SWISS-MODEL Repository - Model Details

Model Overview
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1
409

Sequence
UniProt P72946
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
Histidinol_dh

Model 3D Structure
Model information:
Modelled residue range: 8 to 403
Based on template: [ 1k75 ]  
Sequence Identity [%]: 24%
Model date: 2008-08-30
Revision date: 2008-08-30

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-08-30. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    8             SG DIVQELRRLH HRPVPSPWPV MAQVVAAM-- ----------
1k75A     4     ntiidw--ns ctaeqqrqll xrpaisases itrtvndild nvkargdeal
                                                                      
TARGET                       hhhhhhh          hh hhhhhh               
1k75A              sss       hhhhhhh          hh hhhhhhhhhh hhh   hhhh


TARGET    38    -EHWAAMDQD AP--PRVSGA ELDAAYQRIS QEKLSVIRQA CAALEQVYRP
1k75A     52    reysakfdkt tvtalkvsae eiaaaserls delkqaxava vknietfhta
                                                                      
TARGET                         sss hh hhhhhhh    hhhhhhhhhh hhhhhhhhhh
1k75A           hhhhh          sss hh hhhhhhh    hhhhhhhhhh hhhhhhhhhh


TARGET    85    QLPKTQVSFP EDGTVRGQRF YPVRRAGFYL EAKRGDALGN LLRQGMLAKT
1k75A     102   qklppvdvet qpgvrcqqvt rpvasvglyi pggsaplfst vlxlatpasi
                                                                      
TARGET               sssss   ssssssss ssssssssss         hh hhhhhhhhhh
1k75A                sssss   ssssssss ssssssssss         hh hhhhhhhhhh


TARGET    135   VGVAERVLVT ETI-SSTILV AAQEMGIEEI YLAAGVPAIA MLTWGAKNIA
1k75A     152   agckkvvlcs pppiadeily aaqlcgvqdv fnvggaqaia alafgtesvp
                                                                      
TARGET          h   ssssss       hhhh hhhhh   ss sss   hhhh hhhh      
1k75A           h   ssssss      hhhhh hhhh    ss sss  hhhhh hhhh      


TARGET    184   PVESITGAGC PRVMAAKQLV SGV---VTID QTLARTNLMV LADGEANGQW
1k75A     202   kvdkifgpgn afvteakrqv sqrldgaaid xpagpsevlv iadsgatpdf
                                                                      
TARGET            ssss     hhhhhhhhhh        sss      sssss sss    hhh
1k75A             ssss     hhhhhhhhhh hh     sss      sssss sss    hhh


TARGET    231   LALDLLAHAE QYPNASAVLL TDRLELGEEV IQSVNRYCRE QEHSVHTEKA
1k75A     252   vasdllsqae hgpdsqvill tpaadxarrv aeaverqlae lpraetarqa
                                                                      
TARGET          hhhhhhhhhh      sssss s  hhhhhhh hhhhhhhhh      hhhhhh
1k75A           hhhhhhhhhh      sssss s  hhhhhhh hhhhhhhhh      hhhhhh


TARGET    281   LAHYGLVAIV EDLEACGSWI NEFCPHILLL AMEDPWTMVE KVQRAREIYI
1k75A     302   lnasrl-ivt kdlaqcveis nqygpehlii qtrnarelvd sitsagsvfl
                                                                      
TARGET          hh     sss   hhhhhhhh hhh  sssss s    hhhhh       ssss
1k75A           hh  ss sss   hhhhhhhh hhh  sssss s    hhhhh       ssss


TARGET    331   GHRSPSILGH YLSGANRLQT QDGAMATASE LAFHCFLRSS QLLDYGNNPP
1k75A     351   gdwspesagd yasgtnhvlp tygytatcss lgladfqkrx tvqelskegf
                                                                      
TARGET          s     hhhh                            sssss ssssss    
1k75A           s     hhhh                          hhsssss sssssshhhh


TARGET    381   ---PPWLKDL VNWQGLT--- -AIEERLGQL  ---                 
1k75A     401   salastietl aaaerltahk navtlrvnal keqa                 
                                                                      
TARGET               hhhhh hhh           hhhhhhh                      
1k75A           hhhhhhhhhh hh   hhhhh hhhhhhhhhh hhh

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: 3fb133bcd3aad2a0438674e5532d4789 on BC2-cluster at Sat Aug 30 13:56:24 2008 
NO HITS FOUND IN BLAST-SEARCH FOR SEQID-CUTOFF 60 GO TO HHSEARCH


############# TEMPLATES SELECTED #############

>3fb133bcd3aad2a0438674e5532d4789
**********************************************************************************
>1k75A Evalue:0 SeqID:24.882 Method:HHSEARCH Type:MODEL
-********************************************************************************-


TEMPLATE ID    START          STOP           METHOD         STATUS         
1k75A          8              403            HHSEARCH       BUILT          

FINISHED PIPELINE ON ID: 3fb133bcd3aad2a0438674e5532d4789 on gopt-62.cluster.bc2.ch BC2-Cluster at
Sat Aug 30 13:59:58 2008


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.