SWISS-MODEL Repository - Model Details

Model Overview
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1
362

Sequence
UniProt P56485 Atypical chemokine receptor 3 (C-X-C chemokine receptor type 7)
Mus musculus (Mouse).
Database: Swiss-Prot (Reviewed) manually annotated and reviewed

STRING
P56485: 10090.ENSMUSP000

Domain
Link to: [ InterPro ]
7tm_1

Model 3D Structure
Model information:
Modelled residue range: 248 to 318
Based on template: [ 3oe8 ]  
Sequence Identity [%]: 36%
Model date: 2013-11-24
Revision date: 2013-11-19

Quaternary structure information: [details]
Template (3oe8): TRIMER
Model built: SINGLE CHAIN

Ligand information: [details]
Ligands in the template: ITD: 1.
Ligands in the model: none.
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2013-11-19. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment

                                                       
3oe8A     27    pcnfnkiflp tiysiifltg ivgnglvilv mgyqkklrsm tdkyrlhlsv
                                                                      
                                                       
3oe8A               hhhhhh hhhhhhhhhh hhhhhhhhhh hhh      h hhhhhhhhhh


                                                       
3oe8A     83    adllfvitlp fwavdavanw yfgnflckav hviytvnlys svwilafisl
                                                                      
                                                       
3oe8A           hhhhh   hh hhhhhhh        hhhhhh hhhhhhhhhh hhhhhhhhhh


                                                       
3oe8A     133   drylaivhat nsqrprklla ekvvyvgvwi pallltipdf ifanvseadd
                                                                      
                                                       
3oe8A           hhhhhhh       hhhhhhh hhhhhhhhhh hhhh   hhh hsssssss  


                                                       
3oe8A     183   ryicdrfypn dlwvvvfqfq himvglilpg ivilscycii isklshsgsn
                                                                      
                                                       
3oe8A           sssssss     hhhhhhhhh hhhhhhhhhh hhhhhhhhhh           


                                                       
3oe8A     1003  ifemlrideg lrlkiykdte gyytigighl ltkspslnaa kseldkaigr
                                                                      
                                                       
3oe8A             hhhhhh     ssssss    ssss   ss s     hhhh hhhhhhhh  


                                                       
3oe8A     1053  ntngvitkde aeklfnqdvd aavrgilrna klkpvydsld avrraalinm
                                                                      
                                                       
3oe8A              sss hhh hhhhhhhhhh hhh          hhhh   h hhhhhhhhhh


                                                       
3oe8A     1103  vfqmgetgva gftnslrmlq qkrwdeaavn laksrwynqt pnrakrvitt
                                                                      
                                                       
3oe8A           hhh   hhhh    hhhhhh    hhhhhhhh hh   hhh    hhhhhhhhh


TARGET    1                 HSSRKIIFS YVV---VFLV CWLPYHFVVL LDIFSILHYI
3oe8A     1153  frtgtwday- -hqkrkalkt tvililaffa cwlpyyigis idsfilleii
                                                                      
TARGET                        hhhhhhh         hh hhhhhhhhhh hhhhhhh   
3oe8A           hhh           hhhhhhh hhhhhhhhhh hhhhhhhhhh hhhhhhh   


TARGET    37    PFTCQLENVL FTALHVTQCL SLVHCCVNPV LYSFI                
3oe8A     271   kqgcefentv hkwisiteal affhcclnpi lyafl-               
                                                                      
TARGET              hhhhhh hhhhhhhhhh hhhhhhhhhh hhhh                 
3oe8A               hhhhhh hhhhhhhhhh h   hhhhhh hhhh                 



Quality


Template's ligands section
Ligands in the template: ITD: 1.
The template contains ligands that are not yet part of the pipeline. Ligands which are currently assessed are listed in the help page.
No ligands were included in the model.


