SWISS-MODEL Repository - Model Details

Model Overview
Click on the bars to get more details about individual Models or experimental structures

Sequence
UniProt P97872
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
FMO-like

Model 3D Structure
Model information:
Modelled residue range: 312 to 441
Based on template: [ 2xve ]  
Sequence Identity [%]: 32%
Model date: 2013-02-17
Revision date: 2013-01-30

Quaternary structure information: [details]
Template (2xve): DIMER
Model built: SINGLE CHAIN

Ligand information: [details]
Ligands in the template: FAD: 1, GOL: 2, NO3: 2.
Ligands in the model: none.
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2013-01-30. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment

                                                       
2xveB     2     atriailgag psgmaqlraf qsaqekgaei pelvcfekqa dwggqwnytw
                                                                      
                                                       
2xveB            sssssss   hhhhhhhhhh hhhhh       ssssss              


                                                       
2xveB     52    rtgldengep vhssmyrylw sngpkeclef adytfdehfg kpiasyppre
                                                                      
                                                       
2xveB             sss   ss s       ss s              hhhhh        sssh


                                                       
2xveB     102   vlwdyikgrv ekagvrkyir fntavrhvef nedsqtftvt vqdhttdtiy
                                                                      
                                                       
2xveB           hhhhhhhhhh hh   hh  s ssssssssss s    sssss ssss   sss


                                                       
2xveB     152   seefdyvvcc tghfstpyvp efegfekfgg rilhahdfrd alefkdktvl
                                                                      
                                                       
2xveB           ssss sssss      sss              sssss            ssss


                                                       
2xveB     202   lvgssysaed igsqcykyga kkliscyrta pmgykwpenw derpnlvrvd
                                                                      
                                                       
2xveB           sss   hhhh hhhhhhhh    sssss             ss sss ssssss


TARGET    1          AVFED GSREDGIDVV IFATGYSFAF PFLEDSVKVV KNKVSLYKKV
2xveB     252   ten--ayfad gssek-vdai ilctgyihhf pflnddlrlv tnn-----rl
                                                                      
TARGET                                                                
2xveB            ss  ssss     ss s ss sss sss                         


TARGET    46    FPPN------ -LEKPTLAII GLIQPLGAIM PISELQGRWA TQVFKGLKKL
2xveB     294   wplnlykgvv wednpkffyi gm-qdqwysf nmfdaqawya rdvimgrlpl
                                                                      
TARGET                                         h hhhhhhhhhh hhhhh     
2xveB              sss  ss ss   sssss          h hhhhhhhhhh hhhhh     


TARGET    89    PSQSEMMAEI NKAREEMAKR YVDSQRHTIQ GDYIDTMEEI AD -------
2xveB     343   pskeemkads mawrekeltl vtaeemytyq gdyiqnlidm tdypsfdipa
                                                                      
TARGET            hhhhhhhh hhhhhhhh     hhhhhhhh hhhhhhhhh            
2xveB             hhhhhhhh hhhhhhhh     hhhhhhhh hhhhhhhhh         hhh


TARGET          ---------- ---------- ---------- ---------- ----------
2xveB     393   tnktflewkh hkkenimtfr dhsyrslmtg tmapkhhtpw idalddslea
                                                                      
TARGET                                                                
2xveB           hhhhhhhhhh hhhh          sss     sss               hhh


TARGET          -----                                                 
2xveB     443   ylsdk                                                 
                                                                      
TARGET                                                                
2xveB           hh                                                    



Quality


Template's ligands section
Ligands in the template: FAD: 1, GOL: 2, NO3: 2.
Ligands in the template that will be assessed: FAD465.
Model's ligands section
FAD465
Not all the residues interacting with the ligand are completely conserved between model and template.
No RMSD calculation will be performed.
Given the properties calculated previously, the ligand B.FAD465 will not be included in the model.
FAD465: conservation:False, RMSD:False, included: False

No ligands were included in the model.


