDISPLMQVRLLRAIQEREVQRVG--SNQTISVDVRLIAATHRDLA------EEVSAGRFRQDLYYRLNVVAIEMPSLRQRREDIPLLADHF--------------------LRRFAERNRK-VVKGFTPQAMDLLIHYD------------WPGNIRELENAIERAVVLLT---GEYISERELPLAIAATP
[Model]
500-762
1ojlB
13%
>target
---------------------RAEINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTSGKGS--SA----VGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEA-YD-RRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKR--
>1ojlB
SHMIGSSPAMQHLLNEIAMVAPSDATVLIHGDSGTGKELVARALHACSARSDRPLVTLNCAALNESLLESELFGH-EKGAFTGADKRREGRFVEADGGTLFLDEIGDISPLMQVRLLRAIQEREVQR--VGSNQTISVDVRLIAATHRDLA------EEVSAGRFRQDLYYRLNVVAIEMPSLRQRREDIPLLADHF--------------------LRRFAERNRK-VVKGFTPQAMDLLIHYD------------WPGNIRELENAIERAVVLLT---GEYISERELPLAIAAT
[Model]
500-760
1ojlA
11%
>target
--------------------RAEINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTSGKGSSAVGLTAYVMKD----PETRQL-VLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAY-AHST--IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEA-------------------------------------------------
>1ojlA
HMIGSSPAMQHLLNEIAMVAPSDATVLIHGDSGTGKELVARALHACSARSDRPLVTLNC---AALNESLLESELFGHEKGAFTKRREGRFVEADGGTLFLDEIGDISPLMQVRLLRAIQEREVQ--RVGSNQTISVDVRLIAATHRD-----L-AEEVSAGRFRQDLYYRLNVVAIEMPSLRQRRE--------------------DI--PLLADHFLRRFAERNRKVVKGFTPQAMDLLIHY------------DWPGNIRELENAIERAVVLLT---GEYISERELPLAIAYSGEIQPLVDVEKEVILAALEKTGGNKTEAARQLGITRKTLLAKLSR
[Model]
501-762
1ojlF
12%
>target
---------------------AEINILLCGDPGTSKSQLLQYVYNLVPRG----QYTSGKGSSAVGLTAYVMKD----PETRQL-VLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEA-YDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAY-AHS--TIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKR--
>1ojlF
HMIGSSPAMQHLLNEIAMVAPSDATVLIHGDSGTGKELVARALHACSARSDRPLVTLNCA-----ALNESLLESELFGHEKGAFTKRREGRFVEADGGTLFLDEIGDISPLMQVRLLRAIQEREVQR--VGSNQTISVDVRLIAATHRD-----LAE-EVSAGRFRQDLYYRLNVVAIEMPSLRQRREDI-----------------------PLLADHFLRRFAERNRKVVKGFTPQAMDLLIHY------------DWPGNIRELENAIERAVVLLT---GEYISERELPLAIAAT
[Model]
501-757
1ojlE
12%
>target
---------------------AEINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTSGKGSSAVGLTAYVMKD----PETRQL-VLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDE-AYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAY-AHST--IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDV---------------------------------------------
>1ojlE
HMIGSSPAMQHLLNEIAMVAPSDATVLIHGDSGTGKELVARALHACSARSDRPLVTL---NCAALNESLLESELFGHEKGAFTKRREGRFVEADGGTLFLDEIGDISPLMQVRLLRAIQEREVQR--VGSNQTISVDVRLIAATHRD-----L-AEEVSAGRFRQDLYYRLNVVAIEMPSLRQRRED---------------------I--PLLADHFLRRFAERNRKVVKGFTPQAMDLLIHY------------DWPGNIRELENAIERAVVLLT---GEYISERELPLAIPLVDVEKEVILAALEKTGGNKTEAARQLGITRKTLLAKLSR
[Model]
500-760
1ojlD
11%
>target
--------------------RAEINILLCGDPGTSKSQLLQYVYNLVPRGQ--YTSGKGSSAVGLTAYV--------MKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAH-ST--IMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEA---------------------------------------------------
>1ojlD
HMIGSSPAMQHLLNEIAMVAPSDATVLIHGDSGTGKELVARALHACSARSDRPLVTLN---CAALNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLDEIGDISPLMQVRLLRAIQEREVQ--RVGSNQTISVDVRLIAATHRD-----LA-EEVSAGRFRQDLYYRLNVVAIEMPSLRQRRE--------------------DI--PLLADHFLRRFAERNRKVVKGFTPQAMDLLIHYD------------WPGNIRELENAIERAVVLLT---GEYISERELPLAIAATPIKEIQPLVDVEKEVILAALEKTGGNKTEAARQLGITRKTLLAKLSR
[Model]
2v1u: STRUCTURE OF THE AEROPYRUM PERNIX ORC1 PROTEIN IN COMPLEX WITH DNA Solved by: X-RAY, Resolution: 3.1A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
