SWISS-MODEL Repository - Model Details

Model Overview
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1
375

Sequence
UniProt P73071
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
AA_kinase
PUA

Model 3D Structure
Model information:
Modelled residue range: 7 to 373
Based on template: [ 2j5t ]  
Sequence Identity [%]: 40%
Model date: 2008-08-31
Revision date: 2008-08-31

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-08-31. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    7      PQTLVIKIG TSSLARPETG QLALSTIAAL VETVCKLIGQ GHRVVLVSSG
2j5tA     3     dsqtlvvklg tsvltg-gsr rlnrahivel vrqcaqlhaa ghrivivtsg
                                                                      
TARGET            sssssss  hhhh          hhhhhhh hhhhhhhhhh   sssssss 
2j5tA             sssssss  hhhhh         hhhhhhh hhhhhhhhhh   sssssss 


TARGET    56    AIGVGCSRLG LTERPKKMAL KQAIAAVGQG RLMRTYDDLF SSLRQPIAQI
2j5tA     52    aiaagrehlg ypelpatias kqllaavgqs rliqlweqlf siygihvgqm
                                                                      
TARGET          hhhhhhhhh          hh hhhhhhhhhh hhhhhhhhhh h    sssss
2j5tA           hhhhhhhhh          hh hhhhhhhhhh hhhhhhhhhh h    sssss


TARGET    106   LLTRRELIER TAYVNAYNTF QALFELGVIA IVNENDTVAI DELKFGDNDT
2j5tA     102   lltradmedr erflnardtl ralldnnvvp vinendavat aeikvgdndn
                                                                      
TARGET          ss       h hhhhhhhhhh hhhhh   ss sss               hhh
2j5tA           ss       h hhhhhhhhhh hhhhh   ss sssss             hhh


TARGET    156   LSALVASLVE ADWLFLLTDV DRLYSSDPRL DPDAYPIPLV KAAELAQLQV
2j5tA     152   lsalaailag adklllltdq kglytadprs npqaelikdv ygid------
                                                                      
TARGET          hhhhhhhhh    ssssss     sss          ssssss   ssssss  
2j5tA           hhhhhhhhh    ssssss     sss          ssssss           


TARGET    206   RTDSTGSAWG TGGMATKITA ARIATGSGVR TVITHGQKPE QILAILQGAN
2j5tA     196   ------dalr aggmstklqa advacragid tiiaagskpg vigdvmegis
                                                                      
TARGET          sssssss        hhhhhh hhhhhhh  s ssssss     hhhhhhh   
2j5tA                          hhhhhh hhhhhhh  s ssssss     hhhhhhh   


TARGET    256   LGTQFEAQPR SDNARKRWIA YGLVPTGKIF IDAGAVQALK ARGKSLLAIG
2j5tA     251   vgtlfhaqat plenrkrwif -gappageit vdegataail ergssllpkg
                                                                      
TARGET            ssss                      ssss sshhhhhhhh h        s
2j5tA             ssss            hhh       ssss sshhhhhhhh h        s


TARGET    306   VVALEGEFSA TDAVIICDPQ GQELGRGLVN YNCNELEKIK GLHSEAIAAV
2j5tA     300   iksvtgnfsr geviricnle grdiahgvsr ynsdalrria ghhsqeidai
                                                                      
TARGET          sssss       sssssss    ssssssss    hhhhhhh      hhhhhh
2j5tA           sssss       sssssss    ssssssss    hhhhhhh      hhhhhh


TARGET    356   LGYVGPDTVI HRDNLVLQ                                   
2j5tA     350   lgyeygpvav hrddmitr-                                  
                                                                      
TARGET          h             sssss                                   
2j5tA           h             sssss

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: 661ec75513c9d47e5a88c7168ea567ea on BC2-cluster at Sun Aug 31 08:35:42 2008 
NO HITS FOUND IN BLAST-SEARCH FOR SEQID-CUTOFF 60 GO TO HHSEARCH


############# TEMPLATES SELECTED #############

>661ec75513c9d47e5a88c7168ea567ea
***************************************************************************
>2j5tA Evalue:0 SeqID:40.872 Method:HHSEARCH Type:MODEL
-***************************************--*********************************


TEMPLATE ID    START          STOP           METHOD         STATUS         
2j5tA          7              373            HHSEARCH       BUILT          

FINISHED PIPELINE ON ID: 661ec75513c9d47e5a88c7168ea567ea on gopt-72.cluster.bc2.ch BC2-Cluster at
Sun Aug 31 08:39:02 2008


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.