Quaternary Structure Annotation of the Template
2xve is annotated as DIMER
The oligomeric state of the structure was assigned by the authors of the corresponding PDB entry
The following biological unit was used to build the template structure: 2xve.pdb1.gz

Quaternary Structure Modelling of the Target Protein
Analysis of evolutionary and family specific aspects revealed non-conservation of the oligomeric structure
Hence, the oligomeric structures of the target and the template cannot be assumed to be similar (=DIMER)
The target structure was calculated as SINGLE CHAIN
The corresponding reliability score is 0.008 (>0.5 indicates similarity)
To build the complex the following chains of the complex has been additionally identified: 2xveA


Template Selection
 - Start SMR-Pipeline for:97339fbaf8b8d041ac80edfbc070ba74 on BC2-cluster at Sun Feb 17 01:59:03
2013 


 - Analyze BLAST summary ... 
 - No templates found with BLAST (seqid-cutoff: 60): go to HHSEARCH

FATAL - No A3m found

 - Run HHSearch to detect more templates...
FATAL - No md5 found in hash for: 3v3oA
FATAL - No md5 found in hash for: 3v3oB
FATAL - No md5 found in hash for: 3v3oD
FATAL - No md5 found in hash for: 3v3oC
FATAL - No md5 found in hash for: 3v3oA
FATAL - No md5 found in hash for: 3v3oB
FATAL - No md5 found in hash for: 3v3oD
FATAL - No md5 found in hash for: 3v3oC
 - Generate new template library
 - Run template selection against modfied template library 
 - Summarize templates: 
 - No template with A found
 - No template with B found
 - No template with B found
 - No template with A found
 - No template with B found
 - No template with A found
 - No template with B found
 - No template with A found
 - No template with A found
 - No template with B found
 - No template with B found
 - No template with A found
 - No template with A found
 - No template with B found
 - Proof template(s) selection compared to previous Repository update
 - Different number of templates selected (old0 vs new:6): model based on new templates
 - Send 6 Templates for modeling

 - @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@
 -                                                ********************
 - building model based on 2xveB (312-441) was successful 
 - ******
 - building model based on 1rsgA (2-43) was successful 
 -  ********************************
 - building model based on 2xveB (5-219) was not successful go to next best template
 -  ********************************
 - building model based on 2xveA (5-219) was successful 
 -                             ***********************
 - building model based on 3v3nA (184-335) was not successful go to next best template
 -                            ***********************
 - building model based on 4a6nC (183-335) was successful 
 -  ********************************************************
 - building model based on 4a5lB (4-373) was not successful go to next best template
 -  ********************************************************
 - building model based on 4a5lA (4-373) was successful 
 -  ***********************************************************
 - building model based on 4eqsB (5-398) was successful 
 - Repository Pipeline parameter

   Cut-off parameters to model the target based on a BLAST target-template alignment
    Evalue :                                     0.0001
    Minimum Template size (aa) for ranking :     25
    Minimum Sequence identity :                  60

   Cut-off parameters to model the target based on a HHSearch target-template alignment
    Evalue :                                     0.0001
    Probability :                                50
    MAC :                                        0.3

   Parameters for model selection
    Minimal number of uncovered target
     residues after BLAST to run HHSEARCH :      50
    Minimal number of uncovered target
     residues to model an additional template :  25
    
 - Finish SMR-Pipeline for:97339fbaf8b8d041ac80edfbc070ba74 on BC2-cluster at Sun Feb 17 02:49:13
2013 




Template Description
Match Chain SeqId

4hb9: CRYSTAL STRUCTURE OF A PUTATIVE FAD CONTAINING MONOOXYGENAPHOTORHABDUS LUMINESCENS SUBSP. LAUMONDII TTO1 (TARGET PS
Solved by: X-RAY, Resolution: 1.93A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

187-220 4hb9A 29%
[Model]
4-154 4hb9A 11%
[Model]