460-853
2v1uA
11%
>target
----------RLASALAPS-IYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPR----------GQYTSGKGSSAVG-----LTAYV-MKDPETRQLVLQTGAL---VLSDN---GICCIDEFDKMNEST--RSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMP-RLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHREALKQSATDPRTGIVDISILTTGMSATSRKRKEELAEALRKLILSKGKTPALKYQQLFEDIRGQ----SDTAITKDMFEEALRALADDDFLT--------------------------------------
>2v1uA
LESKIFRKRWVLLPDYVPDVLPHREAELRRLAEVLAPALRG----E------KPSNALLYGLTGTGKTAVARLVLRRLEARASSLGVLVKPIYVNARHRETPYRVASAIAEAVGVRVPFTGLSVGEVYERLVKRLSRLRGIYIIVLDEIDFLPKRPGGQDLLYRITRI-------------NQELVSLVGITNSLG--------FVE--NLEPRVKSSLGEVELVFPPYTAPQLRDILETRA---------------------------EEAFNPGVLDPDVVPLCAALAA----------REHGDARRALDLLRVAGEIAERRREERVRREHVYSARAEIERDRVSEVVR-------------TLPLHAK----LVLLSIMML---EDGGRPASTGEIYERYKELTSTLGLEHVTLRRVSGIISELDMLGIVKSRVVSRGRYGKTREVSLDADRLAVENALSEDPFVARLL
[Model]
3bos: CRYSTAL STRUCTURE OF PUTATIVE DNA REPLICATION REGULATOR HD(YP_927791.1) FROM SHEWANELLA AMAZONENSIS SB2B AT 1.75 A RESOLUTION Solved by: X-RAY, Resolution: 1.75A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
502-763
3bosA
12%
>target
-------------------------------------EINILLCGDPGTSKSQLLQYVYNLVPR----GQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSV------LHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLI-FLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRL
>3bosA
LQLSLPVHLPDDETFTSYYPGNDELIGALKSAASGDGVQAIYLWGPVKSGRTHLIHAACARANELERRSFYIPLGIH-----------A-SISTALLE----GLEQFDLICIDDVDAVAGHPLWEEAIFDLYNRVAEQ---------------KRGSLIVSASASPMEA---------GFVLPDLVSRMHWGLTYQLQPMMDDEKLAALQRR---------------------------AAM-RGLQLPEDVGRFLLNRM-------------ARDLRTLFDVLDRLDKASMVH-QRKLTIPFVKEMLRL
[Model]
502-763
3bosB
11%
>target
----------------------------------------EINILLCGDPGTSKSQLLQYVYNLVPR----GQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTR--SVLHEVMEQQTLSIAKAGIICQLNARTSV-LAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIF-LMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIA-YAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRL
>3bosB
PLQLSLPVHLPDDETFTSYYPAAGNDELIGALKSAASGDGVQAIYLWGPVKSGRTHLIHAACARANELERRSFYIPLG------IH----------ASISTALLEGLEQFDLICIDDVDAVAGHPLWEEAIFDLYNRV-AE----------QKRGSLIVSASASP-MEAG---------FVLPDLVSRMHWGLTYQLQPMMDD----------------------------EKLAALQRRAAM-RGLQLPEDVGRFLLNRM-------A------RDLRTLFDVLDRLDKASMVHQ-RKLTIPFVKEMLRL
[Model]
2chv: REPLICATION FACTOR C ADPNP COMPLEX Solved by: X-RAY, Resolution: 4.00A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-647
2chvC
11%
>target
------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLV----PRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDN--GICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIF-----------------------------------------------------------------------------------------------------------------------------------------------------------------
>2chvC
IWVEKYRPRTLDEVVGQDEVIQRLKGYVERK--------------NIPHLLFSGPPGTGKTATAIALARDLFGENWRDNFIEMNASDERG--IDVVRHKI-KEFARTA---PIGGAPFKIIFLDEADALTADAQAALRRTMEMYS-------------KSCRFILSCNYV-------------SRIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAAIGEVVDADTIYQITATARPEEMTELIQTALKGNFMEARELLDRLMVEYGMSGEDIVAQLFREIISMPIKDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLAYLSTLAK
[Model]
468-647
2chvF
11%
>target
