SWISS-MODEL Repository - Model Details

Model Overview
Click on the bars to get more details about individual Models or experimental structures

Sequence
UniProt P56475 Gamma-aminobutyric acid receptor subunit rho-1 (GABA(A) receptor subunit rho-1)
Mus musculus (Mouse).
Database: Swiss-Prot (Reviewed) manually annotated and reviewed

Domain
Link to: [ InterPro ]
Neur_chan_LBD
Neur_chan_memb

Model 3D Structure
Model information:
Modelled residue range: 311 to 370
Based on template: [ 1vry ]  
Sequence Identity [%]: 60%
Model date: 2013-11-24
Revision date: 2013-11-19

Quaternary structure information: [details]
Template (1vry): MONOMER
Model built: SINGLE CHAIN
Model: MONOMER

Ligand information: [details]
Ligands in the template: none.
Ligands in the model: none.
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2013-11-19. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment

TARGET    1       VPARVPLG ITTVLTMSTI ITGVNASMPR VSYIKAVDIY LWVSFVFVFL
1vry_1#3  65533    lparvglg ittvltlttq ssgsraslpk vsyvkaidiw lavcllfvfs
                                                                      
TARGET              hhhhhh hhhhhhhhhh hh         hhhhhh   h hhhhhhhhhh
1vry_1#3            hhhhhh hhhhhhhhhh hh         hhhhhh   h hhhhhhhhhh


TARGET    49    SVLEYAAVNY LT                                         
1vry_1#3  45    alleyaavnf vsr                                        
                                                                      
TARGET          hhhhhhhhhh h                                          
1vry_1#3        hhhhhhhhhh h                                          



Quality


Template's ligands section
Template without ligands.
No ligands were included in the model.


Quaternary Structure Annotation of the Template
1vry is annotated as MONOMER
The template structure (1vry) was solved by NMR and does not contain any quaternary structure annotation
The template is annotated by the number of chains found in the PDB file

Quaternary Structure Modelling of the Target Protein
The target and template sequences are too diverse (seqid: 60.000) to infer a conservation of the oligomeric state
Please use the advancend features of the SwissModel Project Mode

The target structure was calculated as SINGLE CHAIN
Model was succesfully built as MONOMER.


Template Selection
 - Start SMR-Pipeline for:c35168c19a39d8ed32602dc78a7a3765 on BC2-cluster at Sun Nov 24 11:28:43
2013 


 - Analyze BLAST summary ... 
 - Blast template search was successfull, number of templates selected for modeling:  1
 - But still uncovered regions of the target sequence detected, go for: HHSEARCH

 - Run HHSearch to detect more templates...
 - Generate new template library
 - Run template selection against modified template library 
 - Summarize templates: 
 - Skipping oligomeric state prediction due to too many templates for cluster: 88_280
 - Skip Template HHsearch issue
 - Warning: Oligomer Prediction was not successfull!

 - Warning: clustersMergedFile not found
 - Proof template(s) selection compared to previous Repository update
 - Different number of templates selected (old0 vs new:5): model based on new templates
 - Send 5 Templates for modeling

 - @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@
 -                                                     **********
 - building model based on 1vryA (311-370) was successful 
 -                                               ****************
 - building model based on 2m6bA (278-374) was successful 
 -               ************************************************
 - building model based on 3rhwE (85-369) was successful 
 -                                               **********************************
 - building model based on 2m6bA (277-480) was successful 
 -              ********************************************************************
 - building model based on 3rhwC (75-480) was successful 
 - Repository Pipeline parameter

   Cut-off parameters to model the target based on a BLAST target-template alignment
    Evalue :                                     0.0001
    Minimum Template size (aa) for ranking :     25
    Minimum Sequence identity :                  60

   Cut-off parameters to model the target based on a HHSearch target-template alignment
    Evalue :                                     0.0001
    Probability :                                50
    MAC :                                        0.3

   Parameters for model selection
    Minimal number of uncovered target
     residues after BLAST to run HHSEARCH :      50
    Minimal number of uncovered target
     residues to model an additional template :  25
    
