SWISS-MODEL Repository - Model Details

Model Overview
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1
31

Sequence
UniProt P56776
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
PetL

Model 3D Structure
Model information:
Modelled residue range: 1 to 28
Based on template: [ 1q90 ]  
Sequence Identity [%]: 53%
Model date: 2008-08-31
Revision date: 2008-08-31

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-08-31. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    1       MLTITSYF GFLLAALTIT SVLFIGLSKI  ---                 
1q90L     1       mltitsyv glligalvft lgiylgllkv vkli                 
                                                                      
TARGET             hhhhhhh hhhhhhhhhh hhhhhhhhh                       
1q90L              hhhhhhh hhhhhhhhhh hhhhhhhhhh

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: 7d64c488ad3dd5591f61b7d42ce10160 on BC2-cluster at Sun Aug 31 04:10:17 2008 
NO HITS FOUND IN BLAST-SEARCH FOR SEQID-CUTOFF 60 GO TO HHSEARCH


############# TEMPLATES SELECTED #############

>7d64c488ad3dd5591f61b7d42ce10160
*******************************
>1q90L Evalue:1.8E-05 SeqID:53.571 Method:HHSEARCH Type:MODEL
****************************---


TEMPLATE ID    START          STOP           METHOD         STATUS         
1q90L          1              28             HHSEARCH       BUILT          

FINISHED PIPELINE ON ID: 7d64c488ad3dd5591f61b7d42ce10160 on gopt-75.cluster.bc2.ch BC2-Cluster at
Sun Aug 31 04:10:45 2008


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.