1rsg: CRYSTAL STRUCTURE OF THE POLYAMINE OXIDASE FMS1 FROM YEAST
Solved by: X-RAY, Resolution: 1.90A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

185-217 1rsgA 26%
[Model]
3-43 1rsgB 30%
[Model]
289-331 1rsgB 21%
[Model]
2-43 1rsgA 32%
[Model]

2y6r: STRUCTURE OF THE TETX MONOOXYGENASE IN COMPLEX WITH THE SUBSTRATE 7-CHLORTETRACYCLINE
Solved by: X-RAY, Resolution: 3.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

185-219 2y6rA 26%
[Model]
2-155 2y6rA 14%
[Model]
185-219 2y6rB 26%
[Model]
2-155 2y6rB 14%
[Model]
185-219 2y6rC 26%
[Model]
2-154 2y6rC 13%
[Model]
184-220 2y6rD 24%
[Model]
2-155 2y6rD 15%
[Model]

3v3n: CRYSTAL STRUCTURE OF TETX2 T280A: AN ADAPTIVE MUTANT IN COMINOCYCLINE
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1-155 3v3nA 14%
[Model]
184-219 3v3nB 25%
[Model]
1-155 3v3nB 14%
[Model]
184-219 3v3nC 25%
[Model]
1-155 3v3nC 14%
[Model]
183-336 3v3nD 16%
[Model]
1-154 3v3nD 15%
[Model]
184-335 3v3nA 17%
[Model]

2xyo: STRUCTURAL BASIS FOR A NEW TETRACYCLINE RESISTANCE MECHANION THE TETX MONOOXYGENASE
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

184-335 2xyoA 17%
[Model]
2-155 2xyoA 14%
[Model]
184-335 2xyoB 17%
[Model]
2-155 2xyoB 14%
[Model]
184-219 2xyoC 25%
[Model]
2-154 2xyoC 15%
[Model]
185-219 2xyoD 26%
[Model]
3-154 2xyoD 16%
[Model]

2xdo: STRUCTURE OF THE TETRACYCLINE DEGRADING MONOOXYGENASE TETXBACTEROIDES THETAIOTAOMICRON
Solved by: X-RAY, Resolution: 2.09A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

183-219 2xdoA 24%
[Model]
1-154 2xdoA 14%
[Model]
184-219 2xdoB 25%
[Model]
1-154 2xdoB 15%
[Model]
183-219 2xdoC 24%
[Model]
1-155 2xdoC 16%
[Model]
183-335 2xdoD 17%
[Model]
1-154 2xdoD 16%
[Model]

4a65: CRYSTAL STRUCTURE OF THE THIOREDOXIN REDUCTASE FROM ENTAMOHISTOLYTICA WITH AUCN
Solved by: X-RAY, Resolution: 1.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

187-217 4a65A 16%
[Model]
186-217 4a65B 16%
[Model]
312-340 4a65B 24%
[Model]
319-373 4a65A 18%
[Model]
4-373 4a65B 13%
[Model]
4-219 4a65A 17%
[Model]

4a5l: CRYSTAL STRUCTURE OF THE THIOREDOXIN REDUCTASE FROM ENTAMOHISTOLYTICA
Solved by: X-RAY, Resolution: 1.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

187-217 4a5lB 16%
[Model]
186-217 4a5lA 16%
[Model]
312-341 4a5lB 23%
[Model]
312-340 4a5lA 24%
[Model]
4-373 4a5lA 13%
[Model]
4-373 4a5lB 13%
[Model]

4a6n: STRUCTURE OF THE TETRACYCLINE DEGRADING MONOOXYGENASE TETXIN COMPLEX WITH TIGECYCLINE
Solved by: X-RAY, Resolution: 2.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