------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLV----PRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDN--GICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIF-----------------------------------------------------------------------------------------------------------------------------------------------------------------
>2chvF
IWVEKYRPRTLDEVVGQDEVIQRLKGYVERK--------------NIPHLLFSGPPGTGKTATAIALARDLFGENWRDNFIEMNASDERG--IDVVRHKI-KEFARTA---PIGGAPFKIIFLDEADALTADAQAALRRTMEMYS-------------KSCRFILSCNYV-------------SRIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAAIGEVVDADTIYQITATARPEEMTELIQTALKGNFMEARELLDRLMVEYGMSGEDIVAQLFREIISMPIKDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLAYLSTLAK
[Model]
468-647
2chvB
11%
>target
------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLV----PRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDN--GICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIF-----------------------------------------------------------------------------------------------------------------------------------------------------------------
>2chvB
IWVEKYRPRTLDEVVGQDEVIQRLKGYVERK--------------NIPHLLFSGPPGTGKTATAIALARDLFGENWRDNFIEMNASDERG--IDVVRHKI-KEFARTA---PIGGAPFKIIFLDEADALTADAQAALRRTMEMYS-------------KSCRFILSCNYV-------------SRIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAAIGEVVDADTIYQITATARPEEMTELIQTALKGNFMEARELLDRLMVEYGMSGEDIVAQLFREIISMPIKDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLAYLSTLAK
[Model]
468-647
2chvE
11%
>target
------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLV----PRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDN--GICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIF-----------------------------------------------------------------------------------------------------------------------------------------------------------------
>2chvE
IWVEKYRPRTLDEVVGQDEVIQRLKGYVERK--------------NIPHLLFSGPPGTGKTATAIALARDLFGENWRDNFIEMNASDERG--IDVVRHKI-KEFARTA---PIGGAPFKIIFLDEADALTADAQAALRRTMEMYS-------------KSCRFILSCNYV-------------SRIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAAIGEVVDADTIYQITATARPEEMTELIQTALKGNFMEARELLDRLMVEYGMSGEDIVAQLFREIISMPIKDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLAYLSTLAK
[Model]
468-647
2chvA
11%
>target
------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLV----PRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDN--GICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIF-----------------------------------------------------------------------------------------------------------------------------------------------------------------
>2chvA
IWVEKYRPRTLDEVVGQDEVIQRLKGYVERK--------------NIPHLLFSGPPGTGKTATAIALARDLFGENWRDNFIEMNASDERG--IDVVRHKI-KEFARTA---PIGGAPFKIIFLDEADALTADAQAALRRTMEMYS-------------KSCRFILSCNYV-------------SRIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAAIGEVVDADTIYQITATARPEEMTELIQTALKGNFMEARELLDRLMVEYGMSGEDIVAQLFREIISMPIKDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLAYLSTLAK
[Model]
468-647
2chvD
11%
>target
------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLV----PRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDN--GICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIF-----------------------------------------------------------------------------------------------------------------------------------------------------------------
>2chvD
IWVEKYRPRTLDEVVGQDEVIQRLKGYVERK--------------NIPHLLFSGPPGTGKTATAIALARDLFGENWRDNFIEMNASDERG--IDVVRHKI-KEFARTA---PIGGAPFKIIFLDEADALTADAQAALRRTMEMYS-------------KSCRFILSCNYV-------------SRIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAAIGEVVDADTIYQITATARPEEMTELIQTALKGNFMEARELLDRLMVEYGMSGEDIVAQLFREIISMPIKDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLAYLSTLAK
