SWISS-MODEL Repository

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SWISS-MODEL Repository - Model Details

Model Overview

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131

Sequence

UniProt

P64515

Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

STRING

P64515: 511145.b1869

Domain

Link to: [ InterPro ]

MAPEG

Model 3D Structure

	Model information:
	Modelled residue range:	3 to 121
	Based on template:	[ 3hkk ]
	Sequence Identity [%]:	25%
	Model date:	2013-04-23
	Revision date:	2013-04-01

Quaternary structure information:	[details]
Template (3hkk): TRIMER Model: TRIMER

Ligand information:	[details]
Ligands in the template: GTS: 3, PAM: 3, PLM: 18. Ligands in the model: none.

Template Links: [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

Alignment


TARGET    1              S ALYAVLSALL LMKFSFDVVR LRMQYRVAYG D-GGFSELQS
3hkk_1#3  1     hkdeval--l aavtllgvll qayfslqvis arrafrvspp lttgppefer
                                                                      
TARGET                     hhhhhhhhhh hhhhhhhhhh hhhhh           hhhhh
3hkk_1#3             hh  h hhhhhhhhhh hhhhhhhhhh hhhhh           hhhhh


TARGET    41    AIRIHGNAVE YIPIAIVLML FMEMNGAETW MVHICGIVLL AGRLMHYYGF
3hkk_1#3  49    vyraqvncse yfplflatlw vagiff-heg aaalcglvyl farlryfqgy
                                                                      
TARGET          hhhhhhhhhh hhhhhhhhhh hhhh       hhhhhhhhhh hhhhhhhhhh
3hkk_1#3        hhhhhhhhhh hhhhhhhhhh hhhhh    h hhhhhhhhhh hhhhhhhhhh


TARGET    91    HHRLFRWRRS GMSATWCALL LMVLANLWY  ---------- ----------
3hkk_1#3  98    a-rsaqlrla plyasaralw llvalaalg- llahflpaal raallgrlrt
                                                                      
TARGET          h     hhhh hhhhhhhhhh hhhhhhhhh                       
3hkk_1#3        h    hhhhh hhhhhhhhhh hhhhhhhhh  hhhhhhhhhh hhhhhh    


TARGET    120   -------- S ALYAVLSALL LMKFSFDVVR LRMQYRVAYG D-GGFSELQS
3hkk_1#3  1     hkdeval--l aavtllgvll qayfslqvis arrafrvspp lttgppefer
                       *                                              
TARGET                     hhhhhhhhhh hhhhhhhhhh hhhhh           hhhhh
3hkk_1#3             hh  h hhhhhhhhhh hhhhhhhhhh hhhhh           hhhhh


TARGET    160   AIRIHGNAVE YIPIAIVLML FMEMNGAETW MVHICGIVLL AGRLMHYYGF
3hkk_1#3  49    vyraqvncse yfplflatlw vagiff-heg aaalcglvyl farlryfqgy
                                                                      
TARGET          hhhhhhhhhh hhhhhhhhhh hhhh     h hhhhhhhhhh hhhhhhhhhh
3hkk_1#3        hhhhhhhhhh hhhhhhhhhh hhhhh    h hhhhhhhhhh hhhhhhhhhh


TARGET    210   HHRLFRWRRS GMSATWCALL LMVLANLWY  ---------- ----------
3hkk_1#3  98    a-rsaqlrla plyasaralw llvalaalg- llahflpaal raallgrlrt
                                                                      
TARGET          h     hhhh hhhhhhhhhh hhhhhhhhh                       
3hkk_1#3        h    hhhhh hhhhhhhhhh hhhhhhhhh  hhhhhhhhhh hhhhhh    


TARGET    239   -------- S ALYAVLSALL LMKFSFDVVR LRMQYRVAYG D-GGFSELQS
3hkk_1#3  1     hkdeval--l aavtllgvll qayfslqvis arrafrvspp lttgppefer
                       *                                              
TARGET                     hhhhhhhhhh hhhhhhhhhh hhhhh           hhhhh
3hkk_1#3             hh  h hhhhhhhhhh hhhhhhhhhh hhhhh           hhhhh