Quaternary Structure Annotation of the Template
3oe8 is annotated as TRIMER
PISA was used to annotate the quaternary structure, because the author assignment was not complete
The template was built based on the following PISA annotation file: 3oe8_assembly.xml.gz

Quaternary Structure Modelling of the Target Protein
Analysis of evolutionary and family specific aspects revealed non-conservation of the oligomeric structure
Hence, the oligomeric structures of the target and the template cannot be assumed to be similar (=TRIMER)
The target structure was calculated as SINGLE CHAIN
The corresponding reliability score is 0 (>0.5 indicates similarity)
To build the complex the following chains of the complex has been additionally identified: 3oe8C 3oe8B


Template Selection
 - Start SMR-Pipeline for:696e426b6811da0f95cc7de9f48c8b68 on BC2-cluster at Sun Nov 24 10:27:27
2013 


 - Analyze BLAST summary ... 
 - No templates found with BLAST (seqid-cutoff: 60): go to HHSEARCH

 - Run HHSearch to detect more templates...
 - Generate new template library
 - Run template selection against modified template library 
 - Summarize templates: 
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with A found
 - No template with A found
 - No template with B found
 - No template with G found
 - No template with N found
 - No template with A found
 - No template with B found
 - No template with G found
 - No template with N found
 - No template with I found
 - No template with I found
 - No template with I found
 - No template with I found
 - No template with I found
 - No template with I found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with C found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with L found
 - No template with H found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with L found
 - No template with H found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with L found
 - No template with H found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with A found
 - No template with C found
 - No template with A found
 - No template with C found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with C found
 - No template with B found
 - No template with B found
 - Proof template(s) selection compared to previous Repository update
 - Different number of templates selected (old0 vs new:2): model based on new templates
 - Send 2 Templates for modeling

 - @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@
 -                                                        ****************
 - building model based on 3oe8A (248-318) was successful 
 -           ***************************************************************
 - building model based on 2lnlA (45-328) was successful 
 - Repository Pipeline parameter

   Cut-off parameters to model the target based on a BLAST target-template alignment
    Evalue :                                     0.0001
    Minimum Template size (aa) for ranking :     25
    Minimum Sequence identity :                  60

   Cut-off parameters to model the target based on a HHSearch target-template alignment
    Evalue :                                     0.0001
    Probability :                                50
    MAC :                                        0.3

   Parameters for model selection
    Minimal number of uncovered target
     residues after BLAST to run HHSEARCH :      50
    Minimal number of uncovered target
     residues to model an additional template :  25
    
 - Finish SMR-Pipeline for:696e426b6811da0f95cc7de9f48c8b68 on BC2-cluster at Sun Nov 24 10:37:25
2013 




Template Description
Match Chain SeqId

1hof: NMR STRUCTURE OF T3-I2, A 32 RESIDUE PEPTIDE FROM THE ALPH2A ADRENERGIC RECEPTOR
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

129-160 1hofA 31%
[Model]

1hll: NMR STRUCTURE OF T3-I2, A 32 RESIDUE PEPTIDE FROM THE ALPH2A ADRENERGIC RECEPTOR
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

129-160 1hllA 31%
[Model]

2lnl: STRUCTURE OF HUMAN CXCR1 IN PHOSPHOLIPID BILAYERS
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

38-333 2lnlA 30%
[Model]

1fdf: HELIX 7 BOVINE RHODOPSIN
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

304-324 1fdfA 29%
[Model]

1ho9: BEST 20 NMR CONFORMERS OF D130I MUTANT T3-I2, A 32 RESIDUEPEPTIDE FROM THE ALPHA 2A ADRENERGIC RECEPTOR
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

129-160 1ho9A 28%
[Model]

1hod: NMR STRUCTURE OF D130I MUTANT T3-I2, A 32 RESIDUE PEPTIDE FROM THE ALPHA 2A ADRENERGIC RECEPTOR
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

129-160 1hodA 28%
[Model]

4ea3: STRUCTURE OF THE N/OFQ OPIOID RECEPTOR IN COMPLEX WITH A PMIMETIC
Solved by: X-RAY, Resolution: 3.01A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-329 4ea3B 25%
[Model]
43-327 4ea3A 25%
[Model]

2koe: HUMAN CANNABINOID RECEPTOR 1 - HELIX 7/8 PEPTIDE
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

299-333 2koeA 23%
[Model]

4mbs: CRYSTAL STRUCTURE OF THE CCR5 CHEMOKINE RECEPTOR
Solved by: X-RAY, Resolution: 2.71A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

33-331 4mbsB 23%
[Model]
33-331 4mbsA 23%
[Model]

2ksb: SUBSTANCE P IN ISOTROPIC Q=0.25 DMPC/CHAPS/GM1 BICELLES ASFOR NK1R
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