[Model]
1sxj: CRYSTAL STRUCTURE OF THE EUKARYOTIC CLAMP LOADER (REPLICATION FACTOR C, RFC) BOUND TO THE DNA SLIDING CLAM(PROLIFERATING CELL NUCLEAR ANTIGEN, PCNA) Solved by: X-RAY, Resolution: 2.85A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-646
1sxjC
15%
>target
--------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQ----YTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDN--GICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLI-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>1sxjC
NLPWVEKYRPETLDEVYGQNEVITTVRKFVDEGK--------------LPHLLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRGI--DVVRNQ-IKDFA-STR--QIFSKGFKLIILDEADAMTNAAQNALRRVIERYTK-------------NTRFCVLANYA-------------HKLTPALLSQCTRFRFQPLPQEAIERRIANVLVHEKLKLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAPRPSDLKAVLKSILEDDWGTAHYTLNKVRSAKGLALIDLIEGIVKILEDYELQNEETRVHLLTKLADIEYSISKGGNDQIQGSAVIGAIKASFEN
[Model]
468-647
1sxjD
12%
>target
------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLV--PR-----GQYTSGKGSSAVGLTAYVMKDPETRQL---VLQT--G----ALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIF---------------------------------------------------------------------------------------------------------------------------------------------------------------------
>1sxjD
PWVEKYRPKNLDEVTAQDHAVTVLKKTLKS--------A---NL---PHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELN--ASDERGIS--IVREKV-KNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYS-------------GVTRFCLICNYV-------------TRIIDPLASQCSKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELAGVVPHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASVVNQLHEYYITNDNFDTNFKNQISWLLFTTDSRLNNGTNEHIQLLNLLVKISQL
[Model]
468-645
1sxjB
13%
>target
---------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPRGQY----TSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDL------------------------------------------------------------------------------------------------------------------------------------------------------------------
>1sxjB
LQLPWVEKYRPQVLSDIVGNKETIDRLQQIAKDG---------N-----MPHMIISGMPGIGKTTSVHCLAHELLGRSYADGVLELNASDDRGI--DVVRNQI-KHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYS-------------NSTRFAFACNQS-------------NKIIEPLQSQCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNVFKIVDSPHPLIVKKMLLASNLEDSIQILRTDLWKKGYSSIDIVTTSFRVTKNLAQVKESVRLEMIKEIGLTHMRILEGVGTYLQLASMLAKIHKLNNK
[Model]
469-661
1sxjE
11%
>target
------------IYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLV-PRGQYTSGKGSS-AVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRL---------------------------------------------------------------------------------------------------------------------------------------------------------
>1sxjE
WVDKYRPKSLNALSHNEELTNFLKSLSDQ--------P-----RDLPHLLLYGPNGTGKKTRCMALLESIFGPGVYRNVVSSPYHLEITPSNDRIV-IQE-LLKEVAQMEQRYKCVIINEANSLTKDAQAALRRTMEKYS-------------KNIRLIMVCDSM-------------SPIIAPIKSQCLLIRC--PAPSDSEISTILSDVVTNERIQLETKDILKRIAQASNGNLRVSLLMLESMALNNELALKSSSPIIKPDWIIVIHKLTRKIVKERSVNSLIECRAVLYDLLAHCIPANIILKELTFSLLDVETLNTTNKSSIIEYSSVFDERLSLGNKAIFHLEGFIAKVMCCLD
[Model]
4fd2: CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN OF CLPB Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
462-712
4fd2A
11%
>target
--------ASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEI-NILLCGDPGTSKSQLLQYVYNLVPRG----QYTSGKG----SSAVGLTAYVMKDPETRQLVLQ-----TGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPI----------ESQWNPKKT-TI--ENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEA-------------------------------------------------------