TARGET    279   AIRIHGNAVE YIPIAIVLML FMEMNGAETW MVHICGIVLL AGRLMHYYGF
3hkk_1#3  49    vyraqvncse yfplflatlw vagiff-heg aaalcglvyl farlryfqgy
                                                                      
TARGET          hhhhhhhhhh hhhhhhhhhh hhhh     h hhhhhhhhhh hhhhhhhhhh
3hkk_1#3        hhhhhhhhhh hhhhhhhhhh hhhhh    h hhhhhhhhhh hhhhhhhhhh


TARGET    329   HHRLFRWRRS GMSATWCALL LMVLANLWY  ---------- --------- 
3hkk_1#3  98    a-rsaqlrla plyasaralw llvalaalgl lahflpaalr aallgrlrt 
                                                                      
TARGET          h     hhhh hhhhhhhhhh hhhhhhhhh                       
3hkk_1#3        h    hhhhh hhhhhhhhhh hhhhhhhhhh hhhhhhhhhh hhhhh

Quality

[ start new quality assessment in Workspace ]

Ligand Modelling Log

Template's ligands section 
Ligands in the template: GTS: 3, PAM: 3, PLM: 18. 
The template contains ligands that are not yet part of the pipeline. Ligands which are currently assessed are listed in the help page. 
No ligands were included in the model.

Oligomer Modelling Log

Quaternary Structure Annotation of the Template 
 3hkk is annotated as TRIMER 
 The oligomeric state of the structure was assigned by the authors of the corresponding PDB entry 
 The following biological unit was used to build the template structure: 3hkk.pdb1.gz 
      
 
Quaternary Structure Modelling of the Target Protein 
 Analysis of evolutionary and family specific aspects revealed conservation of the oligomeric structure 
 Hence, the oligomeric structures of the target and the template can be assumed to be similar (=TRIMER) 
 The corresponding reliability score is 0.582 (>0.5 indicates similarity) 
 Model was succesfully built as TRIMER.

Template Selection

 - Start SMR-Pipeline for:10bf2b136d7e76cf4539f28f5a1cddd6 on BC2-cluster at Tue Apr 23 05:15:49
2013 


 - Analyze BLAST summary ... 
 - No templates found with BLAST (seqid-cutoff: 60): go to HHSEARCH

 - No A3m found

 - Run HHSearch to detect more templates...
 - Generate new template library
 - Run template selection against modfied template library 
 - Summarize templates: 
 - Send 1 Templates for modeling

 - @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@
 -   *************************************************************************
 - building model based on 3hkkA (3-121) was successful 
 - Repository Pipeline parameter

   Cut-off parameters to model the target based on a BLAST target-template alignment
    Evalue :                                     0.0001
    Minimum Template size (aa) for ranking :     25
    Minimum Sequence identity :                  60

   Cut-off parameters to model the target based on a HHSearch target-template alignment
    Evalue :                                     0.0001
    Probability :                                50
    MAC :                                        0.3

   Parameters for model selection
    Minimal number of uncovered target
     residues after BLAST to run HHSEARCH :      50
    Minimal number of uncovered target
     residues to model an additional template :  25
    
 - Finish SMR-Pipeline for:10bf2b136d7e76cf4539f28f5a1cddd6 on BC2-cluster at Tue Apr 23 05:28:23
2013

Template Search

[ start new template identification in Workspace ]

Template Description

Match

Chain

SeqId

2uuh: CRYSTAL STRUCTURE OF HUMAN LEUKOTRIENE C4 SYNTHASE IN COMPLEX WITH SUBSTRATE GLUTATHIONE
Solved by: X-RAY, Resolution: 2.15A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

2-120

2uuhA

26%

3hkk: STRUCTURE OF HUMAN LEUKOTRIENE C4 SYNTHASE IN COMPLEX WITHSULFONATE
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

3-121

3hkkA

26%

2pno: CRYSTAL STRUCTURE OF HUMAN LEUKOTRIENE C4 SYNTHASE
Solved by: X-RAY, Resolution: 3.30A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