 - Finish SMR-Pipeline for:c35168c19a39d8ed32602dc78a7a3765 on BC2-cluster at Sun Nov 24 11:42:33
2013 




Template Description
Match Chain SeqId

1vry: SECOND AND THIRD TRANSMEMBRANE DOMAINS OF THE ALPHA-1 SUBUNIT OF HUMAN GLYCINE RECEPTOR
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

311-370 1vryA 60%
[Model]
311-371 1vryA 59%
[Model]

2m6i: PUTATIVE PENTAMERIC OPEN-CHANNEL STRUCTURE OF FULL-LENGTH TRANSMEMBRANE DOMAINS OF HUMAN GLYCINE RECEPTOR ALPHA1 SU
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

277-480 2m6iD 33%
[Model]
277-480 2m6iC 33%
[Model]
277-480 2m6iB 33%
[Model]
277-480 2m6iE 33%
[Model]
277-480 2m6iA 33%
[Model]

2m6b: STRUCTURE OF FULL-LENGTH TRANSMEMBRANE DOMAINS OF HUMAN GLRECEPTOR ALPHA1 MONOMER SUBUNIT
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

277-480 2m6bA 33%
[Model]

3rhw: C. ELEGANS GLUTAMATE-GATED CHLORIDE CHANNEL (GLUCL) IN COMFAB AND IVERMECTIN
Solved by: X-RAY, Resolution: 3.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

75-480 3rhwC 30%
[Model]
75-479 3rhwE 30%
[Model]
75-479 3rhwA 30%
[Model]
75-479 3rhwD 30%
[Model]
75-479 3rhwB 30%
[Model]

3rif: C. ELEGANS GLUTAMATE-GATED CHLORIDE CHANNEL (GLUCL) IN COMFAB, IVERMECTIN AND GLUTAMATE.
Solved by: X-RAY, Resolution: 3.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

75-480 3rifC 30%
[Model]
75-479 3rifD 30%
[Model]
75-479 3rifB 30%
[Model]
75-479 3rifE 30%
[Model]
75-479 3rifA 30%
[Model]

3ria: C. ELEGANS GLUTAMATE-GATED CHLORIDE CHANNEL (GLUCL) IN COMFAB, IVERMECTIN AND IODIDE.
Solved by: X-RAY, Resolution: 3.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

75-480 3riaC 30%
[Model]
75-479 3riaB 30%
[Model]
75-479 3riaE 30%
[Model]
75-479 3riaA 30%
[Model]
75-479 3riaD 30%
[Model]

3ri5: C. ELEGANS GLUTAMATE-GATED CHLORIDE CHANNEL (GLUCL) IN COMFAB, IVERMECTIN AND PICROTOXIN
Solved by: X-RAY, Resolution: 3.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

75-480 3ri5C 30%
[Model]
75-479 3ri5B 30%
[Model]
75-479 3ri5E 30%
[Model]
75-479 3ri5A 30%
[Model]
75-479 3ri5D 30%
[Model]

2maw: NMR STRUCTURES OF THE ALPHA7 NACHR TRANSMEMBRANE DOMAIN.
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

281-373 2mawA 21%
[Model]

2ksr: NMR STRUCTURES OF TM DOMAIN OF THE N-ACETYLCHOLINE RECEPTO
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

279-373 2ksrA 20%
[Model]

4bon: THE STRUCTURE AND SUPER-ORGANIZATION OF ACETYLCHOLINE RECEPTOR-RAPSYN COMPLEXES CLASS B
Solved by: X-RAY, Resolution: 50.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

74-478 4bonC 13%
[Model]
75-477 4bonE 14%
[Model]
74-478 4bonA 13%
[Model]
74-478 4bonD 13%
[Model]
75-373 4bonB 19%
[Model]

4boi: THE STRUCTURE AND SUPER-ORGANIZATION OF ACETYLCHOLINE RECEPTOR-RAPSYN COMPLEXES CLASS A
Solved by: X-RAY, Resolution: 50.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

