SWISS-MODEL Repository

[ Repository Query ] [ Full Text Query ]

SWISS-MODEL Repository - Model Details

Model Overview

Click on the bars to get more details about individual Models or experimental structures

608

Sequence

UniProt

Q03195

Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

STRING

Q03195: 4932.YDR091C

Domain

Link to: [ InterPro ]

	ABC_tran
	ABC_tran
	Fer4
	RLI

Model 3D Structure

	Model information:
	Modelled residue range:	80 to 603
	Based on template:	[ 1yqt ]
	Sequence Identity [%]:	49%
	Model date:	2013-02-18
	Revision date:	2013-01-30

Quaternary structure information:	[details]
Template (1yqt): MONOMER Model: MONOMER

Ligand information:	[details]
Ligands in the template: ADP: 2, MG: 2. Ligands in the model: ADP: 2, MG: 2

Template Links: [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2013-01-30. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]

Alignment


TARGET    1       EAHVTHRY SANSFKLHRL PTPRPGQVLG LVGTNGIGKS TALKILAGKQ
1yqt_1#8  76      eedcvhry gvnafvlyrl pvvkegxvvg ivgpngtgks tavkilagql
                                                                      
TARGET              ssssss s  ssssss        ssss ss      hh hhhhhhh   
1yqt_1#8            ssssss s  ssssss        ssss ss      hh hhhhhhh   


TARGET    49    KPNLGRFDDP PEWQEIIKYF RGSELQNYFT KMLEDDIKAI IKPQYVDNIP
1yqt_1#8  124   ipnlcgdnd- -swdgviraf rgnelqnyfe klkngeirpv vkpqyvdlip
                                                                      
TARGET                        hhhhhh      hhhhhh hhhh     s ss    hhh 
1yqt_1#8                      hhhhhh      hhhhhh hhhh     s ss        


TARGET    99    RAIKGPVQKV GELLKLRMEK SPEDVKRYIK ILQLENVLKR DIEKLSGGEL
1yqt_1#8  172   kavkg---kv iellkkadet g--kleevvk alelenvler eiqhlsggel
                                                                      
TARGET                   h hhhhhhh        hhhhhh h                hhhh
1yqt_1#8            s   ss hhhhhhh        hhhhhh h      h s ss    hhhh


TARGET    149   QRFAIGMSCV QEADVYMFDE PSSYLDVKQR LNAAQIIRSL LAPTKYVICV
1yqt_1#8  217   qrvaiaaall rnatfyffde pssyldirqr lnaarairrl seegksvlvv
                                                                      
TARGET          hhhhhhhhh     sssssss       hhhh hhhhhhhhhh h    sssss
1yqt_1#8        hhhhhhhhh     sssssss       hhhh hhhhhhhhhh hh   sssss


TARGET    199   EHDLSVLDYL SDFVCIIYGV PSVYGVVTLP ASVREGINIF LDGHIPAENL
1yqt_1#8  267   ehdlavldyl sdiihvvyge pgvygifsqp kgtrnginef lrgylkdenv
                                                                      
TARGET          s  hhhhhhh   ssssssss   ssssss     hhhhhhhh hh        
1yqt_1#8        s  hhhhhhh   ssssssss   ssssss     hhhhhhhh hh        


TARGET    249   RFRTEALQFR IADATEDLQN DSASRAFSYP SLKKTQGDFV LNVEEGEFSD
1yqt_1#8  317   rfrpyeikft ktgerveier etl---vtyp rlvkdygsfr levepgeikk
                                                                      
TARGET                                      sss   sssss  ss ssss sss  
1yqt_1#8                              sss   sss   sssss  ss ssss sssss


TARGET    299   SEILVMMGEN GTGKTTLIKL LAGALKPDEG QDIPKLNVSM KPQKIAPKFP
1yqt_1#8  364   gevigivgpn gigkttfvkx lagveepteg kiewdltvay kpqyikadye
                                                                      
TARGET           ssssss       hhhhhhh hh               ssss s         
1yqt_1#8         ssssss       hhhhhhh hh               ssss s         


TARGET    349   GTVRQLFFKK IRGQFLNPQF -QTDVVKPLR IDDIIDQEVQ HLSGGELQRV
1yqt_1#8  414   gtvyell-sk idasklnsnf yktellkplg iidlydrevn elsggelqrv
                                                                      
TARGET          ssshhhhhh    hhhh                 h    sss     hhhhhhh
1yqt_1#8        ssshhhh hh    hh   hh hhh   hh    h    sss     hhhhhhh


TARGET    398   AIVLALGIPA DIYLIDEPSA YLDSEQRIIC SKVIRRFILH NKKTAFIVEH
1yqt_1#8  463   aiaatllrda diylldepsa yldveqrlav srairhlxek nektalvveh
                                                                      
TARGET          hhhhhh     sssssss       hhhhhhh hhhhhhhhhh h  ssssss 
1yqt_1#8        hhhhhh      ssssss       hhhhhhh hhhhhhhhhh h  ssssss 


TARGET    448   DFIMATYLAD KVIVFEGIPS KNAHARAPES LLTGCNRFLK NLNVTFRRDP
1yqt_1#8  513   dvlxidyvsd rlxvfegepg kygralppxg xregxnrfla sigitfrrdp
                                                                      
TARGET           hhhhhhh   ssssssss   ssssss     hhhhhhhhhh     sssss 
1yqt_1#8         hhhhhhh   ssssssss   ssssss     hhhhhhhhhh     sssss 


TARGET    498   NSFRPRINKL DSQMDKEQKS SGNYFFL                         
1yqt_1#8  563   dtgrpranke gsvkdreqke kgeyyyia                        
                                                                      
TARGET             sssss     hhhhhhhh h                               
1yqt_1#8           sssss     hhhhhhhh h

Quality

[ start new quality assessment in Workspace ]

Ligand Modelling Log

Template's ligands section 
Ligands in the template: ADP: 2, MG: 2. 
Ligands in the template that will be assessed: ADP3, ADP4, MG1, MG2. 
Model's ligands section 
ADP3 
ADP3 interacts, within a radius of 3 Angstroem, with the following ions: MG1. They will be considered as a single ligand. 
All the residues interacting with the ligand are completely conserved between model and template. 
The RMSD between the interacting residues of model and template is smaller than 2 Angstrom: 0.080 
Given the properties calculated previously, the ligand z.ADP3 will be included in the model. 
ADP3: conservation:True, RMSD:True, included: True 
 
ADP4 
ADP4 interacts, within a radius of 3 Angstroem, with the following ions: MG2. They will be considered as a single ligand. 
All the residues interacting with the ligand are completely conserved between model and template. 
The RMSD between the interacting residues of model and template is smaller than 2 Angstrom: 0.040 
Given the properties calculated previously, the ligand z.ADP4 will be included in the model. 
ADP4: conservation:True, RMSD:True, included: True 
 
The new model with the included ligands was saved successfully.

