SWISS-MODEL Repository - Model Details

Model Overview
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1
204

Sequence
UniProt P92792
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
TOM20_plant

Model 3D Structure
Model information:
Modelled residue range: 1 to 143
Based on template: [ 1zu2 ]  
Sequence Identity [%]: 60%
Model date: 2008-09-01
Revision date: 2008-09-01

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-09-01. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    1            MEM QSEFDRLLFF EHARKSAETT YAQNPLDADN LTRWGGALLE
1zu2A     65532  gplgs--mdt etefdrillf eqirqdaent yksnpldadn ltrwggvlle
                                                                      
TARGET                        hhhhhhh hhhhhhhhhh hhh    hhh hhhhhhhhhh
1zu2A                         hhhhhhh hhhhhhhhhh hhh    hhh hhhhhhhhhh


TARGET    44    LSQFQPVAES KQMISDATSK LEEALTVNPE KHDALWCLGN AHTSHVFLTP
1zu2A     44    lsqfhsisda kqmiqeaitk feeallidpk kdeavwcign aytsfafltp
                                                                      
TARGET          hhh   hhhh hhhhhhhhhh hhhhhhh     hhhhhhhhh hhhhhhhh  
1zu2A           hhh   hhhh hhhhhhhhhh hhhhhhh     hhhhhhhhh hhhhhhhh  


TARGET    94    DMDEAKVYFE KATQCFQQAF DADPSNDLYR KSLEVTAKAP ELHMEIHRHG
1zu2A     94    deteakhnfd latqffqqav deqpdnthyl kslemtakap qlhaeaykqg
                                                                      
TARGET           hhhhhhhhh hhhhhhhhhh h     hhhh hhhhhh   h hhhhhhhh  
1zu2A            hhhhhhhhh hhhhhhhhhh hh    hhhh hhhhhh   h hhhhhhhh  


TARGET           ---------                                            
1zu2A     144   lggshhhhhh                                            
                                                                      
TARGET                                                                
1zu2A

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: 40f488ce496271e2765d845fc4a7dfb1 on BC2-cluster at Mon Sep  1 03:52:49 2008 
BLAST_TEMPLATE SELECTION SUCCESSFUL TEMPLATES FOUND:  1 BUT STILL ROOM FOR IMPROVEMENT GO TO
HHSEARCH


############# TEMPLATES SELECTED #############

>40f488ce496271e2765d845fc4a7dfb1
********************************************************************
>1zu2A Evalue:1.24651e-44 SeqID:60.140 Method:BLAST Type:MODEL
************************************************--------------------


TEMPLATE ID    START          STOP           METHOD         STATUS         
1zu2A          1              143            BLAST          BUILT          

FINISHED PIPELINE ON ID: 40f488ce496271e2765d845fc4a7dfb1 on ms-3.cluster.bc2.ch BC2-Cluster at Mon
Sep  1 03:54:58 2008


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.