74-478 4boiC 13%
[Model]
75-477 4boiE 14%
[Model]
74-478 4boiA 13%
[Model]
74-478 4boiD 13%
[Model]
75-373 4boiB 19%
[Model]

4bog: THE STRUCTURE AND SUPER-ORGANIZATION OF ACETYLCHOLINE RECEPTOR-RAPSYN COMPLEXES
Solved by: X-RAY, Resolution: 50.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

74-478 4bogW 13%
[Model]
74-478 4bogH 13%
[Model]
74-478 4bogR 13%
[Model]
74-478 4bog1 13%
[Model]
74-478 4bogC 13%
[Model]
74-478 4bogM 13%
[Model]
75-477 4bogT 14%
[Model]
75-477 4bog3 14%
[Model]
75-477 4bogE 14%
[Model]
75-477 4bogO 14%
[Model]
75-477 4bogY 14%
[Model]
75-477 4bogJ 14%
[Model]
74-478 4bogI 13%
[Model]
74-478 4bogP 13%
[Model]
74-478 4bogA 13%
[Model]
74-478 4bogS 13%
[Model]
74-478 4bogZ 13%
[Model]
74-478 4bog2 13%
[Model]
74-478 4bogD 13%
[Model]
74-478 4bogK 13%
[Model]
74-478 4bogN 13%
[Model]
74-478 4bogU 13%
[Model]
74-478 4bogF 13%
[Model]
74-478 4bogX 13%
[Model]
75-373 4bog0 19%
[Model]
75-373 4bogB 19%
[Model]
75-373 4bogL 19%
[Model]
75-373 4bogV 19%
[Model]
75-373 4bogG 19%
[Model]
75-373 4bogQ 19%
[Model]

2yks: PENTAMERIC LIGAND GATED ION CHANNEL ELIC MUTANT F246A
Solved by: X-RAY, Resolution: 3.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

97-370 2yksC 19%
[Model]
97-370 2yksJ 19%
[Model]
97-370 2yksF 19%
[Model]
97-370 2yksB 19%
[Model]
97-370 2yksI 19%
[Model]
97-370 2yksE 19%
[Model]
97-370 2yksA 19%
[Model]
97-370 2yksH 19%
[Model]
97-370 2yksD 19%
[Model]
97-370 2yksG 19%
[Model]

4bot: THE STRUCTURE AND SUPER-ORGANIZATION OF ACETYLCHOLINE RECEPTOR-RAPSYN COMPLEXES CLASS E
Solved by: X-RAY, Resolution: 50.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

74-478 4botC 13%
[Model]
75-477 4botE 14%
[Model]
74-478 4botA 13%
[Model]
74-478 4botD 13%
[Model]
75-373 4botB 19%
[Model]

2bg9: REFINED STRUCTURE OF THE NICOTINIC ACETYLCHOLINE RECEPTOR AT 4A RESOLUTION.
Solved by: X-RAY, Resolution: 50.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

74-478 2bg9C 13%
[Model]
75-477 2bg9E 14%
[Model]
74-478 2bg9A 13%
[Model]
74-478 2bg9D 13%
[Model]
75-373 2bg9B 19%
[Model]

4boo: THE STRUCTURE AND SUPER-ORGANIZATION OF ACETYLCHOLINE RECEPTOR-RAPSYN COMPLEXES CLASS C
Solved by: X-RAY, Resolution: 50.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

74-478 4booC 13%
[Model]
75-477 4booE 14%
[Model]
74-478 4booA 13%
[Model]
74-478 4booD 13%
[Model]
75-373 4booB 19%
[Model]

4aq5: GATING MOVEMENT IN ACETYLCHOLINE RECEPTOR ANALYSED BY TIMERESOLVED ELECTRON CRYO-MICROSCOPY (CLOSED CLASS)
Solved by: X-RAY, Resolution: 50.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