Oligomer Modelling Log

Quaternary Structure Annotation of the Template 
 1yqt is annotated as MONOMER 
 The oligomeric state of the structure was assigned by the authors of the corresponding PDB entry 
 The following biological unit was used to build the template structure: 1yqt.pdb1.gz 
      
 
Quaternary Structure Modelling of the Target Protein 
 Analysis of evolutionary and family specific aspects revealed conservation of the oligomeric structure 
 Hence, the oligomeric structures of the target and the template can be assumed to be similar (=MONOMER) 
 The corresponding reliability score is 0.54 (>0.5 indicates similarity) 
 Model was succesfully built as MONOMER.

Template Selection

 - Start SMR-Pipeline for:17e51a682d4f83612367e0e6718555f1 on BC2-cluster at Mon Feb 18 15:07:27
2013 


 - Analyze BLAST summary ... 
 - No templates found with BLAST (seqid-cutoff: 60): go to HHSEARCH

 - Run HHSearch to detect more templates...
 - Generate new template library
 - Run template selection against modfied template library 
 - Summarize templates: 
 - No template with C found
 - No template with D found
 - No template with E found
 - No template with H found
 - No template with I found
 - No template with J found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with D found
 - No template with B found
 - No template with D found
 - No template with B found
 - No template with D found
 - No template with E found
 - No template with F found
 - No template with E found
 - No template with F found
 - No template with G found
 - No template with E found
 - No template with F found
 - No template with G found
 - No template with E found
 - No template with F found
 - No template with G found
 - No template with E found
 - No template with F found
 - No template with G found
 - No template with E found
 - No template with F found
 - No template with G found
 - No template with E found
 - No template with F found
 - No template with G found
 - No template with A found
 - No template with B found
 - No template with E found
 - No template with F found
 - No template with G found
 - No template with J found
 - No template with A found
 - No template with B found
 - No template with F found
 - No template with D found
 - No template with D found
 - No template with A found
 - No template with C found
 - No template with A found
 - No template with C found
 - No template with A found
 - No template with C found
 - No template with B found
 - No template with C found
 - No template with B found
 - No template with C found
 - No template with B found
 - No template with C found
 - No template with B found
 - No template with C found
 - No template with B found
 - No template with C found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with C found
 - No template with A found
 - No template with C found
 - No template with A found
 - No template with C found
 - No template with B found
 - No template with I found
 - No template with J found
 - No template with L found
 - No template with F found
 - No template with A found
 - No template with C found
 - No template with D found
 - No template with E found
 - No template with F found
 - No template with E found
 - No template with F found
 - No template with G found
 - No template with E found
 - No template with F found
 - No template with G found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with D found
 - No template with C found
 - No template with D found
 - No template with E found
 - No template with G found
 - No template with F found
 - No template with E found
 - No template with G found
 - No template with F found
 - No template with E found
 - No template with G found
 - No template with F found
 - No template with E found
 - No template with G found
 - No template with F found
 - No template with D found
 - No template with A found
 - No template with D found
 - No template with A found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with A found
 - No template with A found
 - No template with A found
 - No template with E found
 - No template with F found
 - No template with G found
 - No template with E found
 - No template with F found
 - No template with G found
 - No template with E found
 - No template with F found
 - No template with G found
 - No template with E found
 - No template with F found
 - No template with G found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with B found
 - No template with A found
 - No template with A found
 - No template with A found
 - No template with A found
 - No template with A found
 - No template with A found
 - No template with H found
 - No template with I found
 - No template with F found
 - No template with G found
 - No template with H found
 - No template with I found
 - No template with F found
 - No template with G found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with E found
 - No template with A found
 - No template with B found
 - No template with F found
 - No template with A found
 - No template with B found
 - No template with A found
 - No template with B found
 - No template with A found
 - No template with B found
 - No template with D found
 - No template with A found
 - No template with B found
 - No template with C found
 - No template with A found
 - No template with B found
 - Proof template(s) selection compared to previous Repository update
 - Different number of templates selected (old0 vs new:2): model based on new templates
 - Send 2 Templates for modeling

 - @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@
 -            *********************************************************************
 - building model based on 1yqtA (80-603) was successful 
 -  *******************************************************************************
 - building model based on 3bk7A (4-602) was successful 
 - Repository Pipeline parameter

   Cut-off parameters to model the target based on a BLAST target-template alignment
    Evalue :                                     0.0001
    Minimum Template size (aa) for ranking :     25
    Minimum Sequence identity :                  60

   Cut-off parameters to model the target based on a HHSearch target-template alignment
    Evalue :                                     0.0001
    Probability :                                50
    MAC :                                        0.3

   Parameters for model selection
    Minimal number of uncovered target
     residues after BLAST to run HHSEARCH :      50
    Minimal number of uncovered target
     residues to model an additional template :  25
    
 - Finish SMR-Pipeline for:17e51a682d4f83612367e0e6718555f1 on BC2-cluster at Mon Feb 18 15:25:41
2013

Template Search

[ start new template identification in Workspace ]

Template Description

Match

Chain

SeqId

1bd6: 7-FE FERREDOXIN FROM BACILLUS SCHLEGELII, NMR, MINIMIZED AVERAGE STRUCTURE
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	48-73	1bd6A	36%	>target AFISEILCIGC--GICVKKCPFDAIQII------------------------------------------------- >1bd6A AYVITEPCIGTKDASCVEVCPVDCIHEGEDQYYIDPDVCIDCGACEAVCPVSAIYHEDFVPEEWKSYIQKNRDFFKK [Model]
	9-79	1bd6A	27%	>target AIVSADKCKPKKCR-QECKRSCPVVKTGKLCIEVTPTSKIAFISEILCIGCGICVKKCPFDAIQIIN-LPTNL------------- >1bd6A AYVITEPCI--GTKDASCVEVCPVD-----CIHEGE--DQYYIDPDVCIDCGACEAVCPVSAIYHEDFVPEEWKSYIQKNRDFFKK [Model]