2-120	2pnoA	26%	>target -----VSALYAVLSALLLMKFSFDVVRLRMQYRVAYGD-GGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLW----------------------- >2pnoA KDEVALLAAVTLLGVLLQAYFSLQVISARRAFRVSPPLTTGPPEFERVYRAQVNCSEYFPLFLATLWVAGIFF-HEGAAALCGLVYLFARLRYFQGYA-RSAQLRLAPLYASARALWLLVALAALGLLAHFLPAALRAALLGRLRTLL [Model]
2-120	2pnoC	26%	>target -----VSALYAVLSALLLMKFSFDVVRLRMQYRVAYGD-GGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLW----------------------- >2pnoC KDEVALLAAVTLLGVLLQAYFSLQVISARRAFRVSPPLTTGPPEFERVYRAQVNCSEYFPLFLATLWVAGIFF-HEGAAALCGLVYLFARLRYFQGYA-RSAQLRLAPLYASARALWLLVALAALGLLAHFLPAALRAALLGRLRTLL [Model]
2-120	2pnoB	26%	>target -----VSALYAVLSALLLMKFSFDVVRLRMQYRVAYGD-GGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLW----------------------- >2pnoB KDEVALLAAVTLLGVLLQAYFSLQVISARRAFRVSPPLTTGPPEFERVYRAQVNCSEYFPLFLATLWVAGIFF-HEGAAALCGLVYLFARLRYFQGYA-RSAQLRLAPLYASARALWLLVALAALGLLAHFLPAALRAALLGRLRTLL [Model]
2-120	2pnoE	26%	>target -----VSALYAVLSALLLMKFSFDVVRLRMQYRVAYGD-GGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLW----------------------- >2pnoE KDEVALLAAVTLLGVLLQAYFSLQVISARRAFRVSPPLTTGPPEFERVYRAQVNCSEYFPLFLATLWVAGIFF-HEGAAALCGLVYLFARLRYFQGYA-RSAQLRLAPLYASARALWLLVALAALGLLAHFLPAALRAALLGRLRTLL [Model]
2-120	2pnoD	26%	>target -----VSALYAVLSALLLMKFSFDVVRLRMQYRVAYGD-GGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLW----------------------- >2pnoD KDEVALLAAVTLLGVLLQAYFSLQVISARRAFRVSPPLTTGPPEFERVYRAQVNCSEYFPLFLATLWVAGIFF-HEGAAALCGLVYLFARLRYFQGYA-RSAQLRLAPLYASARALWLLVALAALGLLAHFLPAALRAALLGRLRTLL [Model]
2-120	2pnoF	26%	>target -----VSALYAVLSALLLMKFSFDVVRLRMQYRVAYGD-GGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLW----------------------- >2pnoF KDEVALLAAVTLLGVLLQAYFSLQVISARRAFRVSPPLTTGPPEFERVYRAQVNCSEYFPLFLATLWVAGIFF-HEGAAALCGLVYLFARLRYFQGYA-RSAQLRLAPLYASARALWLLVALAALGLLAHFLPAALRAALLGRLRTLL [Model]
2-120	2pnoH	26%	>target -----VSALYAVLSALLLMKFSFDVVRLRMQYRVAYGD-GGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLW----------------------- >2pnoH KDEVALLAAVTLLGVLLQAYFSLQVISARRAFRVSPPLTTGPPEFERVYRAQVNCSEYFPLFLATLWVAGIFF-HEGAAALCGLVYLFARLRYFQGYA-RSAQLRLAPLYASARALWLLVALAALGLLAHFLPAALRAALLGRLRTLL [Model]
2-120	2pnoG	26%	>target -----VSALYAVLSALLLMKFSFDVVRLRMQYRVAYGD-GGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLW----------------------- >2pnoG KDEVALLAAVTLLGVLLQAYFSLQVISARRAFRVSPPLTTGPPEFERVYRAQVNCSEYFPLFLATLWVAGIFF-HEGAAALCGLVYLFARLRYFQGYA-RSAQLRLAPLYASARALWLLVALAALGLLAHFLPAALRAALLGRLRTLL [Model]
2-120	2pnoI	26%	>target -----VSALYAVLSALLLMKFSFDVVRLRMQYRVAYGD-GGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLW----------------------- >2pnoI KDEVALLAAVTLLGVLLQAYFSLQVISARRAFRVSPPLTTGPPEFERVYRAQVNCSEYFPLFLATLWVAGIFF-HEGAAALCGLVYLFARLRYFQGYA-RSAQLRLAPLYASARALWLLVALAALGLLAHFLPAALRAALLGRLRTLL [Model]
2-120	2pnoL	26%	>target -----VSALYAVLSALLLMKFSFDVVRLRMQYRVAYGD-GGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLW----------------------- >2pnoL KDEVALLAAVTLLGVLLQAYFSLQVISARRAFRVSPPLTTGPPEFERVYRAQVNCSEYFPLFLATLWVAGIFF-HEGAAALCGLVYLFARLRYFQGYA-RSAQLRLAPLYASARALWLLVALAALGLLAHFLPAALRAALLGRLRTLL [Model]
2-120	2pnoK	26%	>target -----VSALYAVLSALLLMKFSFDVVRLRMQYRVAYGD-GGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLW----------------------- >2pnoK KDEVALLAAVTLLGVLLQAYFSLQVISARRAFRVSPPLTTGPPEFERVYRAQVNCSEYFPLFLATLWVAGIFF-HEGAAALCGLVYLFARLRYFQGYA-RSAQLRLAPLYASARALWLLVALAALGLLAHFLPAALRAALLGRLRTLL [Model]
2-120	2pnoJ	26%	>target -----VSALYAVLSALLLMKFSFDVVRLRMQYRVAYGD-GGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLW----------------------- >2pnoJ KDEVALLAAVTLLGVLLQAYFSLQVISARRAFRVSPPLTTGPPEFERVYRAQVNCSEYFPLFLATLWVAGIFF-HEGAAALCGLVYLFARLRYFQGYA-RSAQLRLAPLYASARALWLLVALAALGLLAHFLPAALRAALLGRLRTLL [Model]