74-478 4aq5C 13%
[Model]
75-477 4aq5E 14%
[Model]
74-478 4aq5A 13%
[Model]
74-478 4aq5D 13%
[Model]
75-373 4aq5B 19%
[Model]

2k58: NMR STRUCTURES OF THE FIRST TRANSMEMBRANE DOMAIN OF THE NEURONAL ACETYLCHOLINE RECEPTOR BETA 2 SUBUNIT
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

279-314 2k58B 19%
[Model]

4bor: THE STRUCTURE AND SUPER-ORGANIZATION OF ACETYLCHOLINE RECEPTOR-RAPSYN COMPLEXES CLASS D
Solved by: X-RAY, Resolution: 50.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

74-478 4borC 13%
[Model]
75-477 4borE 14%
[Model]
74-478 4borA 13%
[Model]
74-478 4borD 13%
[Model]
75-373 4borB 19%
[Model]

4aq9: GATING MOVEMENT IN ACETYLCHOLINE RECEPTOR ANALYSED BY TIME-RESOLVED ELECTRON CRYO-MICROSCOPY (OPEN CLASS)
Solved by: X-RAY, Resolution: 50.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

74-478 4aq9C 13%
[Model]
75-477 4aq9E 14%
[Model]
74-478 4aq9D 13%
[Model]
74-478 4aq9A 13%
[Model]
75-373 4aq9B 19%
[Model]

4ila: THE PENTAMERIC LIGAND-GATED ION CHANNEL GLIC A237F IN COMPCESIUM
Solved by: X-RAY, Resolution: 3.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

89-479 4ilaC 18%
[Model]
89-479 4ilaB 18%
[Model]
89-479 4ilaA 18%
[Model]
89-479 4ilaD 18%
[Model]
89-479 4ilaE 18%
[Model]

3ei0: STRUCTURE OF THE E221A MUTANT OF THE GLOEBACTER VIOLACEUS PENTAMERIC LIGAND GATED ION CHANNNEL (GLIC)
Solved by: X-RAY, Resolution: 3.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

91-479 3ei0E 18%
[Model]
91-479 3ei0A 18%
[Model]
91-479 3ei0D 18%
[Model]
91-479 3ei0C 18%
[Model]
91-479 3ei0B 18%
[Model]

3uq7: X-RAY STRUCTURE OF A PENTAMERIC LIGAND GATED ION CHANNEL FCHRYSANTHEMI (ELIC) MUTANT L240S F247L (L9S F16L) IN PRESMM CYSTEAMINE
Solved by: X-RAY, Resolution: 3.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

97-370 3uq7E 18%
[Model]
97-370 3uq7A 18%
[Model]
97-370 3uq7H 18%
[Model]
97-370 3uq7D 18%
[Model]
97-370 3uq7G 18%
[Model]
97-370 3uq7C 18%
[Model]
97-370 3uq7J 18%
[Model]
97-370 3uq7F 18%
[Model]
97-370 3uq7B 18%
[Model]
97-370 3uq7I 18%
[Model]

4lmj: GLIC LIGANDED-CLOSED-CHANNEL CONFORMATION, MUTANT T25'A
Solved by: X-RAY, Resolution: 3.44A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

91-479 4lmjC 18%
[Model]
91-479 4lmjB 18%
[Model]
91-479 4lmjE 18%
[Model]
91-479 4lmjA 18%
[Model]
91-479 4lmjD 18%
[Model]

3p50: STRUCTURE OF PROPOFOL BOUND TO A PENTAMERIC LIGAND-GATED IGLIC
Solved by: X-RAY, Resolution: 3.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

89-479 3p50B 18%
[Model]
89-479 3p50E 18%
[Model]
89-479 3p50A 18%
[Model]
89-479 3p50D 18%
[Model]
89-479 3p50C 18%
[Model]

4ire: CRYSTAL STRUCTURE OF GLIC WITH MUTATIONS AT THE LOOP C REG
Solved by: X-RAY, Resolution: 3.19A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

89-479 4ireE 18%
[Model]
89-479 4ireB 18%
[Model]
89-479 4ireD 18%
[Model]
89-479 4ireA 18%
[Model]
89-479 4ireC 18%
[Model]