183-335 4a6nA 17%
[Model]
1-154 4a6nA 16%
[Model]
183-219 4a6nB 24%
[Model]
1-154 4a6nB 13%
[Model]
1-154 4a6nC 16%
[Model]
183-335 4a6nD 17%
[Model]
1-154 4a6nD 16%
[Model]
183-335 4a6nC 17%
[Model]

3p9u: CRYSTAL STRUCTURE OF TETX2 FROM BACTEROIDES THETAIOTAOMICRSUBSTRATE ANALOGUE
Solved by: X-RAY, Resolution: 2.81A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

183-219 3p9uA 24%
[Model]
1-155 3p9uA 16%
[Model]
184-219 3p9uB 25%
[Model]
1-154 3p9uB 15%
[Model]
183-219 3p9uC 24%
[Model]
1-154 3p9uC 16%
[Model]
183-219 3p9uD 24%
[Model]
1-155 3p9uD 15%
[Model]

4a99: STRUCTURE OF THE TETRACYCLINE DEGRADING MONOOXYGENASE TETXCOMPLEX WITH MINOCYCLINE
Solved by: X-RAY, Resolution: 2.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

183-219 4a99A 24%
[Model]
1-154 4a99A 13%
[Model]
183-219 4a99B 24%
[Model]
1-154 4a99B 13%
[Model]
183-335 4a99C 17%
[Model]
1-154 4a99C 16%
[Model]
183-335 4a99D 17%
[Model]
1-154 4a99D 16%
[Model]

2y6q: STRUCTURE OF THE TETX MONOOXYGENASE IN COMPLEX WITH THE SU7-IODTETRACYCLINE
Solved by: X-RAY, Resolution: 2.37A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

183-219 2y6qA 24%
[Model]
1-154 2y6qA 14%
[Model]
183-219 2y6qB 24%
[Model]
1-154 2y6qB 14%
[Model]
183-219 2y6qC 24%
[Model]
1-155 2y6qC 14%
[Model]
183-219 2y6qD 24%
[Model]
1-155 2y6qD 14%
[Model]

1z6l: CRYSTAL STRUCTURE OF FMS1 IN COMPLEX WITH ITS SUBSTRATE
Solved by: X-RAY, Resolution: 2.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

2-41 1z6lA 32%
[Model]
3-42 1z6lB 29%
[Model]
289-331 1z6lB 21%
[Model]
288-333 1z6lA 22%
[Model]

3bi4: CRYSTAL STRUCTURES OF FMS1 IN COMPLEX WITH ITS INHIBITORS
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

2-41 3bi4A 32%
[Model]
3-41 3bi4B 30%
[Model]
289-331 3bi4B 21%
[Model]
289-333 3bi4A 22%
[Model]

3bnm: CRYSTAL STRUCTURE OF POLYAMINE OXIDASE FMS1 FROM SACCHAROMYCES CEREVISIAE IN COMPLEX WITH BIS-(3R,3'R)- METHYLATED SPERMINE
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

2-41 3bnmA 32%
[Model]
3-43 3bnmB 30%
[Model]
289-331 3bnmB 21%
[Model]
289-333 3bnmA 22%
[Model]

3bnu: CRYSTAL STRUCTURE OF POLYAMINE OXIDASE FMS1 FROM SACCHAROMYCES CEREVISIAE IN COMPLEX WITH BIS-(3S,3'S)- METHYLATED SPERMINE
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

2-41 3bnuA 32%
[Model]
3-43 3bnuB 30%
[Model]
289-331 3bnuB 21%
[Model]
289-333 3bnuA 22%
[Model]

3bi5: CRYSTAL STRUCTURES OF FMS1 IN COMPLEX WITH ITS INHIBITORS
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

2-41 3bi5A 32%
[Model]
3-43 3bi5B 30%
[Model]
289-331 3bi5B 21%
[Model]
289-333 3bi5A 22%
[Model]

3cns: CRYSTAL STRUCTURE OF FMS1 IN COMPLEX WITH S-BZ-MESPERMIDIN
Solved by: X-RAY, Resolution: 2.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

