SWISS-MODEL Repository - Model Details

Model Overview
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1
495

Sequence
UniProt P74260
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
FGGY_N
FGGY_C

Model 3D Structure
Model information:
Modelled residue range: 8 to 460
Based on template: [ 2dpn ]  
Sequence Identity [%]: 49%
Model date: 2008-08-30
Revision date: 2008-08-30

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-08-30. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    8       YVMALDLG TTGNRAILFD YEGNIVGQAY KELTQFYPKA GWVEHDALEI
2dpnA     3       fllaldqg ttssrailft legrpvavak refrqlypkp gwvehdplei
                                                                      
TARGET             sssssss  sssssssss    sssssss sss          sss hhhh
2dpnA              sssssss  sssssssss    sssssss sss          sss hhhh


TARGET    56    WRDTKTVMQE VVQKTAIQPQ QIVAIGLTVQ RETCLLWDKT TGQPLHPAIV
2dpnA     51    wettlwaare vlrragaeag evlalgitnq rettllwdrk tgkplhnaiv
                                                                      
TARGET          hhhhhhhhhh hhhhh         sssssss     sssss    sss  sss
2dpnA           hhhhhhhhhh hhhhh         sssssss     sssss    sss  sss


TARGET    106   WQDRRTAHFC GELTAAGYVD EIYERTGLVL DAYFSGTKLH WLLDWVKQ-S
2dpnA     101   wqdrrttplc ealrakglep lfrertgllf dpyfsgtklv wllenvpglk
                                                                      
TARGET                hhhh hhhhh   hh hhhhhh          hhhhh hhh       
2dpnA                hhhhh hhhhh   hh hh   h          hhhhh hhh     hh


TARGET    155   KSVDPANLLA GTIDSWALWN LTGGKVHRTD HSNASRTMVL NLDSLIWDEK
2dpnA     151   araegggvaf gtvdtwliwn ltggkvhatd ptnasrtllf nlhtlawdpe
                                                                      
TARGET            hh  ssss s hhhhhhhh h     sss  hhhh               hh
2dpnA           hhhh  ssss s hhhhhhhh h     sss  hhhh               hh


TARGET    205   LLDLFTIPAQ IMPEVQPSLS YFGVTDPEIL GVEIPITAIF GDQQAALYAH
2dpnA     201   llealgipaa llpevrpsdg dfgetlpell gapvpirgvl gdqqaalfgq
                                                                      
TARGET          hhhhh         sss       sss  hhh    sss sss sshhhhhhh 
2dpnA           hhhhh         sss       sss  hhh    sss   s sshhhhhhh 


TARGET    255   GCDRPGLLKC TYGTGAFLVA NTGQTVTRSQ HRLLSTVAWT QTNRDKSLTR
2dpnA     251   aalgggegkc tygtgaflll ntgkrpvlse kgllatvaws lg-----gra
                                                                      
TARGET                ssss sss ssssss ss            sssssss s       ss
2dpnA                 ssss sss ssssss ss            sssssss s       ss


TARGET    305   DYALEGSMFT AGSCVQWLRD KLGLIESAAA SESLARSVDS NGGVYFVPAL
2dpnA     296   tyalegslfv agaavgwlke vgli-resae vealaasved tgdvyfvpaf
                                                                      
TARGET          ssssssss     hhhhhhhh h       hh hhhhhh         sss   
2dpnA           ssssssss     hhhhhhhh h       hh hhhhhh         sss   


TARGET    355   SGLGAPHWDM NACGAFLGLT AGVTKAHLVR SVLEAIAFQA REVVEAINQD
2dpnA     345   tglgapywdp yargtllglt rgtsrahlar aalegvafqv rdvvlameee
                                                                      
TARGET                         sss        hhhhhh hhhhhhhhhh hhhhhhh   
2dpnA                          sss        hhhhhh hhhhhhhhhh hhhhhhh   


TARGET    405   SPAPIQQLKV DGGACNNDFL MQCQADVLGI PVERPAVLDA TAQGAAFGAG
2dpnA     395   agvrlkvlka dggmaqnrlf lkiqadllgv pvavpevtet talgaalmag
                                                                      
TARGET                 sss s      hhh hhhhhhhh   sss      h hhhhhhhhhh
2dpnA                  sss s      hhh hhhhhhhh   ssssss   h hhhhhhhhhh


TARGET    455   LKIGWN --- ---------- ---------- ---------- ----------
2dpnA     445   vgagalsped vagrfreaer flptmpegrr ealyrrwrea verakgware
                                                                      
TARGET          hhh                                                   
2dpnA           hhh     hh hhhh sssss s     hhhh hhhhhhhhhh hhhh

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: 95415fb75308c0a619c0c2867a797db5 on BC2-cluster at Sat Aug 30 04:20:47 2008 
NO HITS FOUND IN BLAST-SEARCH FOR SEQID-CUTOFF 60 GO TO HHSEARCH


############# TEMPLATES SELECTED #############

>95415fb75308c0a619c0c2867a797db5
***********************************************************************************
>2dpnA Evalue:0 SeqID:49.780 Method:HHSEARCH Type:MODEL
-************************************************-***************************------


TEMPLATE ID    START          STOP           METHOD         STATUS         
2dpnA          8              460            HHSEARCH       BUILT          

FINISHED PIPELINE ON ID: 95415fb75308c0a619c0c2867a797db5 on gopt-61.cluster.bc2.ch BC2-Cluster at
Sat Aug 30 04:24:53 2008


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.