2lm2: NMR STRUCTURES OF THE TRANSMEMBRANE DOMAINS OF THE ACHR B2
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

278-373 2lm2A 18%
[Model]

4a98: X-RAY STRUCTURE OF A PENTAMERIC LIGAND GATED ION CHANNEL FROM ERWINIA CHRYSANTHEMI (ELIC) IN COMPLEX WITH BROMOFLURAZEPAM
Solved by: X-RAY, Resolution: 3.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

97-370 4a98A 18%
[Model]
97-370 4a98H 18%
[Model]
97-370 4a98D 18%
[Model]
97-370 4a98G 18%
[Model]
97-370 4a98C 18%
[Model]
97-370 4a98J 18%
[Model]
97-370 4a98F 18%
[Model]
97-370 4a98B 18%
[Model]
97-370 4a98I 18%
[Model]
97-370 4a98E 18%
[Model]

4hfe: THE GLIC PENTAMERIC LIGAND-GATED ION CHANNEL F14'A ETHANOLMUTANT COMPLEXED TO ETHANOL
Solved by: X-RAY, Resolution: 3.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

89-479 4hfeE 18%
[Model]
89-479 4hfeA 18%
[Model]
89-479 4hfeD 18%
[Model]
89-479 4hfeC 18%
[Model]
89-479 4hfeB 18%
[Model]

3uq4: X-RAY STRUCTURE OF A PENTAMERIC LIGAND GATED ION CHANNEL FCHRYSANTHEMI (ELIC) MUTANT F247L (F16L)
Solved by: X-RAY, Resolution: 3.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

97-370 3uq4I 18%
[Model]
97-370 3uq4E 18%
[Model]
97-370 3uq4A 18%
[Model]
97-370 3uq4H 18%
[Model]
97-370 3uq4D 18%
[Model]
97-370 3uq4G 18%
[Model]
97-370 3uq4C 18%
[Model]
97-370 3uq4J 18%
[Model]
97-370 3uq4F 18%
[Model]
97-370 3uq4B 18%
[Model]

4lml: GLIC DOUBLE MUTANT I9'A T25'A
Solved by: X-RAY, Resolution: 3.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

91-479 4lmlD 18%
[Model]
91-479 4lmlC 18%
[Model]
91-479 4lmlB 18%
[Model]
91-479 4lmlE 18%
[Model]
91-479 4lmlA 18%
[Model]

4ilc: THE GLIC PENTAMERIC LIGAND-GATED ION CHANNEL IN COMPLEX WI
Solved by: X-RAY, Resolution: 3.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

89-479 4ilcD 18%
[Model]
89-479 4ilcC 18%
[Model]
89-479 4ilcB 18%
[Model]
89-479 4ilcE 18%
[Model]
89-479 4ilcA 18%
[Model]

3tlt: THE GLIC PENTAMERIC LIGAND-GATED ION CHANNEL H11'F MUTANT LOCALLY-CLOSED CONFORMATION (LC1 SUBTYPE)
Solved by: X-RAY, Resolution: 3.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

89-479 3tltE 18%
[Model]
89-479 3tltA 18%
[Model]
89-479 3tltD 18%
[Model]
89-479 3tltC 18%
[Model]
89-479 3tltB 18%
[Model]

2xq8: PENTAMERIC LIGAND GATED ION CHANNEL GLIC IN COMPLEX WITH ZION (ZN2+)
Solved by: X-RAY, Resolution: 3.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

91-479 2xq8E 18%
[Model]
91-479 2xq8A 18%
[Model]
91-479 2xq8D 18%
[Model]
91-479 2xq8C 18%
[Model]
91-479 2xq8B 18%
[Model]

1ux2: X-RAY STRUCTURE OF ACETYLCHOLINE BINDING PROTEIN (ACHBP)
Solved by: X-RAY, Resolution: 2.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