1bc6: 7-FE FERREDOXIN FROM BACILLUS SCHLEGELII, NMR, 20 STRUCTUR
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	48-73	1bc6A	36%	>target AFISEILCIGC--GICVKKCPFDAIQII------------------------------------------------- >1bc6A AYVITEPCIGTKDASCVEVCPVDCIHEGEDQYYIDPDVCIDCGACEAVCPVSAIYHEDFVPEEWKSYIQKNRDFFKK [Model]
	9-79	1bc6A	27%	>target AIVSADKCKPKKCR-QECKRSCPVVKTGKLCIEVTPTSKIAFISEILCIGCGICVKKCPFDAIQIIN-LPTNL------------- >1bc6A AYVITEPCI--GTKDASCVEVCPVD-----CIHEGE--DQYYIDPDVCIDCGACEAVCPVSAIYHEDFVPEEWKSYIQKNRDFFKK [Model]

4ad8: CRYSTAL STRUCTURE OF A DELETION MUTANT OF DEINOCOCCUS RADIRECN
Solved by: X-RAY, Resolution: 4.00A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

221-294	4ad8A	20%	>target --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLSGGELQRFAIGM--SCVQEADVYMFDEPSSYLDVKQRLNAAQIIRSLLAPTKYVICVEHDLSVLDYLSDFVCII---------------------------------------------- >4ad8A PRLSRLEIRNLATITQLELELGGGFCAFTGETGAGKSIIVDALGLLLGGRANHDLIRSGEKELLVTGFWDSASRRLSSAGRGAARLSGEVVSVRELQEWAQGRLTIHWQHSAVSLLSPANQRGLLDRRVTKEAQAYAAAHAAWREAVSRLERLQASQRERARQIDLLAFQVQEISEVSPDPGEEEGLNTELSRLSNLHPEALDRVEARLSALSKLKNKYGPTLEDVVEFGAQAAEELAGLEEDERDAGSLQADVDALHAELLKVGQALDAAREREAEPLVDSLLAVIRELGMPHARMEFALSALAEPAAYGLSDVLLRFSANPGEELGPLSDVASGGELSRVMLAVSTVLGADTPSVVFDEVDAGIGGAAAIAVAEQLSRLA-DTRQVLVVTHLAQIAA-RAHHHYKVEKQVEDGRTVSHVRLLTGDERLEEIARMLSGNTSEAALEHARELLA [Model]
465-491	4ad8A	14%	>target --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VQHLSGGELQRVA-IVLALGIPADIYLI-------------------------------------------------------------- >4ad8A PRLSRLEIRNLATITQLELELGGGFCAFTGETGAGKSIIVDALGLLLGGRANHDLIRSGEKELLVTGFWDSASRRLSSAGRGAARLSGEVVSVRELQEWAQGRLTIHWQHSAVSLLSPANQRGLLDRRVTKEAQAYAAAHAAWREAVSRLERLQASQRERARQIDLLAFQVQEISEVSPDPGEEEGLNTELSRLSNLHPEALDRVEARLSALSKLKNKYGPTLEDVVEFGAQAAEELAGLEEDERDAGSLQADVDALHAELLKVGQALDAAREREAEPLVDSLLAVIRELGMPHARMEFALSALAEPAAYGLSDVLLRFSANPGEELGPLSDVASGGELSRVMLAVSTVLGADTPSVVFDEVDAGIGGAAAIAVAEQLSRLADTRQVLVVTHLAQIAARAHHHYKVEKQVEDGRTVSHVRLLTGDERLEEIARMLSGNTSEAALEHARELLA [Model]
467-541	4ad8A	23%	>target --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HLSGGELQRVAIVL--ALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEHDFIMATYLADKVIVF---------------------------------------------- >4ad8A PRLSRLEIRNLATITQLELELGGGFCAFTGETGAGKSIIVDALGLLLGGRANHDLIRSGEKELLVTGFWDSASRRLSSAGRGAARLSGEVVSVRELQEWAQGRLTIHWQHSAVSLLSPANQRGLLDRRVTKEAQAYAAAHAAWREAVSRLERLQASQRERARQIDLLAFQVQEISEVSPDPGEEEGLNTELSRLSNLHPEALDRVEARLSALSKLKNKYGPTLEDVVEFGAQAAEELAGLEEDERDAGSLQADVDALHAELLKVGQALDAAREREAEPLVDSLLAVIRELGMPHARMEFALSALAEPAAYGLSDVLLRFSANPGEELGPLSDVASGGELSRVMLAVSTVLGADTPSVVFDEVDAGIGGAAAIAVAEQLSRLAD--TRQVLVVTHLAQIAA-RAHHHYKVEKQVEDGRTVSHVRLLTGDERLEEIARMLSGNTSEAALEHARELLA [Model]
100-124	4ad8A	28%	>target --------------------PRPGQVLGLVGTNGIGKSTALKILA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ >4ad8A PRLSRLEIRNLATITQLELELGGG-FCAFTGETGAGKSIIVDALGLLLGGRANHDLIRSGEKELLVTGFWDSASRRLSSAGRGAARLSGEVVSVRELQEWAQGRLTIHWQHSAVSLLSPANQRGLLDRRVTKEAQAYAAAHAAWREAVSRLERLQASQRERARQIDLLAFQVQEISEVSPDPGEEEGLNTELSRLSNLHPEALDRVEARLSALSKLKNKYGPTLEDVVEFGAQAAEELAGLEEDERDAGSLQADVDALHAELLKVGQALDAAREREAEPLVDSLLAVIRELGMPHARMEFALSALAEPAAYGLSDVLLRFSANPGEELGPLSDVASGGELSRVMLAVSTVLGADTPSVVFDEVDAGIGGAAAIAVAEQLSRLADTRQVLVVTHLAQIAARAHHHYKVEKQVEDGRTVSHVRLLTGDERLEEIARMLSGNTSEAALEHARELLA [Model]

1bwe: ARTIFICIAL FE8S8 FERREDOXIN: THE D13C VARIANT OF BACILLUS SCHLEGELII FE7S8 FERREDOXIN
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	49-74	1bweA	27%	>target ---FISEILCIGCGICVKKCPFDAIQIIN------------------------------------------------ >1bweA AYVITEPCIGTKCASCVEVCPVDCIHEGEDQYYIDPDVCIDCGACEAVCPVSAIYHEDFVPEEWKSYIQKNRDFFKK [Model]
	9-76	1bweA	29%	>target AIVSADKCKPKKCRQECKRSCPVVKTGKLCIEVTPTSKIAFISEILCIGCGICVKKCPFDAIQIINLP----------------- >1bweA AYVITEPCIGTKC-ASCVEVCPVDC-----IH--EGEDQYYIDPDVCIDCGACEAVCPVSAIYHEDFVPEEWKSYIQKNRDFFKK [Model]