186-216 3cnsB 25%
[Model]
4-41 3cnsB 28%
[Model]
2-41 3cnsA 32%
[Model]
288-333 3cnsA 22%
[Model]

4gdp: YEAST POLYAMINE OXIDASE FMS1, N195A MUTANT
Solved by: X-RAY, Resolution: 2.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

2-42 4gdpA 31%
[Model]
2-41 4gdpB 32%
[Model]
288-332 4gdpB 20%
[Model]
287-333 4gdpA 21%
[Model]
3-41 4gdpC 30%
[Model]
4-42 4gdpD 28%
[Model]
290-332 4gdpD 21%
[Model]
289-333 4gdpC 23%
[Model]

1xpq: CRYSTAL STRUCTURE OF FMS1, A POLYAMINE OXIDASE FROM YEAST
Solved by: X-RAY, Resolution: 2.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

3-41 1xpqB 30%
[Model]
2-41 1xpqA 32%
[Model]
288-331 1xpqB 20%
[Model]
287-332 1xpqA 20%
[Model]
3-43 1xpqD 30%
[Model]
2-43 1xpqC 32%
[Model]
288-332 1xpqD 20%
[Model]
287-332 1xpqC 20%
[Model]

3cn8: CRYSTAL STRUCTURE OF FMS1 IN COMPLEX WITH SPERMIDINE
Solved by: X-RAY, Resolution: 2.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

2-41 3cn8A 32%
[Model]
3-43 3cn8B 30%
[Model]
289-331 3cn8B 21%
[Model]
289-332 3cn8A 20%
[Model]

3cnd: CRYSTAL STRUCTURE OF FMS1 IN COMPLEX WITH N1-ACSPERMINE
Solved by: X-RAY, Resolution: 2.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

2-41 3cndA 32%
[Model]
3-43 3cndB 30%
[Model]
289-331 3cndB 21%
[Model]
289-332 3cndA 20%
[Model]

3cnt: CRYSTAL STRUCTURE OF FMS1 IN COMPLEX WITH R-BZ-MESPERMIDIN
Solved by: X-RAY, Resolution: 2.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

2-41 3cntA 32%
[Model]
3-41 3cntB 30%
[Model]
289-333 3cntA 22%
[Model]
288-332 3cntB 20%
[Model]

3bi2: CRYSTAL STRUCTURES OF FMS1 IN COMPLEX WITH ITS INHIBITORS
Solved by: X-RAY, Resolution: 2.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

2-41 3bi2A 32%
[Model]
3-43 3bi2B 30%
[Model]
289-331 3bi2B 21%
[Model]
289-332 3bi2A 20%
[Model]

4ech: YEAST POLYAMINE OXIDASE FMS1, H67Q MUTANT
Solved by: X-RAY, Resolution: 2.40A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

186-217 4echB 27%
[Model]
4-41 4echB 28%
[Model]
2-43 4echA 32%
[Model]
288-332 4echA 20%
[Model]

3cnp: CRYSTAL STRUCTURE OF FMS1 IN COMPLEX WITH S-N1- ACMESPERMIDINE
Solved by: X-RAY, Resolution: 2.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

3-43 3cnpB 30%
[Model]
2-41 3cnpA 32%
[Model]
289-331 3cnpB 21%
[Model]
289-332 3cnpA 20%
[Model]

1yy5: CRYSTAL STRUCTURE OF FMS1, A POLYAMINE OXIDASE FROM YEAST
Solved by: X-RAY, Resolution: 2.60A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

2-41 1yy5A 32%
[Model]
3-41 1yy5B 30%
[Model]
287-331 1yy5B 20%
[Model]
287-332 1yy5A 20%
[Model]

4dyd: SUBSTRATE-DIRECTED DUAL CATALYSIS OF DICARBONYL COMPOUNDS DIKETOREDUCTASE
Solved by: X-RAY, Resolution: 2.08A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1-37 4dydA 18%
[Model]