78-281 1ux2A 17%
[Model]
78-281 1ux2H 17%
[Model]
78-281 1ux2D 17%
[Model]
78-281 1ux2C 17%
[Model]
78-281 1ux2F 17%
[Model]
78-281 1ux2B 18%
[Model]
78-281 1ux2I 18%
[Model]
78-281 1ux2E 18%
[Model]
78-281 1ux2G 18%
[Model]
78-281 1ux2J 18%
[Model]

3uu5: THE GLIC PENTAMERIC LIGAND-GATED ION CHANNEL LOOP2-20' MUTIN SOLUTION
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

89-479 3uu5D 18%
[Model]
89-479 3uu5C 18%
[Model]
89-479 3uu5B 18%
[Model]
89-479 3uu5E 18%
[Model]
89-479 3uu5A 18%
[Model]

4il4: THE PENTAMERIC LIGAND-GATED ION CHANNEL GLIC IN COMPLEX WI
Solved by: X-RAY, Resolution: 3.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

89-479 4il4D 18%
[Model]
89-479 4il4C 18%
[Model]
89-479 4il4B 18%
[Model]
89-479 4il4E 18%
[Model]
89-479 4il4A 18%
[Model]

4hfc: THE GLIC PENTAMERIC LIGAND-GATED ION CHANNEL F14'A ETHANOLMUTANT COMPLEXED TO 2-BROMO-ETHANOL
Solved by: X-RAY, Resolution: 3.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

89-479 4hfcD 18%
[Model]
89-479 4hfcC 18%
[Model]
89-479 4hfcB 18%
[Model]
89-479 4hfcE 18%
[Model]
89-479 4hfcA 18%
[Model]

2lly: NMR STRUCTURES OF THE TRANSMEMBRANE DOMAINS OF THE NACHR A
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

279-374 2llyA 18%
[Model]

3tlu: THE GLIC PENTAMERIC LIGAND-GATED ION CHANNEL LOOP2-24' OXIIN A LOCALLY-CLOSED CONFORMATION (LC1 SUBTYPE)
Solved by: X-RAY, Resolution: 3.25A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

89-479 3tluC 18%
[Model]
89-479 3tluB 18%
[Model]
89-479 3tluE 18%
[Model]
89-479 3tluA 18%
[Model]
89-479 3tluD 18%
[Model]

3uub: THE GLIC PENTAMERIC LIGAND-GATED ION CHANNEL LOOP2-21' MUTIN SOLUTION
Solved by: X-RAY, Resolution: 3.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

89-479 3uubG 18%
[Model]
89-479 3uubC 18%
[Model]
89-479 3uubJ 18%
[Model]
89-479 3uubF 18%
[Model]
89-479 3uubB 18%
[Model]
89-479 3uubI 18%
[Model]
89-479 3uubE 18%
[Model]
89-479 3uubA 18%
[Model]
89-479 3uubH 18%
[Model]
89-479 3uubD 18%
[Model]

3eam: AN OPEN-PORE STRUCTURE OF A BACTERIAL PENTAMERIC LIGAND- GATED ION CHANNEL
Solved by: X-RAY, Resolution: 3.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

89-479 3eamD 18%
[Model]
89-479 3eamC 18%
[Model]
89-479 3eamB 18%
[Model]
89-479 3eamE 18%
[Model]
89-479 3eamA 18%
[Model]

4a97: X-RAY STRUCTURE OF A PENTAMERIC LIGAND GATED ION CHANNEL FROM ERWINIA CHRYSANTHEMI (ELIC) IN COMPLEX WITH ZOPICLON
Solved by: X-RAY, Resolution: 3.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

97-370 4a97F 18%
[Model]
97-370 4a97B 18%
[Model]
97-370 4a97I 18%
[Model]
97-370 4a97E 18%
[Model]
97-370 4a97A 18%
[Model]
97-370 4a97H 18%
[Model]
97-370 4a97D 18%
[Model]
97-370 4a97G 18%
[Model]
97-370 4a97C 18%
[Model]
97-370 4a97J 18%
[Model]