1bqx: ARTIFICIAL FE8S8 FERREDOXIN: THE D13C VARIANT OF BACILLUS SCHLEGELII FE7S8 FERREDOXIN
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	49-74	1bqxA	27%	>target ---FISEILCIGCGICVKKCPFDAIQIIN------------------------------------------------ >1bqxA AYVITEPCIGTKCASCVEVCPVDCIHEGEDQYYIDPDVCIDCGACEAVCPVSAIYHEDFVPEEWKSYIQKNRDFFKK [Model]
	9-76	1bqxA	29%	>target AIVSADKCKPKKCRQECKRSCPVVKTGKLCIEVTPTSKIAFISEILCIGCGICVKKCPFDAIQIINLP----------------- >1bqxA AYVITEPCIGTKC-ASCVEVCPVDC-----IH--EGEDQYYIDPDVCIDCGACEAVCPVSAIYHEDFVPEEWKSYIQKNRDFFKK [Model]

4g1u: X-RAY STRUCTURE OF THE BACTERIAL HEME TRANSPORTER HMUUV FRPESTIS
Solved by: X-RAY, Resolution: 3.01A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

353-583	4g1uC	20%	>target ------AFSYPSLKKTQGDFV-LNVEEGEFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIPK-------------LNVSMKPQKIAPKFPGTVRQLFFKKIRG--QFLNPQFQTDVVKPLRIDDIIDQEVQHLSGGELQRVAIVLALGI------PADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEHDFIMATYLADKVIVF-EGIPSKNAHARAPESLLTG--CNRFLKNLNVTFRRDPNSFRPRI---- >4g1uC AVTPVALLEASHLHYHVQQQALINDVSLHIASGEMVAIIGPNGAGKSTLLRLLTGYLSPSHGECHLLGQNLNSWQPKALARTRAVMRQYSELAFPFSVSEVIQMGRAPYGGSQDRQALQQVMAQTDCLALAQRDYRVLSGGEQQRVQLARVLAQLWQPQPTPRWLFLDEPTSALDLYHQQHTLRLLRQLTRQEPLAVCCVLHDLNLAALYADRIMLLAQGKLVA---CGTPEEVLNAETLTQWY-QADLGVSRHPESALPQIYLRQ [Model]
354-583	4g1uD	21%	>target --FSYPSLKKTQGDFV-LNVEEGEFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIPK-------------LNVSMKPQKIAPKFPGTVRQLFFKKIR--GQFLNPQFQTDVVKPLRIDDIIDQEVQHLSGGELQRVAIVLALGI------PADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEHDFIMATYLADKVIVF-EGIPSKNAHARAPESLLTG--CNRFLKNLNVTFRRDPNSFRPRI---- >4g1uD ALLEASHLHYHVQQQALINDVSLHIASGEMVAIIGPNGAGKSTLLRLLTGYLSPSHGECHLLGQNLNSWQPKALARTRAVMRQYSELAFPFSVSEVIQMGRAPYGGSQDRQALQQVMAQTDCLALAQRDYRVLSGGEQQRVQLARVLAQLWQPQPTPRWLFLDEPTSALDLYHQQHTLRLLRQLTRQEPLAVCCVLHDLNLAALYADRIMLLAQGKLV---ACGTPEEVLNAETLTQWY-QADLGVSRHPESALPQIYLRQ [Model]
66-297	4g1uC	20%	>target ---PFDAIQIINLPTNLEAHVTHRYSANSFKLHRLP-TPRPGQVLGLVGTNGIGKSTALKILAGKQKPNLGRFDDPPEWQEIIKYFRGSELQNYFTKMLEDDIKAIIKPQYVDNIPRAIKGPVQKVGEL--LKLRMEKSPEDVKRYIKILQLENVLKRDIEKLSGGELQRFAIGMSCVQ------EADVYMFDEPSSYLDVKQRLNAAQIIRSLLA-PTKYVICVEHDLSVLDYLSDFVCIIY-GV----------------------------------------- >4g1uC AVTPVALLEASHL--------HYHVQQQA-LINDVSLHIASGEMVAIIGPNGAGKSTLLRLLTGYLSPSHGECH-----------LLGQNLNSWQPKALAR--TRAVMRQYSELAFP---FSVSEVIQMGRAPYGGSQDRQALQQVMAQTDCLALAQRDYRVLSGGEQQRVQLARVLAQLWQPQPTPRWLFLDEPTSALDLYHQQHTLRLLRQLTRQEPLAVCCVLHDLNLAALYADRIMLLAQGKLVACGTPEEVLNAETLTQWYQADLGVSRHPESALPQIYLRQ [Model]
83-296	4g1uD	21%	>target -------VTHRYSANSFKLHRLP-TPRPGQVLGLVGTNGIGKSTALKILAGKQKPNLGRFDDPPEWQEIIKYFRGSELQNYFTKMLEDDIKAIIKPQYVDNIPR-AIKGPVQKVGELLKLRMEKSPEDVKRYIKILQLENVLKRDIEKLSGGELQRFAIGMSCVQ------EADVYMFDEPSSYLDVKQRLNAAQIIRSLLA-PTKYVICVEHDLSVLDYLSDFVCIIYG------------------------------------------- >4g1uD ALLEASHLHYHVQQQ-ALINDVSLHIASGEMVAIIGPNGAGKSTLLRLLTGYLSPSHGECH-----------LLGQNLNSWQPKALAR--TRAVMRQYSELAFPFSVSEVIQM-GRA-PYGGSQDRQALQQVMAQTDCLALAQRDYRVLSGGEQQRVQLARVLAQLWQPQPTPRWLFLDEPTSALDLYHQQHTLRLLRQLTRQEPLAVCCVLHDLNLAALYADRIMLLAQGKLVACGTPEEVLNAETLTQWYQADLGVSRHPESALPQIYLRQ [Model]

4aby: CRYSTAL STRUCTURE OF DEINOCOCCUS RADIODURANS RECN HEAD DOMAIN
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