40-340 2ksbA 22%
[Model]

2lov: AR55 SOLUBILISED IN LPPG MICELLES
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-77 2lovA 22%
[Model]

2ks9: SOLUTION CONFORMATION OF SUBSTANCE P IN WATER COMPLEXED WI
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

40-340 2ks9A 22%
[Model]

2ksa: SUBSTANCE P IN DMPC/CHAPS ISOTROPIC Q=0.25 BICELLES AS A LNK1R
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

40-340 2ksaA 22%
[Model]

2low: SOLUTION STRUCTURE OF AR55 IN 50% HFIP
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-77 2lowA 22%
[Model]

2lou: AR55 SOLUBILISED IN DPC MICELLES
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-77 2louA 22%
[Model]

2lot: AR55 SOLUBILISED IN SDS MICELLES
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-77 2lotA 22%
[Model]

3aym: CRYSTAL STRUCTURE OF THE BATHO INTERMEDIATE OF SQUID RHODO
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

38-358 3aymA 21%
[Model]
38-354 3aymB 21%
[Model]

2z73: CRYSTAL STRUCTURE OF SQUID RHODOPSIN
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

38-358 2z73A 21%
[Model]
38-354 2z73B 21%
[Model]

2ziy: CRYSTAL STRUCTURE OF SQUID RHODOPSIN
Solved by: X-RAY, Resolution: 3.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

34-359 2ziyA 21%
[Model]

3ayn: CRYSTAL STRUCTURE OF SQUID ISORHODOPSIN
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

38-358 3aynA 21%
[Model]
38-354 3aynB 21%
[Model]

3oe9: CRYSTAL STRUCTURE OF THE CHEMOKINE CXCR4 RECEPTOR IN COMPLSMALL MOLECULE ANTAGONIST IT1T IN P1 SPACEGROUP
Solved by: X-RAY, Resolution: 3.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

43-316 3oe9B 19%
[Model]
43-316 3oe9A 20%
[Model]

4gpo: OLIGOMEIC TURKEY BETA1-ADRENERGIC G PROTEIN-COUPLED RECEPT
Solved by: X-RAY, Resolution: 3.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

44-329 4gpoA 19%
[Model]
44-329 4gpoB 19%
[Model]

2vt4: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND CYANOPINDOLOL
Solved by: X-RAY, Resolution: 2.7A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

46-330 2vt4A 19%
[Model]
46-332 2vt4B 19%
[Model]
46-317 2vt4C 19%
[Model]
46-330 2vt4D 19%
[Model]

3oe0: CRYSTAL STRUCTURE OF THE CXCR4 CHEMOKINE RECEPTOR IN COMPLCYCLIC PEPTIDE ANTAGONIST CVX15
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

33-316 3oe0A 19%
[Model]

3oe6: CRYSTAL STRUCTURE OF THE CXCR4 CHEMOKINE RECEPTOR IN COMPLSMALL MOLECULE ANTAGONIST IT1T IN I222 SPACEGROUP
Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

43-325 3oe6A 19%
[Model]

3odu: THE 2.5 A STRUCTURE OF THE CXCR4 CHEMOKINE RECEPTOR IN COMSMALL MOLECULE ANTAGONIST IT1T
Solved by: X-RAY, Resolution: 2.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

35-335 3oduA 19%
[Model]
39-330 3oduB 19%
[Model]

4ldo: STRUCTURE OF BETA2 ADRENOCEPTOR BOUND TO ADRENALINE AND ANNANOBODY
Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-331 4ldoA 18%
[Model]

2ycz: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONBOUND ANTAGONIST IODOCYANOPINDOLOL
Solved by: X-RAY, Resolution: 3.65A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

46-332 2yczA 18%
[Model]
46-332 2yczB 18%
[Model]

4lde: STRUCTURE OF BETA2 ADRENOCEPTOR BOUND TO BI167107 AND AN ENANOBODY
Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-331 4ldeA 18%
[Model]

2ycx: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND ANTAGONIST CYANOPINDOLOL
Solved by: X-RAY, Resolution: 3.25A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

46-327 2ycxA 18%
[Model]
46-330 2ycxB 18%
[Model]

2ycy: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND ANTAGONIST CYANOPINDOLOL
Solved by: X-RAY, Resolution: 3.15A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