4e12: SUBSTRATE-DIRECTED DUAL CATALYSIS OF DICARBONYL COMPOUNDS DIKETOREDUCTASE
Solved by: X-RAY, Resolution: 2.08A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1-37 4e12A 18%
[Model]

4e13: SUBSTRATE-DIRECTED DUAL CATALYSIS OF DICARBONYL COMPOUNDS DIKETOREDUCTASE
Solved by: X-RAY, Resolution: 2.08A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

1-37 4e13A 18%
[Model]

2oal: REBH WITH BOUND FAD
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

83-152 2oalB 15%
[Model]
83-152 2oalA 15%
[Model]

2o9z: CRYSTAL STRUCTURE OF REBH, A FAD-DEPENDENT HALOGENASE FROMLECHEVALIERIA AEROCOLONIGENES, THE APO FORM
Solved by: X-RAY, Resolution: 2.49A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

83-152 2o9zB 15%
[Model]
83-152 2o9zA 15%
[Model]

2e4g: REBH WITH BOUND L-TRP
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

83-152 2e4gA 15%
[Model]
83-152 2e4gB 15%
[Model]

2oam: APO REBH FROM LECHEVALIERIA AEROCOLONIGENES
Solved by: X-RAY, Resolution: 2.30A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

83-152 2oamA 15%
[Model]
83-152 2oamB 15%
[Model]

4g6g: CRYSTAL STRUCTURE OF NDH WITH TRT
Solved by: X-RAY, Resolution: 2.39A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

179-221 4g6gB 16%
[Model]
174-221 4g6gA 15%
[Model]
3-193 4g6gB 8%
[Model]
2-408 4g6gA 9%
[Model]
3-403 4g6gB 9%
[Model]
86-154 4g6gA 10%
[Model]

2oa1: CRYSTAL STRUCTURE OF REBH, A FAD-DEPENDENT HALOGENASE FROMLECHEVALIERIA AEROCOLONIGENES, THE L-TRYPTOPHAN WITH FAD COMPLEX
Solved by: X-RAY, Resolution: 2.15A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

83-152 2oa1A 15%
[Model]
83-152 2oa1B 15%
[Model]

4emw: CRYSTAL STRUCTURE OF STAPHYLOCOCCUS AUREUS BOUND WITH THE INHIBITOR ETVC-COA
Solved by: X-RAY, Resolution: 2.39A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

187-219 4emwB 14%
[Model]
187-219 4emwA 14%
[Model]
3-156 4emwB 12%
[Model]
3-156 4emwA 12%
[Model]
5-399 4emwB 10%
[Model]
5-399 4emwA 10%
[Model]

1yqz: STRUCTURE OF COENZYME A-DISULFIDE REDUCTASE FROM STAPHYLOCOCCUS AUREUS REFINED AT 1.54 ANGSTROM RESOLUTION
Solved by: X-RAY, Resolution: 1.98A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

3-194 1yqzB 12%
[Model]
3-194 1yqzA 12%
[Model]
5-398 1yqzB 10%
[Model]
5-398 1yqzA 10%
[Model]

4eqr: CRYSTAL STRUCTURE OF THE Y361F MUTANT OF STAPHYLOCOCCUS AU
Solved by: X-RAY, Resolution: 1.80A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

3-156 4eqrB 12%
[Model]
3-156 4eqrA 12%
[Model]
5-398 4eqrB 10%
[Model]
5-398 4eqrA 10%
[Model]

4em4: CRYSTAL STRUCTURE OF STAPHYLOCOCCUS AUREUS BOUND WITH THE INHIBITOR PETHYL-VS-COA
Solved by: X-RAY, Resolution: 1.98A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

3-194 4em4B 12%
[Model]
3-194 4em4A 12%
[Model]
5-398 4em4B 10%
[Model]
5-398 4em4A 10%
[Model]