220-292	4abyA	21%	>target ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKLSGGELQRFAIGMSC--VQEADVYMFDEPSSYLDVKQRLNAAQIIRSLLAPTKYVICVEHDLSVLDYLSDFVC------------------------------------------------ >4abyA PRLSRLEIRNLATITQLELELGGGFCAFTGETGAGKSIIVDALGLLLGGRANHDLIRSGEKELLVTGFWDSASRRLSSAGRGAARLSGEVVSVRELQEWAQGRLTIHWQHSAVSLLSPANQRGLLDRRVTKEAQAYAAAHAAWREAVSRLERLLVPRGSVDALHAELLKVGQALDAAREREAEPLVDSLLAVIRELGMPHARMEFALSALAEPAAYGLSDVLLRFSANPGEELGPLSDVASGGELSRVMLAVSTVLGADTPSVVFDEVDAGIGGAAAIAVAEQLSRLA-DTRQVLVVTHLAQIA-ARAHHHYKVEKQVEDGRTVSHVRLLTGDERLEEIARMLSGNTSEAALEHARELLA [Model]
467-541	4abyA	23%	>target ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HLSGGELQRVAIVLA--LGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEHDFIMATYLADKVIVF---------------------------------------------- >4abyA PRLSRLEIRNLATITQLELELGGGFCAFTGETGAGKSIIVDALGLLLGGRANHDLIRSGEKELLVTGFWDSASRRLSSAGRGAARLSGEVVSVRELQEWAQGRLTIHWQHSAVSLLSPANQRGLLDRRVTKEAQAYAAAHAAWREAVSRLERLLVPRGSVDALHAELLKVGQALDAAREREAEPLVDSLLAVIRELGMPHARMEFALSALAEPAAYGLSDVLLRFSANPGEELGPLSDVASGGELSRVMLAVSTVLGADTPSVVFDEVDAGIGGAAAIAVAEQLSRLAD--TRQVLVVTHLAQIA-ARAHHHYKVEKQVEDGRTVSHVRLLTGDERLEEIARMLSGNTSEAALEHARELLA [Model]
221-293	4abyB	21%	>target ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KLSGGELQRFAIGMS--CVQEADVYMFDEPSSYLDVKQRLNAAQIIRSLLAPTKYVICVEHDLSVLDYLSDFVCI--------------------------------------------- >4abyB PRLSRLEIRNLATITQLELELGGGFCAFTGETGAGKSIIVDALGLLLGGRANHDLIRSGEKELLVTGFWADSASRRLSSAGRGAARLSGEVVSVRELQEWAQGRLTIHWQHSAVSLLSPANQRGLLDRRVTKEAQAYAAAHAAWREAVSRLERLQATSLVPRGSVDALHAELLKVGQALDAAREREAEPLVDSLLAVIRELGMPHARMEFALSALAEPAAYGLSDVLLRFSANPGEELGPLSDVASGGELSRVMLAVSTVLGADTPSVVFDEVDAGIGGAAAIAVAEQLSRLA-DTRQVLVVTHLAQIA-ARAHHHYKVEKQVEDGRTVSHVRLLTGDERLEEIARMLSGNEAALEHARELLA [Model]
467-540	4abyB	24%	>target ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HLSGGELQRVAIVLA--LGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEHDFIMATYLADKVIV--------------------------------------------- >4abyB PRLSRLEIRNLATITQLELELGGGFCAFTGETGAGKSIIVDALGLLLGGRANHDLIRSGEKELLVTGFWADSASRRLSSAGRGAARLSGEVVSVRELQEWAQGRLTIHWQHSAVSLLSPANQRGLLDRRVTKEAQAYAAAHAAWREAVSRLERLQATSLVPRGSVDALHAELLKVGQALDAAREREAEPLVDSLLAVIRELGMPHARMEFALSALAEPAAYGLSDVLLRFSANPGEELGPLSDVASGGELSRVMLAVSTVLGADTPSVVFDEVDAGIGGAAAIAVAEQLSRLA--DTRQVLVVTHLAQIA-ARAHHHYKVEKQVEDGRTVSHVRLLTGDERLEEIARMLSGNEAALEHARELLA [Model]
220-294	4abyC	21%	>target ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKLSGGELQRFAIGMS--CVQEADVYMFDEPSSYLDVKQRLNAAQIIRSLLAPTKYVICVEHDLSVLDYLSDFVCII------------------------------------------ >4abyC PRLSRLEIRNLATITQLELELGGGFCAFTGETGAGKSIIVDALGLLLGGRANHDLIRSGEKELLVTGFWGDESEDSASRRLSSAGRGAARLSGEVVSVRELQEWAQGRLTIHWQHSAVSLLSPANQRGLLDRRVTKEAQAYAAAHAAWREAVSRLEGSVDALHAELLKVGQALDAAREREAEPLVDSLLAVIRELGMPHARMEFALSALAEPAAYGLSDVLLRFSANPELGPLSDVASGGELSRVMLAVSTVLGADTPSVVFDEVDAGIGGAAAIAVAEQLSRLA-DTRQVLVVTHLAQIAA-RAHHHYKVEKQVTVSHVRLLTGDERLEEIARMLSGNTSEAALEHARELLA [Model]
467-542	4abyC	24%	>target -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HLSGGELQRVAIVL--ALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEHDFIMATYLADKVIVFE----------------------------------------- >4abyC PRLSRLEIRNLATITQLELELGGGFCAFTGETGAGKSIIVDALGLLLGGRANHDLIRSGEKELLVTGFWGDESEDSASRRLSSAGRGAARLSGEVVSVRELQEWAQGRLTIHWQHSAVSLLSPANQRGLLDRRVTKEAQAYAAAHAAWREAVSRLEGSVDALHAELLKVGQALDAAREREAEPLVDSLLAVIRELGMPHARMEFALSALAEPAAYGLSDVLLRFSANPELGPLSDVASGGELSRVMLAVSTVLGADTPSVVFDEVDAGIGGAAAIAVAEQLSRLAD--TRQVLVVTHLAQIAA-RAHHHYKVEKQVTVSHVRLLTGDERLEEIARMLSGNTSEAALEHARELLA [Model]
220-296	4abyD	19%	>target -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EKLSGGELQRFAIG--MSCVQEADVYMFDEPSSYLDVKQRLNAAQIIRSLLAPTKYVICVEHDLSVLDYLSDFVCIIYG---------------------------------- >4abyD PRLSRLEIRNLATITQLELELGGGFCAFTGETGAGKSIIVDALGLLLGGRANHDLIRELLVTGFWGADSASRRLSSAGRGAARLSGEVVSVRELQEWAQGRLTIHWQHSAVRGLLDRRVTKEAQAYAAAHAARGSVDALHAELLKVGQALDAAREREAEPLVDSLLAVIRELGMPHARMEFADVLLRFSANPEELGPLSDVASGGELSRVMLAVSTVLGADTPSVVFDEVDAGIGGAAAIAVAEQLSRLAD-TRQVLVVTHLAQIAARAHHHYKVEKQVETVSHVRLLTGDERLEEIARMLSSEAALEHARE [Model]
466-541	4abyD	24%	>target -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QHLSGGELQRVAIVLA--LGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEHDFIMATYLADKV-IVF------------------------------------ >4abyD PRLSRLEIRNLATITQLELELGGGFCAFTGETGAGKSIIVDALGLLLGGRANHDLIRELLVTGFWGADSASRRLSSAGRGAARLSGEVVSVRELQEWAQGRLTIHWQHSAVRGLLDRRVTKEAQAYAAAHAARGSVDALHAELLKVGQALDAAREREAEPLVDSLLAVIRELGMPHARMEFADVLLRFSANPEELGPLSDVASGGELSRVMLAVSTVLGADTPSVVFDEVDAGIGGAAAIAVAEQLSRLAD--TRQVLVVTHLAQIAAR-AHHHYKVEKQVETVSHVRLLTGDERLEEIARMLSSEAALEHARE [Model]