46-332 2ycyA 18%
[Model]
46-332 2ycyB 18%
[Model]

2ycw: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND ANTAGONIST CARAZOLOL
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

43-332 2ycwA 18%
[Model]
43-332 2ycwB 18%
[Model]

3oe8: CRYSTAL STRUCTURE OF THE CXCR4 CHEMOKINE RECEPTOR IN COMPLSMALL MOLECULE ANTAGONIST IT1T IN P1 SPACEGROUP
Solved by: X-RAY, Resolution: 3.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

43-318 3oe8A 19%
[Model]
43-318 3oe8C 19%
[Model]
42-317 3oe8B 18%
[Model]

2y01: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND PARTIAL AGONIST DOBUTAMINE (CRYSTAL DOB102)
Solved by: X-RAY, Resolution: 3.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-330 2y01A 18%
[Model]
44-330 2y01B 18%
[Model]

2y04: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND PARTIAL AGONIST SALBUTAMOL
Solved by: X-RAY, Resolution: 3.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-330 2y04A 18%
[Model]
44-330 2y04B 18%
[Model]

2y02: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND AGONIST CARMOTEROL
Solved by: X-RAY, Resolution: 3.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-330 2y02A 18%
[Model]
44-330 2y02B 18%
[Model]

3zpr: THERMOSTABILISED TURKEY BETA1 ADRENERGIC RECEPTOR WITH 4- METHYL-2-(PIPERAZIN-1-YL) QUINOLINE BOUND
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

44-330 3zprA 19%
[Model]
44-330 3zprB 18%
[Model]

2y03: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND AGONIST ISOPRENALINE
Solved by: X-RAY, Resolution: 3.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

44-330 2y03A 18%
[Model]
44-330 2y03B 18%
[Model]

3zpq: THERMOSTABILISED TURKEY BETA1 ADRENERGIC RECEPTOR WITH 4-(PIPERAZIN-1-YL)-1H-INDOLE BOUND (COMPOUND 19)
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-330 3zpqA 18%
[Model]
42-330 3zpqB 18%
[Model]

4amj: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND BIASED AGONIST CARVEDILOL
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-330 4amjA 18%
[Model]
42-330 4amjB 18%
[Model]

4ami: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND BIASED AGONIST BUCINDOLOL
Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

44-330 4amiA 19%
[Model]
44-330 4amiB 18%
[Model]

4ldl: STRUCTURE OF BETA2 ADRENOCEPTOR BOUND TO HYDROXYBENZYLISOPAND AN ENGINEERED NANOBODY
Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-331 4ldlA 18%
[Model]

2y00: TURKEY BETA1 ADRENERGIC RECEPTOR WITH STABILISING MUTATIONAND BOUND PARTIAL AGONIST DOBUTAMINE (CRYSTAL DOB92)
Solved by: X-RAY, Resolution: 3.05A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-330 2y00A 18%
[Model]
44-330 2y00B 18%
[Model]

3sn6: CRYSTAL STRUCTURE OF THE BETA2 ADRENERGIC RECEPTOR-GS PROT
Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

44-331 3sn6R 17%
[Model]

4djh: STRUCTURE OF THE HUMAN KAPPA OPIOID RECEPTOR IN COMPLEX WI
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

44-331 4djhB 17%
[Model]
44-331 4djhA 16%
[Model]

3rfm: THERMOSTABILISED ADENOSINE A2A RECEPTOR IN COMPLEX WITH CA
Solved by: X-RAY, Resolution: 3.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

48-331 3rfmA 16%
[Model]

3uzc: THERMOSTABILISED ADENOSINE A2A RECEPTOR IN COMPLEX WITH 4-PHENYL-1,2,4-TRIAZIN-6-YL)-2-CHLOROPHENOL
Solved by: X-RAY, Resolution: 3.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

48-331 3uzcA 16%
[Model]

4ej4: STRUCTURE OF THE DELTA OPIOID RECEPTOR BOUND TO NALTRINDOL
Solved by: X-RAY, Resolution: 3.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

40-324 4ej4A 16%
[Model]

3kj6: CRYSTAL STRUCTURE OF A METHYLATED BETA2 ADRENERGIC RECEPTOFAB COMPLEX
Solved by: X-RAY, Resolution: 3.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

47-335 3kj6A 16%
[Model]