3uu8: THE GLIC PENTAMERIC LIGAND-GATED ION CHANNEL LOOP2-24' MUTIN SOLUTION
Solved by: X-RAY, Resolution: 3.25A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

89-479 3uu8C 18%
[Model]
89-479 3uu8B 18%
[Model]
89-479 3uu8E 18%
[Model]
89-479 3uu8A 18%
[Model]
89-479 3uu8D 18%
[Model]

4hfh: THE GLIC PENTAMERIC LIGAND-GATED ION CHANNEL (WILD-TYPE) CBROMOFORM
Solved by: X-RAY, Resolution: 3.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

89-479 4hfhA 18%
[Model]
89-479 4hfhD 18%
[Model]
89-479 4hfhC 18%
[Model]
89-479 4hfhB 18%
[Model]
89-479 4hfhE 18%
[Model]

3tlw: THE GLIC PENTAMERIC LIGAND-GATED ION CHANNEL LOOP2-21' OXIIN A LOCALLY-CLOSED CONFORMATION (LC2 SUBTYPE)
Solved by: X-RAY, Resolution: 3.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

89-479 3tlwD 18%
[Model]
89-479 3tlwC 18%
[Model]
89-479 3tlwB 18%
[Model]
89-479 3tlwE 18%
[Model]
89-479 3tlwA 18%
[Model]

2xq4: PENTAMERIC LIGAND GATED ION CHANNEL GLIC IN COMPLEX WITH TETRAMETHYLARSONIUM (TMAS)
Solved by: X-RAY, Resolution: 3.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

91-479 2xq4C 18%
[Model]
91-479 2xq4B 18%
[Model]
91-479 2xq4E 18%
[Model]
91-479 2xq4A 18%
[Model]
91-479 2xq4D 18%
[Model]

2yoe: X-RAY STRUCTURE OF A PENTAMERIC LIGAND GATED ION CHANNEL FROM ERWINIA CHRYSANTHEMI (ELIC) IN COMPLEX WITH GABA ANDFLURAZEPAM
Solved by: X-RAY, Resolution: 3.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

97-370 2yoeD 18%
[Model]
97-370 2yoeG 18%
[Model]
97-370 2yoeC 18%
[Model]
97-370 2yoeJ 18%
[Model]
97-370 2yoeF 18%
[Model]
97-370 2yoeB 18%
[Model]
97-370 2yoeI 18%
[Model]
97-370 2yoeE 18%
[Model]
97-370 2yoeA 18%
[Model]
97-370 2yoeH 18%
[Model]

4ilb: THE PENTAMERIC LIGAND-GATED ION CHANNEL GLIC A237F IN COMPRUBIDIUM
Solved by: X-RAY, Resolution: 3.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

89-479 4ilbB 18%
[Model]
89-479 4ilbE 18%
[Model]
89-479 4ilbA 18%
[Model]
89-479 4ilbD 18%
[Model]
89-479 4ilbC 18%
[Model]

1uw6: X-RAY STRUCTURE OF ACETYLCHOLINE BINDING PROTEIN (ACHBP) ICOMPLEX WITH NICOTINE
Solved by: X-RAY, Resolution: 2.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

78-283 1uw6F 17%
[Model]
78-283 1uw6M 17%
[Model]
78-283 1uw6T 17%
[Model]
78-283 1uw6A 17%
[Model]
78-283 1uw6D 17%
[Model]
78-283 1uw6R 17%
[Model]
78-283 1uw6N 17%
[Model]
78-281 1uw6C 18%
[Model]
78-281 1uw6J 18%
[Model]
78-281 1uw6Q 18%
[Model]
78-281 1uw6B 18%
[Model]
78-281 1uw6I 18%
[Model]
78-281 1uw6P 18%
[Model]
78-281 1uw6E 18%
[Model]
78-281 1uw6L 18%
[Model]
78-281 1uw6S 18%
[Model]
78-281 1uw6H 18%
[Model]
78-281 1uw6O 18%
[Model]
78-281 1uw6K 18%
[Model]
78-281 1uw6G 18%
[Model]