4esv: A NEW TWIST ON THE TRANSLOCATION MECHANISM OF HELICASES FRSTRUCTURE OF DNAB WITH ITS SUBSTRATES
Solved by: X-RAY, Resolution: 3.20A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

373-526	4esvF	12%	>target ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GEFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIPKLNVSMKPQKIAPKFPGTVRQLFFKKI-----------RGQFLNPQFQTDV---VKPLRIDDIIDQEVQHLSGGELQRVAIVLALGIPADIYLIDE-----PS-A-YLDSEQ-RIICSKVIRRFILHNKKTAFIVEH------------------------------------------------------------------------------- >4esvF IPPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEVSAFKNIKDILVQTYDNIEMLITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTN-----ENVAIFS------LEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVSDIRAKCRRLKQESGLGMIVIDYLQLIQGSGRSKENRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDKRPMMSDIRESGSIEQDADIVAFLYRDDYYNKDSENKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]
374-526	4esvA	11%	>target -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIPKLNVSMKPQKIAPKFPGTVRQLFFKKI-----------RGQFLNPQFQ---TDVVKPLRIDDIIDQEVQHLSGGELQRVAIVLALGIPADIYLIDEPSAYLD---------SEQRIICSKVIRRFILHNKKTAFIVEH------------------------------------------------------------------------------- >4esvA SERIPPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEVSQFKNIKDILVQTYITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTN-----ENVAIFS------LEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVSDIRAKCRRLKQESGLGMIVIDYL-QLIQGSGRSKENRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDKRPMMSDIRESGSIEQDADIVAFLYRDDYYNKDSENKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]
373-526	4esvC	10%	>target ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GEFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIPKLNVSMKPQKIAPKFPGTVRQLFFKKIRG-----------QFLNPQFQTDVV---KPLRIDDIIDQEVQHLSGGELQRVAIVLALGIPADIYLIDEPS------AYL-DSE-QRIICSKVIRRFILHNKKTAFIVEH------------------------------------------------------------------------------- >4esvC RIPPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEVSQRKHSGAFKNIKDILVQTYDNIEMLHNRDGEITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTN-----ENVAIFS------LEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVSDIRAKCRRLKQESGLGMIVIDYLQLIQGSGRSKENRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDKRPMMSDIRESGSIEQDADIVAFLYRDDYYNKDSENKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]
373-526	4esvE	11%	>target ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GEFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIPKLNVSMKPQKIAPKFPGTVRQLFFKKIRGQ-----------FLNPQFQT---DVVKPLRIDDIIDQEVQHLSGGELQRVAIVLALGIPADIYLIDEPS------A-YLDSEQ-RIICSKVIRRFILHNKKTAFIVEH------------------------------------------------------------------------------- >4esvE SIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEGAFKNIKDILVQTYDNIEMLHNITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTN-----ENVAIFS------LEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVSDIRAKCRRLKQESGLGMIVIDYLQLIQGSGRSKENRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDKRPMMSDIRESGSIEQDADIVAFLYRDDYYNKDSENKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]
373-526	4esvD	11%	>target -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GEFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIPKLNVSMKPQKIAPKFPGTVRQLFFKKI-----------RGQ-FLNPQF--QTDVVKPLRIDDIIDQEVQHLSGGELQRVAIVLALGIPADIYLIDE-----PSA-Y-LDSE-QRIICSKVIRRFILHNKKTAFIVEH------------------------------------------------------------------------------- >4esvD RIPPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEVSQRKHAFKNIKDILVQTYDNIEMLHNRDGITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTN-----ENVAIFS------LEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVSDIRAKCRRLKQESGLGMIVIDYLQLIQGSGRSKENRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDKRPMMSDIRESGSIEQDADIVAFLYRDDYYNKDSENKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]
373-542	4esvB	11%	>target ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GEFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIPKLNVSMKPQKIAPKFPGTVRQLFFKKIR-----------GQFLNPQFQTDVV---KPLRIDDIIDQEVQHLSGGELQRVAIVLALGIPADIYLIDEPS------A-YLDS-EQRIICSKVIRRFILHNKKTAFIVEH--------DF---IMATYLADKVIVFE------------------------------------------------ >4esvB SERIPPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEVSQRKHSGAFKNIKDILVQTYDNIEMLHNGEITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTN-----ENVAIFS------LEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVSDIRAKCRRLKQESGLGMIVIDYLQLIQGSGRSKENRQQEVSEISRSLKALARELEVPVIALSQLSRRPMMSDIRESGSIEQDADIVAFLYRDDYYNKDSENKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNLERRF [Model]
467-526	4esvC	13%	>target -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HLSGGELQRVAIVLALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEH------------------------------------------------------------------------------------------------------------------------ >4esvC RIPPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEVSQRKHSGAFKNIKDILVQTYDNIEMLHNRDGEITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTP--SIRVSD---IRAKCRRLKQESGLGMIVIDYLQLIQGSGRSKENRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDKRPMMSDIRESGSIEQDADIVAFLYRDDYYNKDSENKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]
467-526	4esvB	13%	>target -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HLSGGELQRVAIVLALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEH-------------------------------------------------------------------------------------------------------------------- >4esvB SERIPPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEVSQRKHSGAFKNIKDILVQTYDNIEMLHNGEITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTP--SIRVSD---IRAKCRRLKQESGLGMIVIDYLQLIQGSGRSKENRQQEVSEISRSLKALARELEVPVIALSQLSRRPMMSDIRESGSIEQDADIVAFLYRDDYYNKDSENKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNLERRF [Model]
467-526	4esvE	13%	>target ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HLSGGELQRVAIVLALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEH------------------------------------------------------------------------------------------------------------------------ >4esvE SIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEGAFKNIKDILVQTYDNIEMLHNITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTP--SIRVSD---IRAKCRRLKQESGLGMIVIDYLQLIQGSGRSKENRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDKRPMMSDIRESGSIEQDADIVAFLYRDDYYNKDSENKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]
466-526	4esvA	15%	>target --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QHLSGGELQRVAIVLALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEH------------------------------------------------------------------------------------------------------------------------ >4esvA SERIPPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEVSQFKNIKDILVQTYITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPS--IRVS---DIRAKCRRLKQESGLGMIVIDYLQLIQGSGRSKENRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDKRPMMSDIRESGSIEQDADIVAFLYRDDYYNKDSENKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]
467-526	4esvD	15%	>target ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HLSGGELQRVAIVLALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEH------------------------------------------------------------------------------------------------------------------------ >4esvD RIPPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEVSQRKHAFKNIKDILVQTYDNIEMLHNRDGITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPS--IRVSD---IRAKCRRLKQESGLGMIVIDYLQLIQGSGRSKENRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDKRPMMSDIRESGSIEQDADIVAFLYRDDYYNKDSENKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]
