SWISS-MODEL Repository - Model Details

Model Overview
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1
419

Sequence
UniProt P52191
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
IRK

Model 3D Structure
Model information:
Modelled residue range: 168 to 346
Based on template: [ 1u4f ]  
Sequence Identity [%]: 43%
Model date: 2008-08-30
Revision date: 2008-08-30

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-08-30. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    168                ALAKMATA RKRAQTIRFS YFALIGMRDG KLCLMWRIGD
1u4fA     45    srfvkkdghc --nvqfinvg ekrnetlvfs hnaviamrdg klclmwrvgn
                                                                      
TARGET                       sssss         sssss   ssssss   ssssssssss
1u4fA             sss   ss   sssss         sssss   ssssss   ssssssssss


TARGET    206   FRPNHVVEGT VRAQLLRYSE D-SEGRMTMA FKDLKLV--- -NDQIILVTP
1u4fA     217   lrkshlveah vraqllksri tsegeyipld qidinvgfds gidriflvsp
                                                                      
TARGET          s   sss ss sssssss ss s   sss  s ssss         sss     
1u4fA           s   sss ss sssssss ss s   sss  s ssss         sss     


TARGET    251   VTIVHEIDHE SPLYALDRKA VAKDNFEILV TFIYTGDSTG TSHQSRSSYV
1u4fA     267   itivheided splydlskqd idnadfeivv ilegmveata mttqcrssyl
                                                                      
TARGET          sssssss           hhh hhh   ssss sssssss      sssssss 
1u4fA           sssssss           hhh hhh  sssss sssssss      ssssssss


TARGET    301   PREILWGHRF HDVLEVKRKY YKVNCLQFEG SVEVY-APFC SAKQLDW - 
1u4fA     317   aneilwghry epvlfeekhy ykvdysrfhk tyevpntplc sardlaekk 
                                                                      
TARGET            ssssssss s sssss  s sssss    s ssss        hhhhhh   
1u4fA           s ssssssss s sssss  s sssss    s ssss        hhhhhh

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: 0be58d224d469b14a22bed43286b6de7 on BC2-cluster at Sat Aug 30 16:11:42 2008 
NO HITS FOUND IN BLAST-SEARCH FOR SEQID-CUTOFF 60 GO TO HHSEARCH


############# TEMPLATES SELECTED #############

>0be58d224d469b14a22bed43286b6de7
************************************************************************************
>1u4fA Evalue:0 SeqID:43.784 Method:HHSEARCH Type:MODEL
---------------------------------************************************---------------
>1xl4A Evalue:0 SeqID:24.333 Method:HHSEARCH Type:MODEL
------*************-*--************-******************************------------------


TEMPLATE ID    START          STOP           METHOD         STATUS         
1u4fA          168            346            HHSEARCH       BUILT          
1xl4A          33             330            HHSEARCH       BUILT          

FINISHED PIPELINE ON ID: 0be58d224d469b14a22bed43286b6de7 on gopt-56.cluster.bc2.ch BC2-Cluster at
Sat Aug 30 16:15:59 2008


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.