>4fd2A
EREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAG-LK-----DPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAPP-----GYVGYEEGGQLTEAVRRRPYSVILFDAIEKAHPDVFNILLQILDDGRLTDSHGR-TV-DFRNTVIILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRP-LTKEQIRQIVEIQLSY-----------------LRARLA--EKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKILAGEVKEGDRVQVDVGPAGLVFAVPARV
[Model]
462-712
4fd2B
11%
>target
--------ASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEI-NILLCGDPGTSKSQLLQYVYNLVPRG----QYTSGKG----SSAVGLTAYVMKDPETRQLVLQ-----TGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPI----------ESQWNPKKT-TI--ENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEA-------------------------------------------------------
>4fd2B
EREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAG-LK-----DPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAPP-----GYVGYEEGGQLTEAVRRRPYSVILFDAIEKAHPDVFNILLQILDDGRLTDSHGR-TV-DFRNTVIILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRP-LTKEQIRQIVEIQLSY-----------------LRARLA--EKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKILAGEVKEGDRVQVDVGPAGLVFAVPARV
[Model]
462-712
4fd2D
11%
>target
--------ASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEI-NILLCGDPGTSKSQLLQYVYNLVPRG----QYTSGKG----SSAVGLTAYVMKDPETRQLVLQ-----TGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPI----------ESQWNPKKT-TI--ENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEA-------------------------------------------------------
>4fd2D
EREKLLRLEEELHKRVVGQDEAIRAVADAIRRARAG-LK-----DPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGAPP-----GYVGYEEGGQLTEAVRRRPYSVILFDAIEKAHPDVFNILLQILDDGRLTDSHGR-TV-DFRNTVIILTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFRP-LTKEQIRQIVEIQLSY-----------------LRARLA--EKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKILAGEVKEGDRVQVDVGPAGLVFAVPARV
[Model]
2qby: CRYSTAL STRUCTURE OF A HETERODIMER OF CDC6/ORC1 INITIATORSBOUND TO ORIGIN DNA (FROM S. SOLFATARICUS) Solved by: X-RAY, Resolution: 3.35A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
466-854
2qbyA
11%
>target
-------------APSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVPR-----GQYTSGKGSSAVGLTA---YVMK-----DPETRQ---LVLQTGALVL---SDNGICCIDEFDKMNESTRS-VLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIA-YAHSTIM-PRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHREALKQSATDPRTGIVDISILTTGMSATSRKRKEELAEALRKLILSKGKTPALKYQQLFEDIRG-QSDTAITKDMFEEALRALADDDFLTV-------------------------------
>2qbyA
IFINREYLLPDYIPDELPHREDQIRKIASILAPLYR----EE------KPNNIFIYGLTGTGKTAVVKFVLSKLHKKFLGKFKHVYINTRQIDTPYRVLADLLESLDVKVPFTGLSIAELYRRLVKAVRDYGSQVVIVLDEIDAFVKKYNDDILYKLSRI-----------NSEVNKISFIGITNDVK--------FVDL--LDPRVKSSLSEEEIIFPP----------------------------YNAEELEDILTKRAQMAFKPGVLPDNVIKLCAALAA----------REHGDARRALDLLRVSGEIAERMKDTKVKEEYVYMAKEEIERDRVRDIIL-------------TLPFHSK----LVLMAVVS---ISVS-TTGAVYETYLNICKKLGVEAVTQRRVSDIINELDMVGILTAKVVNRGRYGKTKEIGLAVDKNIIVRSLIESD
[Model]
464-854
2qbyB
10%
>target
----------ALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVP------------RGQYTSGKG--SSAVGLTAYVMKDPETRQLVLQTGAL----------VL-SDNGICCIDEFDKMNE--STRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMP-RLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHREALKQSATDPRTGIVDISILTTGMSATSRKRKEELAEALRKLILSKGKTPALKYQQLFEDIRGQS-DTAITKDMFEEALRALADDDFLTV------------------------------------
>2qbyB