373-526	4esvL	11%	>target -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GEFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIPKLNVSMKPQKIAPKFPGTVRQLFFKKIR-----------GQFLNPQFQTDV---VKPLRIDDIIDQEVQHLSGGELQRVAIVLALGIPADIYLIDE-----P-SA-YLDSEQ-RIICSKVIRRFILHNKKTAFIVEH------------------------------------------------------------------------------- >4esvL PPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEVAFKNIKDILVQTYDNIEMLITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTN-----ENVAIFS------LEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVSDIRAKCRRLKQESGLGMIVIDYLQLIQGSGRSKENRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDKRPMMSDIRESGSIEQDADIVAFLYRDDYYNKDSENKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]
373-526	4esvH	11%	>target ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GEFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIPKLNVSMKPQKIAPKFPGTVRQLFFKKIR-----------G-QFLNPQF--QTDVVKPLRIDDIIDQEVQHLSGGELQRVAIVLALGIPADIYLIDE-----PS-AYL-DSEQ-RIICSKVIRRFILHNKKTAFIVEH----------------------------------------------------------------------------------- >4esvH IPPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEFKNIKDILVQTYDNIEMLHNRITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTN-----ENVAIFS------LEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVSDIRAKCRRLKQESGLGMIVIDYLQLIQGSGRSKENRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDKRPMMSDIRESGSIEQDADIVAFLYRDDYYNKDSENKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNLERRF [Model]
373-526	4esvG	11%	>target ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GEFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIPKLNVSMKPQKIAPKFPGTVRQLFFKKIR-----------GQFLNPQFQTDV---VKPLRIDDIIDQEVQHLSGGELQRVAIVLALGIPADIYLIDEPS------A-YLDSEQ-RIICSKVIRRFILHNKKTAFIVEH------------------------------------------------------------------------------- >4esvG RIPPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEVSFKNIKDILVQTYDNIEMLITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTN-----ENVAIFS------LEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVSDIRAKCRRLKQESGLGMIVIDYLQLIQGSGRSKENRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDKRPMMSDIRESGSIEQDADIVAFLYRDDYYNKDSENKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]
373-526	4esvK	11%	>target ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GEFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIPKLNVSMKPQKIAPKFPGTVRQLFFKKIR-----------GQFLNPQFQTDV---VKPLRIDDIIDQEVQHLSGGELQRVAIVLALGIPADIYLIDEPS------A-YLDSEQR-IICSKVIRRFILHNKKTAFIVEH------------------------------------------------------------------------------- >4esvK RIPPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEGAFKNIKDILVQTYDNIEMLITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTN-----ENVAIFS------LEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVSDIRAKCRRLKQESGLGMIVIDYLQLIQGSGRSKENRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDKRPMMSDIRESGSIEQDADIVAFLYRDDYYNKDSENKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]
374-526	4esvI	12%	>target -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIPKLNVSMKPQKIAPKFPGTVRQLFFKKI-----------RGQFLNPQFQTDV---VKPLRIDDIIDQEVQHLSGGELQRVAIVLALGIPADIYLIDE-----PS--AYLDSEQ-RIICSKVIRRFILHNKKTAFIVEH------------------------------------------------------------------------------- >4esvI IPPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEFKNIKDILVQTYDNIEMLITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTN-----ENVAIFS------LEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVSDIRAKCRRLKQESGLGMIVIDYLQLIQGSGRSKENRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDKRPMMSDIRESGSIEQDADIVAFLYRDDYYNKDSENKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]
374-526	4esvJ	11%	>target -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------EFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIPKLNVSMKPQKIAPKFPGTVRQLFFKKI-----------RGQFLNPQFQTDV---VKPLRIDDIIDQEVQHLSGGELQRVAIVLALGIPADIYLIDEPS------AY-LDSEQ-RIICSKVIRRFILHNKKTAFIVEH------------------------------------------------------------------------------- >4esvJ IEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEVSQFKNIKDILVQTYDNIEMLITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTN-----ENVAIFS------LEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVSDIRAKCRRLKQESGLGMIVIDYLQLIQGSGRSKENRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDKRPMMSDIRESGSIEQDADIVAFLYRDDYYNKDSENKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]
468-526	4esvG	15%	>target -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSGGELQRVAIVLALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEH------------------------------------------------------------------------------------------------------------------------ >4esvG RIPPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEVSFKNIKDILVQTYDNIEMLITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPS--IRVSD---IRAKCRRLKQESGLGMIVIDYLQLIQGSGRSKENRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDKRPMMSDIRESGSIEQDADIVAFLYRDDYYNKDSENKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]
468-526	4esvK	15%	>target -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LSGGELQRVAIVLALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEH------------------------------------------------------------------------------------------------------------------------ >4esvK RIPPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEGAFKNIKDILVQTYDNIEMLITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPS--IRVS---DIRAKCRRLKQESGLGMIVIDYLQLIQGSGRSKENRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDKRPMMSDIRESGSIEQDADIVAFLYRDDYYNKDSENKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]
467-526	4esvH	15%	>target ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HLSGGELQRVAIVLALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEH---------------------------------------------------------------------------------------------------------------------------- >4esvH IPPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEFKNIKDILVQTYDNIEMLHNRITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPS--IRVS---DIRAKCRRLKQESGLGMIVIDYLQLIQGSGRSKENRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDKRPMMSDIRESGSIEQDADIVAFLYRDDYYNKDSENKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNLERRF [Model]
102-121	4esvI	10%	>target ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PGQVLGLVGTNGIGKSTALK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >4esvI IPPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEFKNIKDILVQTYDNIEMLITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVSDIRAKCRRLKQESGLGMIVIDYLQLIQGSGRSKENRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDKRPMMSDIRESGSIEQDADIVAFLYRDDYYNKDSENKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]
101-123	4esvF	9%	>target ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RPGQVLGLVGTNGIGKSTALKIL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >4esvF IPPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEVSAFKNIKDILVQTYDNIEMLITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVSDIRAKCRRLKQESGLGMIVIDYLQLIQGSGRSKENRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDKRPMMSDIRESGSIEQDADIVAFLYRDDYYNKDSENKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]
102-121	4esvL	10%	>target -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PGQVLGLVGTNGIGKSTALK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- >4esvL PPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEVAFKNIKDILVQTYDNIEMLITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVSDIRAKCRRLKQESGLGMIVIDYLQLIQGSGRSKENRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDKRPMMSDIRESGSIEQDADIVAFLYRDDYYNKDSENKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]
510-526	4esvJ	12%	>target ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IRRFILHNKKTAFIVEH------------------------------------------------------------------------------------------------------------------------ >4esvJ IEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEVSQFKNIKDILVQTYDNIEMLITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVSDIRAKCRRLKQESGLGMIVIDYLQLIQGSGRSKENRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDKRPMMSDIRESGSIEQDADIVAFLYRDDYYNKDSENKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]