3leo: STRUCTURE OF HUMAN LEUKOTRIENE C4 SYNTHASE MUTANT R31Q IN GLUTATHIONE
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

2-123

3leoA

25%

2uui: CRYSTAL STRUCTURE OF HUMAN LEUKOTRIENE C4 SYNTHASE
Solved by: X-RAY, Resolution: 2.0A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

2-126

2uuiA

25%

3pcv: CRYSTAL STRUCTURE ANALYSIS OF HUMAN LEUKOTRIENE C4 SYNTHASANGSTROM RESOLUTION
Solved by: X-RAY, Resolution: 1.90A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

3-125

3pcvA

25%

3b29: HUMAN LEUKOTRIENE C4 SYNTHASE IN COMPLEX WITH DODECYL-BETASELENOMALTOSIDE
Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

2-127

3b29A

24%

2h8a: STRUCTURE OF MICROSOMAL GLUTATHIONE TRANSFERASE 1 IN COMPLEX WITH GLUTATHIONE
Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

4-117

2h8aA

17%

3dww: ELECTRON CRYSTALLOGRAPHIC STRUCTURE OF HUMAN MICROSOMAL PROSTAGLANDIN E SYNTHASE 1
Solved by: X-RAY, Resolution: 3.50A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

4-124	3dwwB	16%	>target ------ALYAVLSALLLMKFSFDVVRLRMQYRVA--YG----------DGGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRL-FRWRRSGMSATWCALLLMVLANLWYMPW-- >3dwwB PALPAFLLCSTLLVIKMYVVAIITGQVRLRKKAFANPEDALRHGGPQYCRSDPDVERCLRAHRNDMETIYPFLFLGFVYSFLGPNPFVAWMHFLVFLVGRVAHTVAYLGKLRAPIRSVTYTLAQLPCASMALQILWEAARHL [Model]
4-124	3dwwA	16%	>target ------ALYAVLSALLLMKFSFDVVRLRMQYRVA--YG----------DGGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRL-FRWRRSGMSATWCALLLMVLANLWYMPW-- >3dwwA PALPAFLLCSTLLVIKMYVVAIITGQVRLRKKAFANPEDALRHGGPQYCRSDPDVERCLRAHRNDMETIYPFLFLGFVYSFLGPNPFVAWMHFLVFLVGRVAHTVAYLGKLRAPIRSVTYTLAQLPCASMALQILWEAARHL [Model]
4-124	3dwwC	16%	>target ------ALYAVLSALLLMKFSFDVVRLRMQYRVA--YG----------DGGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRL-FRWRRSGMSATWCALLLMVLANLWYMPW-- >3dwwC PALPAFLLCSTLLVIKMYVVAIITGQVRLRKKAFANPEDALRHGGPQYCRSDPDVERCLRAHRNDMETIYPFLFLGFVYSFLGPNPFVAWMHFLVFLVGRVAHTVAYLGKLRAPIRSVTYTLAQLPCASMALQILWEAARHL [Model]

4al0: CRYSTAL STRUCTURE OF HUMAN PS-1
Solved by: X-RAY, Resolution: 1.16A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

3-123

4al0A

15%