3vga: CRYSTAL STRUCTURE OF HUMAN ADENOSINE A2A RECEPTOR WITH AN INVERSE-AGONIST ANTIBODY AT 3.1 A RESOLUTION
Solved by: X-RAY, Resolution: 3.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

47-334 3vgaA 16%
[Model]

3pwh: THERMOSTABILISED ADENOSINE A2A RECEPTOR
Solved by: X-RAY, Resolution: 3.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

48-331 3pwhA 16%
[Model]

2ydo: THERMOSTABILISED HUMAN A2A RECEPTOR WITH ADENOSINE BOUND
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

47-347 2ydoA 16%
[Model]

4dkl: CRYSTAL STRUCTURE OF THE MU-OPIOID RECEPTOR BOUND TO A MORANTAGONIST
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

44-330 4dklA 16%
[Model]

3rey: THERMOSTABILISED ADENOSINE A2A RECEPTOR IN COMPLEX WITH XA
Solved by: X-RAY, Resolution: 3.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

48-331 3reyA 16%
[Model]

1f88: CRYSTAL STRUCTURE OF BOVINE RHODOPSIN
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-336 1f88A 15%
[Model]
41-334 1f88B 16%
[Model]

3vg9: CRYSTAL STRUCTURE OF HUMAN ADENOSINE A2A RECEPTOR WITH AN INVERSE-AGONIST ANTIBODY AT 2.7 A RESOLUTION
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

47-336 3vg9A 16%
[Model]

3uza: THERMOSTABILISED ADENOSINE A2A RECEPTOR IN COMPLEX WITH 6-DIMETHYLPYRIDIN-4-YL)-5-PHENYL-1,2,4-TRIAZIN-3-AMINE
Solved by: X-RAY, Resolution: 3.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

48-331 3uzaA 16%
[Model]

4a4m: CRYSTAL STRUCTURE OF THE LIGHT-ACTIVATED CONSTITUTIVELY ACN2C,M257Y,D282C RHODOPSIN MUTANT IN COMPLEX WITH A PEPTIDRESEMBLING THE C-TERMINUS OF THE GALPHA-PROTEIN SUBUNIT (
Solved by: X-RAY, Resolution: 3.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-334 4a4mA 16%
[Model]

2ydv: THERMOSTABILISED HUMAN A2A RECEPTOR WITH NECA BOUND
Solved by: X-RAY, Resolution: 2.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

45-347 2ydvA 16%
[Model]

3pqr: CRYSTAL STRUCTURE OF METARHODOPSIN II IN COMPLEX WITH A C-PEPTIDE DERIVED FROM THE GALPHA SUBUNIT OF TRANSDUCIN
Solved by: X-RAY, Resolution: 4.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-334 3pqrA 15%
[Model]

3c9l: STRUCTURE OF GROUND-STATE BOVINE RHODOSPIN IN A HEXAGONAL CRYSTAL FORM
Solved by: X-RAY, Resolution: 3.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-335 3c9lA 15%
[Model]

3cap: CRYSTAL STRUCTURE OF NATIVE OPSIN: THE G PROTEIN-COUPLED RECEPTOR RHODOPSIN IN ITS LIGAND-FREE STATE
Solved by: X-RAY, Resolution: 4.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-334 3capB 15%
[Model]
41-334 3capA 15%
[Model]

2hpy: CRYSTALLOGRAPHIC MODEL OF LUMIRHODOPSIN
Solved by: X-RAY, Resolution: 2.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-359 2hpyB 15%
[Model]
42-359 2hpyA 15%
[Model]

3oax: CRYSTAL STRUCTURE OF BOVINE RHODOPSIN WITH BETA-IONONE
Solved by: X-RAY, Resolution: 2.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-359 3oaxA 15%
[Model]
42-359 3oaxB 15%
[Model]

4bey: NIGHT BLINDNESS CAUSING G90D RHODOPSIN IN COMPLEX WITH GACT2 PEPTIDE
Solved by: X-RAY, Resolution: 3.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-334 4beyA 15%
[Model]

2i35: CRYSTAL STRUCTURE OF RHOMBOHEDRAL CRYSTAL FORM OF GROUND- STATE RHODOPSIN
Solved by: X-RAY, Resolution: 3.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-335 2i35A 15%
[Model]