KNPKVFIDPLSVFKEIPFREDILRDAAIAIRYFV-----KNE-----VKFSNLFLGLTGTGKTFVSKYIFNEIEEVKKEDEEYKDVKQAYVNCREVGGTPQAVLSSL-AGKLTGFSVPKHGINLGEYIDKIKNGTRNIRAIIYLDEVDTLVKRRGGDIVLYQLLR--------------SDANISVIMISNDINV--------R--DYMEPRVLSSLGPSVI-FKPYDAEQLKFILSKYAE---------------------------YGLIKGTYDDEILSYIAAISAKE----------HGDARKAVNLLFRAAQLA--SGGGIIRKEHVDKAIVDYEQERLIEAV-------------KALPFHYK----LALRSLI---ESED---VMSAHKMYTDLCNKFKQKPLSYRRFSDIISELDMFGIVKIRIINRGRAGGVKKYALVEDKEKVLRALNETFEDSIS
[Model]
4fcv: CRYSTAL STRUCTURE OF THE C-TERMINAL DOMAIN OF CLPB Solved by: X-RAY, Resolution: 3.40A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
460-712
4fcvA
11%
>target
---------RLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEI-NILLCGDPGTSKSQLLQYVYNLVPR----GQYTSGKGSSAVGLTAYVMKDPETRQLV-LQT----GALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIES----QWNPK-------KTTIENI--QLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAY-AHSTIMPRLSEEASQALIEA-------------------------------------------------------
>4fcvA
MLGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARA-GLKD-----PNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGA-PPGYVGYEEGGQLTEAVRRRPYSVILFDAIEKAHPDVFNILLQMLDDGRLTDSHG-RTVD-FRNTVIIMTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFR-PLTKEQIRQIVEIQM--------------------SYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKILAGEVKEGDRVQVDVGPAGLVFAVPARV
[Model]
460-712
4fcvB
11%
>target
---------RLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEI-NILLCGDPGTSKSQLLQYVYNLVPR----GQYTSGKGSSAVGLTAYVMKDPETRQLV-LQT----GALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIES----QWNPK-------KTTIENI--QLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAY-AHSTIMPRLSEEASQALIEA-------------------------------------------------------
>4fcvB
MLGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARA-GLKD-----PNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGA-PPGYVGYEEGGQLTEAVRRRPYSVILFDAIEKAHPDVFNILLQMLDDGRLTDSHG-RTVD-FRNTVIIMTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFR-PLTKEQIRQIVEIQM--------------------SYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKILAGEVKEGDRVQVDVGPAGLVFAVPARV
[Model]
460-712
4fcvC
11%
>target
---------RLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEI-NILLCGDPGTSKSQLLQYVYNLVPR----GQYTSGKGSSAVGLTAYVMKDPETRQLV-LQT----GALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIES----QWNPK-------KTTIENI--QLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAY-AHSTIMPRLSEEASQALIEA-------------------------------------------------------
>4fcvC
MLGEREKLLRLEEELHKRVVGQDEAIRAVADAIRRARA-GLKD-----PNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLIGA-PPGYVGYEEGGQLTEAVRRRPYSVILFDAIEKAHPDVFNILLQMLDDGRLTDSHG-RTVD-FRNTVIIMTSNLGSPLILEGLQKGWPYERIRDEVFKVLQQHFRPEFLNRLDEIVVFR-PLTKEQIRQIVEIQM--------------------SYLRARLAEKRISLELTEAAKDFLAERGYDPVFGARPLRRVIQRELETPLAQKILAGEVKEGDRVQVDVGPAGLVFAVPARV
[Model]
2chq: REPLICATION FACTOR C ADPNP COMPLEX Solved by: X-RAY, Resolution: 4.00A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
468-647
2chqC
11%
>target
------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLV----PRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDN--GICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIF-----------------------------------------------------------------------------------------------------------------------------------------------------------------
>2chqC