4al1: CRYSTAL STRUCTURE OF HUMAN PS-1 GSH-ANALOG COMPLEX
Solved by: X-RAY, Resolution: 1.95A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

3-123

4al1A

15%

2q7m: CRYSTAL STRUCTURE OF HUMAN FLAP WITH MK-591
Solved by: X-RAY, Resolution: 4.25A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

4-127	2q7mA	12%	>target ------------ALYAVLSALLLMKFSFDVVRLRMQYRVAY-GDGGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLWYMPWELV---- >2q7mA MDQETVGNVVLLAIVTLISVVQNGFFAHKVEHESRTQNGRSFQRTGTLAFERVYTANQNCVDAYPTFLAVLWSAGLLC-SQVPAAFAGLMYLFVRQKYFVGYL-GERTQSTPGYIFGKRIILFLFLMSVAGIFNYYLIFFF [Model]
3-127	2q7mB	12%	>target -----------SALYAVLSALLLMKFSFDVVRLRMQYRVAYG-DGGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLWYMPWELV------------- >2q7mB MDQETVGNVVLLAIVTLISVVQNGFFAHKVEHESRTQNGRSFQRTGTLAFERVYTANQNCVDAYPTFLAVLWSAGLL-CSQVPAAFAGLMYLFVRQKYFVGYL-GERTQSTPGYIFGKRIILFLFLMSVAGIFNYYLIFFFGSDFENYIA [Model]
4-126	2q7mC	12%	>target ------------ALYAVLSALLLMKFSFDVVRLRMQYRVAY-GDGGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLWYMPWEL--------------- >2q7mC MDQETVGNVVLLAIVTLISVVQNGFFAHKVEHESRTQNGRSFQRTGTLAFERVYTANQNCVDAYPTFLAVLWSAGLL-CSQVPAAFAGLMYLFVRQKYFVGYL-GERTQSTPGYIFGKRIILFLFLMSVAGIFNYYLIFFFGSDFENYIAT [Model]
3-127	2q7mE	12%	>target -----------SALYAVLSALLLMKFSFDVVRLRMQYRVAYG-DGGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLWYMPWELV----- >2q7mE MDQETVGNVVLLAIVTLISVVQNGFFAHKVEHESRTQNGRSFQRTGTLAFERVYTANQNCVDAYPTFLAVLWSAGLLC-SQVPAAFAGLMYLFVRQKYFVGYL-GERTQSTPGYIFGKRIILFLFLMSVAGIFNYYLIFFFG [Model]
4-126	2q7mD	12%	>target ------------ALYAVLSALLLMKFSFDVVRLRMQYRVAYG-DGGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLWYMPWEL------------- >2q7mD MDQETVGNVVLLAIVTLISVVQNGFFAHKVEHESRTQNGRSFQRTGTLAFERVYTANQNCVDAYPTFLAVLWSAGLLC-SQVPAAFAGLMYLFVRQKYFVGYL-GERTQSTPGYIFGKRIILFLFLMSVAGIFNYYLIFFFGSDFENYI [Model]
4-126	2q7mF	12%	>target ------------ALYAVLSALLLMKFSFDVVRLRMQYRVAY-GDGGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLWYMPWEL--------------- >2q7mF MDQETVGNVVLLAIVTLISVVQNGFFAHKVEHESRTQNGRSFQRTGTLAFERVYTANQNCVDAYPTFLAVLWSAGLL-CSQVPAAFAGLMYLFVRQKYFVGYL-GERTQSTPGYIFGKRIILFLFLMSVAGIFNYYLIFFFGSDFENYIAT [Model]