3c9m: STRUCTURE OF A MUTANT BOVINE RHODOPSIN IN HEXAGONAL CRYSTAFORM
Solved by: X-RAY, Resolution: 3.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-334 3c9mA 15%
[Model]

4bez: NIGHT BLINDNESS CAUSING G90D RHODOPSIN IN THE ACTIVE CONFO
Solved by: X-RAY, Resolution: 3.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-334 4bezA 15%
[Model]

4j4q: CRYSTAL STRUCTURE OF ACTIVE CONFORMATION OF GPCR OPSIN STAOCTYLGLUCOSIDE
Solved by: X-RAY, Resolution: 4.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-334 4j4qA 15%
[Model]

1u19: CRYSTAL STRUCTURE OF BOVINE RHODOPSIN AT 2.2 ANGSTROMS RESOLUTION
Solved by: X-RAY, Resolution: 2.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-359 1u19B 15%
[Model]
42-359 1u19A 15%
[Model]

2r4s: CRYSTAL STRUCTURE OF THE HUMAN BETA2 ADRENOCEPTOR
Solved by: X-RAY, Resolution: 3.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

50-336 2r4sA 15%
[Model]

2x72: CRYSTAL STRUCTURE OF THE CONSTITUTIVELY ACTIVE E113Q,N2C, RHODOPSIN MUTANT WITH BOUND GALPHACT PEPTIDE.
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-334 2x72A 15%
[Model]

1hzx: CRYSTAL STRUCTURE OF BOVINE RHODOPSIN
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

40-335 1hzxA 15%
[Model]
41-334 1hzxB 15%
[Model]

1gzm: STRUCTURE OF BOVINE RHODOPSIN IN A TRIGONAL CRYSTAL FORM
Solved by: X-RAY, Resolution: 3.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-335 1gzmA 15%
[Model]
41-335 1gzmB 15%
[Model]

1jfp: STRUCTURE OF BOVINE RHODOPSIN (DARK ADAPTED)
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

49-358 1jfpA 15%
[Model]

2j4y: CRYSTAL STRUCTURE OF A RHODOPSIN STABILIZING MUTANT EXPRESSED IN MAMMALIAN CELLS
Solved by: X-RAY, Resolution: 3.4A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-334 2j4yA 15%
[Model]
41-334 2j4yB 15%
[Model]

2i36: CRYSTAL STRUCTURE OF TRIGONAL CRYSTAL FORM OF GROUND-STATERHODOPSIN
Solved by: X-RAY, Resolution: 4.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-334 2i36A 15%
[Model]
44-332 2i36B 15%
[Model]
41-331 2i36C 15%
[Model]

3pxo: CRYSTAL STRUCTURE OF METARHODOPSIN II
Solved by: X-RAY, Resolution: 4.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-334 3pxoA 15%
[Model]

2ped: CRYSTALLOGRAPHIC MODEL OF 9-CIS-RHODOPSIN
Solved by: X-RAY, Resolution: 2.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-359 2pedA 15%
[Model]
42-359 2pedB 15%
[Model]

3dqb: CRYSTAL STRUCTURE OF THE ACTIVE G-PROTEIN-COUPLED RECEPTOROPSIN IN COMPLEX WITH A C-TERMINAL PEPTIDE DERIVED FROM THE GALPHA SUBUNIT OF TRANSDUCIN
Solved by: X-RAY, Resolution: 4.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-334 3dqbA 15%
[Model]

1ln6: STRUCTURE OF BOVINE RHODOPSIN (METARHODOPSIN II)
Solved by: NMR, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

49-358 1ln6A 15%
[Model]

1l9h: CRYSTAL STRUCTURE OF BOVINE RHODOPSIN AT 2.6 ANGSTROMS RESOLUTION
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

40-335 1l9hA 15%
[Model]
41-334 1l9hB 15%
[Model]

2i37: CRYSTAL STRUCTURE OF A PHOTOACTIVATED RHODOPSIN
Solved by: X-RAY, Resolution: 4.15A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-334 2i37A 16%
[Model]
43-335 2i37B 15%
[Model]
41-337 2i37C 15%
[Model]

2r4r: CRYSTAL STRUCTURE OF THE HUMAN BETA2 ADRENOCEPTOR
Solved by: X-RAY, Resolution: 3.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

50-336 2r4rA 15%
[Model]