4eqw: CRYSTAL STRUCTURE OF THE Y361F, Y419F MUTANT OF STAPHYLOCOCOADR
Solved by: X-RAY, Resolution: 1.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

3-157 4eqwB 12%
[Model]
3-157 4eqwA 12%
[Model]
5-398 4eqwB 10%
[Model]
5-398 4eqwA 10%
[Model]

4em3: CRYSTAL STRUCTURE OF STAPHYLOCOCCUS AUREUS BOUND WITH THE INHIBITOR MEVS-COA
Solved by: X-RAY, Resolution: 1.98A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

3-194 4em3B 12%
[Model]
3-194 4em3A 12%
[Model]
5-398 4em3B 10%
[Model]
5-398 4em3A 10%
[Model]

4eqs: CRYSTAL STRUCTURE OF THE Y419F MUTANT OF STAPHYLOCOCCUS AU
Solved by: X-RAY, Resolution: 1.50A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

3-156 4eqsB 12%
[Model]
3-156 4eqsA 12%
[Model]
5-398 4eqsA 10%
[Model]
5-398 4eqsB 10%
[Model]

4eqx: CRYSTAL STRUCTURE OF THE C43S MUTANT OF STAPHYLOCOCCUS AUR
Solved by: X-RAY, Resolution: 1.70A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

3-194 4eqxB 12%
[Model]
3-194 4eqxA 12%
[Model]
5-399 4eqxB 10%
[Model]
5-399 4eqxA 10%
[Model]

4g74: CRYSTAL STRUCTURE OF NDH WITH QUINONE
Solved by: X-RAY, Resolution: 2.48A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

179-221 4g74B 16%
[Model]
177-222 4g74A 15%
[Model]
3-193 4g74B 8%
[Model]
3-403 4g74B 9%
[Model]
3-401 4g74A 9%
[Model]
86-157 4g74A 10%
[Model]

4g6h: CRYSTAL STRUCTURE OF NDH WITH NADH
Solved by: X-RAY, Resolution: 2.52A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

179-221 4g6hB 16%
[Model]
179-221 4g6hA 16%
[Model]
3-193 4g6hB 8%
[Model]
3-193 4g6hA 8%
[Model]
3-403 4g6hB 9%
[Model]
3-403 4g6hA 9%
[Model]

4g73: CRYSTAL STRUCTURE OF NDH WITH NADH AND QUINONE
Solved by: X-RAY, Resolution: 2.52A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

179-221 4g73B 16%
[Model]
179-221 4g73A 16%
[Model]
3-193 4g73B 8%
[Model]
3-193 4g73A 8%
[Model]
3-403 4g73B 9%
[Model]
3-403 4g73A 9%
[Model]

4g9k: STRUCTURE OF THE NDI1 PROTEIN FROM SACCHAROMYCES CEREVISIA
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

179-221 4g9kA 16%
[Model]
179-221 4g9kB 16%
[Model]
3-193 4g9kA 8%
[Model]
3-193 4g9kB 8%
[Model]
3-403 4g9kA 9%
[Model]
3-403 4g9kB 9%
[Model]

4gap: STRUCTURE OF THE NDI1 PROTEIN FROM SACCHAROMYCES CEREVISIAWITH NAD+
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

179-221 4gapB 16%
[Model]
179-221 4gapA 16%
[Model]
3-193 4gapB 8%
[Model]
3-193 4gapA 8%
[Model]
3-403 4gapB 9%
[Model]
3-403 4gapA 9%
[Model]

4gav: STRUCTURE OF THE NDI1 PROTEIN FROM SACCHAROMYCES CEREVISIAWITH QUINONE
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ]   [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  

179-221 4gavA 16%
[Model]
179-221 4gavB 16%
[Model]
3-193 4gavA 8%
[Model]
3-193 4gavB 8%
[Model]
3-403 4gavA 9%
[Model]
3-403 4gavB 9%
[Model]

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Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.




SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.