SWISS-MODEL Repository - Model Details

Model Overview
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1
305

Sequence
UniProt P73460
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
Methyltransf_5

Model 3D Structure
Model information:
Modelled residue range: 20 to 305
Based on template: [ 1wg8 ]  
Sequence Identity [%]: 45%
Model date: 2008-08-31
Revision date: 2008-08-31

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-08-31. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    20       HHVSVLP TALVEGLEPK PGGYYLDATV GAGGHSERLL KLGIPLALTM
1wg8A     4     m--thvpvly qealdllavr pggvyvdatl ggaghargil ergg--rvig
                                                                      
TARGET                   h hhhhhhh      ssssss      hhhhhhh h     ssss
1wg8A                    h hhhhhhh      ssssss      hhhhhhh hh    ssss


TARGET    67    IDRDVQAIAA AMERLQPLVA DRKDISINTW QGNFADFPGQ L-----EQFD
1wg8A     50    ldqdpeavar akglhlp--- -----gltvv qgnfrhlkrh laalgvervd
                                                                      
TARGET          ss  hhhhhh hh              sssss ss    hhhh           
1wg8A           ss  hhhhhh hhh             sssss ss    hhhh hhhh      


TARGET    112   GIIADLGVSS PQLDQGDRGF SFRHTAPLDM RMDQSQDLTA AEIINHWSEK
1wg8A     92    giladlgvss fhlddpsrgf syqkegpldm rmgleg-pta kevvnrlple
                                                                      
TARGET          ssssss   h hhhh            sss            h hhhhh   hh
1wg8A           ssssss   h hhhh            sss            h hhhhh   hh


TARGET    162   DLARIFYEYG EERLSRRIAR QIVEQ---RP FQTTTDLAEA ITKWVPGKYR
1wg8A     141   alarllrelg eepqayriar aivaarekap ietttqlaei vrkavgf---
                                                                      
TARGET          hhhhhhhhh      hhhhhh hhhh        ssshhhhhh hhhhh     
1wg8A           hhhhhhhhh      hhhhhh hhhhhhhh    ssshhhhhh hhhhh     


TARGET    209   HGRIHPATRT FQGLRIAVND ELGSLEKFIA QAPHWLKSGG KFGIISFHSL
1wg8A     188   rraghparkt fqalriyvnd elnalkefle qaaevlapgg rlvviafhsl
                                                                      
TARGET                hhhh hhhhhhh    hhhhhhhhhh hhhhh    s ssssss  hh
1wg8A                 hhhh hhhhhhh    hhhhhhhhhh hhhhh    s ssssss  hh


TARGET    259   EDRIVKHRFR ETENLRVLTK KPIIAGEEEQ RQNPRARSAK LRWAEKI   
1wg8A     238   edrvvkrflr es-glkvltk kplvpsekea aqnprarsak lraaekea  
                                                                      
TARGET          hhhhhhhhhh      sss         hhhh h   hhh  s ssssss    
1wg8A           hhhhhhhhhh h    sss         hhhh h   hhh  s ssssss

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: f79664c9e5d8fa7b0782d18199b58b28 on BC2-cluster at Sun Aug 31 05:51:51 2008 
NO HITS FOUND IN BLAST-SEARCH FOR SEQID-CUTOFF 60 GO TO HHSEARCH


############# TEMPLATES SELECTED #############

>f79664c9e5d8fa7b0782d18199b58b28
*****************************************************************************
>1wg8A Evalue:0 SeqID:45.578 Method:HHSEARCH Type:MODEL
-----****************--****************************-*************************


TEMPLATE ID    START          STOP           METHOD         STATUS         
1wg8A          20             305            HHSEARCH       BUILT          

FINISHED PIPELINE ON ID: f79664c9e5d8fa7b0782d18199b58b28 on gopt-6.cluster.bc2.ch BC2-Cluster at
Sun Aug 31 05:56:21 2008


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.