SWISS-MODEL Repository - Model Details

Model Overview
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1
77

Sequence
UniProt P70742
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
DsrD

Model 3D Structure
Model information:
Modelled residue range: 6 to 64
Based on template: [ 1ucr ]  
Sequence Identity [%]: 40%
Model date: 2008-08-30
Revision date: 2008-08-30

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-08-30. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    6        EEDKQKV LAQL-----S KKTWKIPELA KIL-KMDKKV VKKIVQDLIN
1ucrA     1     m--eeakqkv vdflnsksgs kskfyfndft dlfpdmkqre vkkiltalvn
                                                                      
TARGET              hhhhhh hh            ssshhhh         hh hhhhhhhhhh
1ucrA               hhhhhh hhhh          ssshhhh h      hhh hhhhhhhhhh


TARGET    47    EGVAGYWSSG STTYVATK - ------                          
1ucrA     49    devleywssg sttmyglkga gkqaaa                          
                                                                      
TARGET          h sssssss   sssssss                                   
1ucrA           h sssssss   sssssss h hhhhh

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: ecf5b91c3658452c355b8a037e91c2ce on BC2-cluster at Sat Aug 30 06:01:37 2008 
NO HITS FOUND IN BLAST-SEARCH FOR SEQID-CUTOFF 60 GO TO HHSEARCH


############# TEMPLATES SELECTED #############

>ecf5b91c3658452c355b8a037e91c2ce
*****************************************************************************
>1ucrA Evalue:1E-08 SeqID:40.000 Method:HHSEARCH Type:MODEL
-----***********************************************************-------------


TEMPLATE ID    START          STOP           METHOD         STATUS         
1ucrA          6              64             HHSEARCH       BUILT          

FINISHED PIPELINE ON ID: ecf5b91c3658452c355b8a037e91c2ce on gopt-57.cluster.bc2.ch BC2-Cluster at
Sat Aug 30 06:02:24 2008


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
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