SWISS-MODEL Repository - Model Details

Model Overview
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1
309

Sequence
UniProt P51951
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
MAT1

Model 3D Structure
Model information:
Modelled residue range: 1 to 65
Based on template: [ 1g25 ]  
Sequence Identity [%]: 90%
Model date: 2008-08-30
Revision date: 2008-08-30

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-08-30. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    1       MDDQGCPR CKTTKYRNPS LKLMVNVCGH TLCESCVELL FVRGSGSCQE
1g25A     1       mddqgcpr ckttkyrnps lklmvnvcgh tlcescvdll fvrgagncpe
                                                                      
TARGET                                 ssss       ssshhhhhh hhh       
1g25A                                  sss        ssshhhhhh h         


TARGET    49    CDTPLRKSNF KVQLFED                                    
1g25A     49    cgtplrksnf rvqlfed-                                   
                                                                      
TARGET                     sss                                        
1g25A

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: c1a45d4e3f51a06fccdd9b7a5644cc32 on BC2-cluster at Sat Aug 30 14:58:48 2008 
BLAST_TEMPLATE SELECTION SUCCESSFUL TEMPLATES FOUND:  1 BUT STILL ROOM FOR IMPROVEMENT GO TO
HHSEARCH


############# TEMPLATES SELECTED #############

>c1a45d4e3f51a06fccdd9b7a5644cc32
******************************************************************************
>1g25A Evalue:2.18324e-32 SeqID:90.769 Method:BLAST Type:MODEL
****************--------------------------------------------------------------


TEMPLATE ID    START          STOP           METHOD         STATUS         
1g25A          1              65             BLAST          BUILT          

FINISHED PIPELINE ON ID: c1a45d4e3f51a06fccdd9b7a5644cc32 on gopt-74.cluster.bc2.ch BC2-Cluster at
Sat Aug 30 15:01:02 2008


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.