2q7r: CRYSTAL STRUCTURE OF HUMAN FLAP WITH AN IODINATED ANALOG OMK-591
Solved by: X-RAY, Resolution: 4.25A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

3-127	2q7rA	12%	>target -----------SALYAVLSALLLMKFSFDVVRLRMQYRVAYG-DGGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLWYMPWELV----- >2q7rA MDQETVGNVVLLAIVTLISVVQNGFFAHKVEHESRTQNGRSFQRTGTLAFERVYTANQNCVDAYPTFLAVLWSAGLLC-SQVPAAFAGLMYLFVRQKYFVGYL-GERTQSTPGYIFGKRIILFLFLMSVAGIFNYYLIFFFG [Model]
3-127	2q7rB	12%	>target -----------SALYAVLSALLLMKFSFDVVRLRMQYRVAYG-DGGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLWYMPWELV------------- >2q7rB MDQETVGNVVLLAIVTLISVVQNGFFAHKVEHESRTQNGRSFQRTGTLAFERVYTANQNCVDAYPTFLAVLWSAGLL-CSQVPAAFAGLMYLFVRQKYFVGYL-GERTQSTPGYIFGKRIILFLFLMSVAGIFNYYLIFFFGSDFENYIA [Model]
4-126	2q7rC	12%	>target ------------ALYAVLSALLLMKFSFDVVRLRMQYRVAY-GDGGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLWYMPWEL--------------- >2q7rC MDQETVGNVVLLAIVTLISVVQNGFFAHKVEHESRTQNGRSFQRTGTLAFERVYTANQNCVDAYPTFLAVLWSAGLL-CSQVPAAFAGLMYLFVRQKYFVGYL-GERTQSTPGYIFGKRIILFLFLMSVAGIFNYYLIFFFGSDFENYIAT [Model]
3-127	2q7rE	12%	>target -----------SALYAVLSALLLMKFSFDVVRLRMQYRVAYG-DGGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLWYMPWELV----- >2q7rE MDQETVGNVVLLAIVTLISVVQNGFFAHKVEHESRTQNGRSFQRTGTLAFERVYTANQNCVDAYPTFLAVLWSAGLLC-SQVPAAFAGLMYLFVRQKYFVGYL-GERTQSTPGYIFGKRIILFLFLMSVAGIFNYYLIFFFG [Model]
3-127	2q7rD	12%	>target -----------SALYAVLSALLLMKFSFDVVRLRMQYRVAYG-DGGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLWYMPWELV------------- >2q7rD MDQETVGNVVLLAIVTLISVVQNGFFAHKVEHESRTQNGRSFQRTGTLAFERVYTANQNCVDAYPTFLAVLWSAGLL-CSQVPAAFAGLMYLFVRQKYFVGYL-GERTQSTPGYIFGKRIILFLFLMSVAGIFNYYLIFFFGSDFENYIA [Model]
4-126	2q7rF	12%	>target ------------ALYAVLSALLLMKFSFDVVRLRMQYRVAY-GDGGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMNGAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLWYMPWEL--------------- >2q7rF MDQETVGNVVLLAIVTLISVVQNGFFAHKVEHESRTQNGRSFQRTGTLAFERVYTANQNCVDAYPTFLAVLWSAGLL-CSQVPAAFAGLMYLFVRQKYFVGYL-GERTQSTPGYIFGKRIILFLFLMSVAGIFNYYLIFFFGSDFENYIAT [Model]

Downloads

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Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.