2g87: CRYSTALLOGRAPHIC MODEL OF BATHORHODOPSIN
Solved by: X-RAY, Resolution: 2.95A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

42-359 2g87A 15%
[Model]
42-359 2g87B 15%
[Model]

4ib4: CRYSTAL STRUCTURE OF THE CHIMERIC PROTEIN OF 5-HT2B-BRIL IWITH ERGOTAMINE
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

46-335 4ib4A 14%
[Model]

4iaq: CRYSTAL STRUCTURE OF THE CHIMERIC PROTEIN OF 5-HT1B-BRIL IWITH DIHYDROERGOTAMINE (PSI COMMUNITY TARGET, E. XU)
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

44-333 4iaqA 14%
[Model]

4grv: THE CRYSTAL STRUCTURE OF THE NEUROTENSIN RECEPTOR NTS1 IN NEUROTENSIN (8-13)
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

44-324 4grvA 13%
[Model]

4daj: STRUCTURE OF THE M3 MUSCARINIC ACETYLCHOLINE RECEPTOR
Solved by: X-RAY, Resolution: 3.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

44-328 4dajA 13%
[Model]
44-328 4dajB 13%
[Model]
44-328 4dajC 13%
[Model]
46-331 4dajD 13%
[Model]

4iar: CRYSTAL STRUCTURE OF THE CHIMERIC PROTEIN OF 5-HT1B-BRIL IWITH ERGOTAMINE (PSI COMMUNITY TARGET, E. XU)
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

44-333 4iarA 13%
[Model]

3pbl: STRUCTURE OF THE HUMAN DOPAMINE D3 RECEPTOR IN COMPLEX WITETICLOPRIDE
Solved by: X-RAY, Resolution: 2.89A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

48-332 3pblA 13%
[Model]
48-332 3pblB 13%
[Model]

3vw7: CRYSTAL STRUCTURE OF HUMAN PROTEASE-ACTIVATED RECEPTOR 1 (WITH ANTAGONIST VORAPAXAR AT 2.2 ANGSTROM
Solved by: X-RAY, Resolution: 2.20A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

39-321 3vw7A 13%
[Model]

4eiy: CRYSTAL STRUCTURE OF THE CHIMERIC PROTEIN OF A2AAR-BRIL INWITH ZM241385 AT 1.8A RESOLUTION
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

40-333 4eiyA 12%
[Model]

4k5y: CRYSTAL STRUCTURE OF HUMAN CORTICOTROPIN-RELEASING FACTOR (CRF1R) IN COMPLEX WITH THE ANTAGONIST CP-376395
Solved by: X-RAY, Resolution: 2.98A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

47-147 4k5yA 10%
[Model]
47-148 4k5yB 12%
[Model]
55-201 4k5yC 10%
[Model]

3rze: STRUCTURE OF THE HUMAN HISTAMINE H1 RECEPTOR IN COMPLEX WI
Solved by: X-RAY, Resolution: 3.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

46-331 3rzeA 11%
[Model]

3eml: THE 2.6 A CRYSTAL STRUCTURE OF A HUMAN A2A ADENOSINE RECEPTOR BOUND TO ZM241385.
Solved by: X-RAY, Resolution: 2.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

48-337 3emlA 11%
[Model]

3qak: AGONIST BOUND STRUCTURE OF THE HUMAN ADENOSINE A2A RECEPTO
Solved by: X-RAY, Resolution: 2.71A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

47-334 3qakA 11%
[Model]

4l6r: STRUCTURE OF THE CLASS B HUMAN GLUCAGON G PROTEIN COUPLED
Solved by: X-RAY, Resolution: 3.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

46-335 4l6rA 10%
[Model]

3uon: STRUCTURE OF THE HUMAN M2 MUSCARINIC ACETYLCHOLINE RECEPTOAN ANTAGONIST
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

44-331 3uonA 10%
[Model]

3v2w: CRYSTAL STRUCTURE OF A LIPID G PROTEIN-COUPLED RECEPTOR AT
Solved by: X-RAY, Resolution: 3.35A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

44-329 3v2wA 9%
[Model]

3v2y: CRYSTAL STRUCTURE OF A LIPID G PROTEIN-COUPLED RECEPTOR AT
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

41-332 3v2yA 9%
[Model]

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Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.




SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.