3tlv: THE GLIC PENTAMERIC LIGAND-GATED ION CHANNEL LOOP2-22' OXIIN A LOCALLY-CLOSED CONFORMATION (LC3 SUBTYPE)
Solved by: X-RAY, Resolution: 2.98A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

89-479 3tlvB 18%
[Model]
89-479 3tlvE 18%
[Model]
89-479 3tlvA 18%
[Model]
89-479 3tlvD 18%
[Model]
89-479 3tlvC 18%
[Model]

3igq: CRYSTAL STRUCTURE OF THE EXTRACELLULAR DOMAIN OF A BACTERIPENTAMERIC LIGAND-GATED ION CHANNEL
Solved by: X-RAY, Resolution: 2.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

89-281 3igqB 18%
[Model]
90-281 3igqC 19%
[Model]
89-281 3igqF 19%
[Model]
89-281 3igqE 19%
[Model]
89-281 3igqD 18%
[Model]
89-281 3igqA 18%
[Model]

2xq9: PENTAMERIC LIGAND GATED ION CHANNEL GLIC MUTANT E221A IN CTETRAETHYLARSONIUM (TEAS)
Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

91-479 2xq9D 18%
[Model]
91-479 2xq9C 18%
[Model]
91-479 2xq9B 18%
[Model]
91-479 2xq9E 18%
[Model]
91-479 2xq9A 18%
[Model]

3lsv: STRUCTURE OF THE A237F MUTANT OF THE PENTAMERIC LIGAND GATCHANNEL FROM GLOEOBACTER VIOLACEUS
Solved by: X-RAY, Resolution: 3.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

89-479 3lsvD 18%
[Model]
89-479 3lsvC 18%
[Model]
89-479 3lsvB 18%
[Model]
89-479 3lsvE 18%
[Model]
89-479 3lsvA 18%
[Model]

2xq3: PENTAMERIC LIGAND GATED ION CHANNEL GLIC IN COMPLEX WITH BR-LIDOCAINE
Solved by: X-RAY, Resolution: 3.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

91-479 2xq3E 18%
[Model]
91-479 2xq3A 18%
[Model]
91-479 2xq3D 18%
[Model]
91-479 2xq3C 18%
[Model]
91-479 2xq3B 18%
[Model]

3uu4: THE GLIC PENTAMERIC LIGAND-GATED ION CHANNEL LOOP2-21' MUTIN THE CRYSTAL IN A LOCALLY-CLOSED CONFORMATION (LC1 SUBT
Solved by: X-RAY, Resolution: 3.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

89-479 3uu4B 18%
[Model]
89-479 3uu4E 18%
[Model]
89-479 3uu4A 18%
[Model]
89-479 3uu4D 18%
[Model]
89-479 3uu4C 18%
[Model]

4f8h: X-RAY STRUCTURE OF THE ANESTHETIC KETAMINE BOUND TO THE GLPENTAMERIC LIGAND-GATED ION CHANNEL
Solved by: X-RAY, Resolution: 3.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

89-479 4f8hB 18%
[Model]
89-479 4f8hE 18%
[Model]
89-479 4f8hA 18%
[Model]
89-479 4f8hD 18%
[Model]
89-479 4f8hC 18%
[Model]

2yn6: PENTAMERIC LIGAND-GATED ION CHANNEL ELIC IN COMPLEX WITH BARIUM
Solved by: X-RAY, Resolution: 3.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

97-370 2yn6C 18%
[Model]
97-370 2yn6B 18%
[Model]
97-370 2yn6E 18%
[Model]
97-370 2yn6A 18%
[Model]
97-370 2yn6D 18%
[Model]

4hfd: THE GLIC PENTAMERIC LIGAND-GATED ION CHANNEL F14'A ETHANOLMUTANT COMPLEXED TO BROMOFORM
Solved by: X-RAY, Resolution: 3.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

89-479 4hfdC 18%
[Model]
89-479 4hfdB 18%
[Model]
89-479