IWVEKYRPRTLDEVVGQDEVIQRLKGYVERK--------------NIPHLLFSGPPGTGKTATAIALARDLFGENWRDNFIEMNASDERG--IDVVRHKI-KEFARTA---PIGGAPFKIIFLDEADALTADAQAALRRTMEMYS-------------KSCRFILSCNYV-------------SRIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAAIGEVVDADTIYQITATARPEEMTELIQTALKGNFMEARELLDRLMVEYGMSGEDIVAQLFREIISMPIKDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLAYLSTLAK
[Model]
468-647
2chqB
11%
>target
------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLV----PRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDN--GICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIF-----------------------------------------------------------------------------------------------------------------------------------------------------------------
>2chqB
IWVEKYRPRTLDEVVGQDEVIQRLKGYVERK--------------NIPHLLFSGPPGTGKTATAIALARDLFGENWRDNFIEMNASDERG--IDVVRHKI-KEFARTA---PIGGAPFKIIFLDEADALTADAQAALRRTMEMYS-------------KSCRFILSCNYV-------------SRIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAAIGEVVDADTIYQITATARPEEMTELIQTALKGNFMEARELLDRLMVEYGMSGEDIVAQLFREIISMPIKDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLAYLSTLAK
[Model]
468-647
2chqA
11%
>target
------------SIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLV----PRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGALVLSDN--GICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIF-----------------------------------------------------------------------------------------------------------------------------------------------------------------
>2chqA
IWVEKYRPRTLDEVVGQDEVIQRLKGYVERK--------------NIPHLLFSGPPGTGKTATAIALARDLFGENWRDNFIEMNASDERG--IDVVRHKI-KEFARTA---PIGGAPFKIIFLDEADALTADAQAALRRTMEMYS-------------KSCRFILSCNYV-------------SRIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAAIGEVVDADTIYQITATARPEEMTELIQTALKGNFMEARELLDRLMVEYGMSGEDIVAQLFREIISMPIKDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLAYLSTLAK
[Model]
3pxi: STRUCTURE OF MECA108:CLPC Solved by: X-RAY, Resolution: 6.93A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
460-752
3pxiC
10%
>target
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLV---PRGQYTSGKGS-----SAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNA-RTSVLAAANPIESQWNPKKTTIEN--IQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEA-YVNMRKIGSSRGMVSAYPRQLESLIR--LAEAHAKVRFSNKV---------------------
>3pxiC
MFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSEKIQKEVESLIGRGQEMSQTIHYTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLDMGEDRLKKVMDEIRQAGNIILFIDAILKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFTPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQEEVTVDDIAMVVSSWTAQTETDKLLNMENILHSRVIGQDEAVVAVAKAVRRARA-GLKDPK----RPIGSFIFLGPTGVGKTELARALAESIFGDEESM-IRIDMSEYMEKHSTSLTEKV----------------RRKPYSVVLLDAIEKAHPDVFNILLQVLEDGRLT--------TVDFRNTILIMTSN-VGAS-EKDK-VMGELKRAFRPEFINRIDEIIVFHE---KK-H---LTEIVSLMS-------------DQLTKR--LKEQDLSIELTDAAKAKVAEEGVD-LE----------YGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVEDGEFVVKTTA
[Model]
460-752
3pxiB
10%
>target
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLV---PRGQYTSGKGS-----SAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNA-RTSVLAAANPIESQWNPKKTTIEN--IQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEA-YVNMRKIGSSRGMVSAYPRQLESLIR--LAEAHAKVRFSNKV---------------------
>3pxiB
FGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSEKIQKEVESLIGRGQEMSQTIHYTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLEDRLKKVMDEIRQAGNIILFIDAKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFTPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQEEVTVDDIAMVVSSWTAQTETDKLLNMENILHSRVIGQDEAVVAVAKAVRRARA-GLKDPK----RPIGSFIFLGPTGVGKTELARALAESIFGDEES-MIRIDMSEYMEKHSTSLTEKVR----------------RKPYSVVLLDAIEKAHPDVFNILLQVLEDGRLT--------TVDFRNTILIMTSN-VGASE-KD-KVMGELKRAFRPEFINRIDEIIVFHE-K--K-H---LTEIVSLMS-------------DQLTKR--LKEQDLSIELTDAAKAKVAEEGVD-L-----E-----YGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVEDGEFVVKTTA
[Model]
461-752
3pxiA
10%
>target
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LASALAPSIYEHEDIKKGILLQLF---GGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLV---PRGQYTSGKG-----SSAVGLTAYVMKDPETRQLVLQTGALVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNA-RTSVLAAANPIESQWNPKKTTIEN--IQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEA-YVNMRKIGSSRGMVSAYPRQLESLIR--LAEAHAKVRFSNKV---------------------
>3pxiA
FGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSEKIQKEVESLIGRGQEMSQTIHYTPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSNSNANTPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVMTLEDRLKKVMDEIRQAGNIILFIDAKPSLARGELQCIGATTLDEYRKYIEKDAALERRFQPIQVDQPSVDESIQILQGLRDRYEAHHRVSITDDAIEAAVKLSDRYISDRFLPDKAIDLIDEAGSKVRLRSFTPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQEVTVDDIAMVVSSWTAQTETDKLNMENILHSRVIGQDEAVVAVAKAVRRARAGLK----DP----KRPIGSFIFLGPTGVGKTELARALAESIFGDEES-MIRIDMSEYMEKHSTSLTEKVRR----------------KPYSVVLLDAIEKAHPDVFNILLQVLEDGRLTT--------VDFRNTILIMTSNV-GAS-EKD-KVMGELKRAFRPEFINRIDEIIVFHE---KK-H---LTEIVSLMS-------------DQLTKR--LKEQDLSIELTDAAKAKVAEEGVD-L----------EYGARPLRRAIQKHVEDRLSEELLRGNIHKGQHIVLDVEDGEFVVKTTA
[Model]
1fnn: CRYSTAL STRUCTURE OF CDC6P FROM PYROBACULUM AEROPHILUM Solved by: X-RAY, Resolution: 2.00A, Identified by HHSEARCH
[ SMTL ]
[ RCSB ]
[ PDBe ]
[ SCOP ]
[ CATH ]
461-858
1fnnA
9%
>target
--------LASALAPS-IYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVP-----RGQYTSGKGSSA---------VGLTAYVMKDPETRQLVLQTG---ALVLSDN---GICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHREALKQSATDPRTGIVDISILTTGMSATSRKRKEELAEALRKLILSKGKTPALKYQQLFEDIRGQ----SDTAITKDMFEEALRALADDDFLTVTGKT--------------------------
>1fnnA
AIVVDDSVFSPSYVPKRLPHREQQLQQLDILLGNWLRN---PGH-----HYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRNFTAIIGEIARSLNIPFPR---RGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAPDILSTFIRLGQEAD---------KLGAFRIALVIVGHND--------AVLN--NLDPSTRGIMGKYVIRFSPYTKDQIFDILLDRA------------------------K--AGLAEGSYSEDILQMIADITGAQTPLDTNR----GDARLAIDILYRSAYAAQQNGRKHIAPEDVRKSSKEVLFGISE------------EVLI-GLPLHEKL----FLLAIVRSLK-ISHTPYITFGDAEESYKIVCEEYGERPRVHSQLWSYLNDLREKGIVETRQNTTLISIGTEPLDTLEAVITKLIKEELR
[Model]
461-858
1fnnB
9%
>target
--------LASALAPS-IYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRAEINILLCGDPGTSKSQLLQYVYNLVP-----RGQYTSGKGSSA---------VGLTAYVMKDPETRQLVLQTG---ALVLSDN---GICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIESQWNPKKTTIENIQLPHTLLSRFDLIFLMLDPQDEAYDRRLAHHLVSLYYQSEEQVEEEFLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVNMRKIGSSRGMVSAYPRQLESLIRLAEAHAKVRFSNKVEAIDVEEAKRLHREALKQSATDPRTGIVDISILTTGMSATSRKRKEELAEALRKLILSKGKTPALKYQQLFEDIRGQ----SDTAITKDMFEEALRALADDDFLTVTGKT--------------------------
>1fnnB
AIVVDDSVFSPSYVPKRLPHREQQLQQLDILLGNWLRN---PGH-----HYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRNFTAIIGEIARSLNIPFPR---RGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAPDILSTFIRLGQEAD---------KLGAFRIALVIVGHND--------AVLN--NLDPSTRGIMGKYVIRFSPYTKDQIFDILLDRA------------------------K--AGLAEGSYSEDILQMIADITGAQTPLDTNR----GDARLAIDILYRSAYAAQQNGRKHIAPEDVRKSSKEVLFGISE------------EVLI-GLPLHEKL----FLLAIVRSLK-ISHTPYITFGDAEESYKIVCEEYGERPRVHSQLWSYLNDLREKGIVETRQNTTLISIGTEPLDTLEAVITKLIKEELR