2r6a: CRYSTAL FORM BH1
Solved by: X-RAY, Resolution: 2.90A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

374-527	2r6aB	12%	>target --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIPKLNVSMKPQKIAPKFPGTVRQLFFKKIRGQFLNPQFQTDVVKPLRIDDIIDQEVQHLSGGELQRVAIVLALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEHD-------------------------------------------------------------------- >2r6aB IPPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEVSQRKHSGAFKNIKDILVQTYDNIEITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTN-----ENVAIF----S--LEMSAQQLVMRMLCAEGN-----------INAQNLRT---GKLTPEDWGKLTMAMGSLSNAGIYIDDTPS--IRVSD---IRAKCRRLKQESGLGMIVIDYLQLIEVSEISRSLKALARELEVPVIALSQLDADIVAFLIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]
373-542	2r6aA	10%	>target ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GEFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIPKLNVSMKPQKIAPKFPGTVRQLFFKKI-----------RG-QFLNPQF--QTDVVKPLRIDDIIDQEVQHLSGGELQRVAIVLALGIPADIYLIDEPSAYL-----DSEQRIICSKVIRRFILHNKKTAFIVEHD-------------F---IMATYLADKVIVFE------------------------------------- >2r6aA RIPPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEVSQRKHSGAFKNIKDILVQTYDNIEMLHNRDGEITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTN-----ENVAIF----S--LEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVSDIRAKCRRLKQESGLGMIVIDYL-QLIQGSGRRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRRPMMSDIRESGSIEQDADIVAFLYRDDYKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]
466-526	2r6aA	13%	>target ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QHLSGGELQRVAIVLALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEH---------------------------------------------------------------------------------------------------------- >2r6aA RIPPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEVSQRKHSGAFKNIKDILVQTYDNIEMLHNRDGEITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTP--SIRVSD---IRAKCRRLKQESGLGMIVIDYLQLIQGSGRRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRRPMMSDIRESGSIEQDADIVAFLYRDDYKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]
484-541	2r6aB	14%	>target -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEHDFIMATYLADKVIVF------------------------------- >2r6aB IPPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEVSQRKHSGAFKNIKDILVQTYDNIEITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVSDIRAKCRRLKQESGLGMIVID----YLQLIEVSEISRSLKALARELEVPVIALSQL------DADIVAFLIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]

2r6d: CRYSTAL FORM B1
Solved by: X-RAY, Resolution: 3.70A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

373-526	2r6dF	11%	>target ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GEFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIPKLNVSMKPQKIAPKFPGTVRQLFFKKIR-----------GQFLNPQFQTDV---VKPLRIDDIIDQEVQHLSGGELQRVAIVLALGIPADIYLIDEPSAYLDSE--QRIICSKVIRRFILHNKKTAFIVEH--------------------------------------------------------------- >2r6dF PPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEKNIKDILVQTYDNIEEITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTN-----ENVAIFS------LEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVSDIRAKCRRLKQESGLGMIVIDYLQ-LIQGSGREVSEISRSLKALARELEVPVIALSQLSRSVERPMMSDIRESGSIEQDADIVAFLYKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]
373-526	2r6dE	11%	>target ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GEFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIPKLNVSMKPQKIAPKFPGTVRQLFFKKIR-----------GQFLNPQFQTDV---VKPLRIDDIIDQEVQHLSGGELQRVAIVLALGIPADIYLIDEPSAYLDSE--QRIICSKVIRRFILHNKKTAFIVEH--------------------------------------------------------------- >2r6dE PPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEKNIKDILVQTYDNIEEITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTN-----ENVAIFS------LEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVSDIRAKCRRLKQESGLGMIVIDYLQ-LIQGSGREVSEISRSLKALARELEVPVIALSQLSRSVERPMMSDIRESGSIEQDADIVAFLYKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]
373-542	2r6dC	11%	>target ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GEFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIPKLNVSMKPQKIAPKFPGTVRQLFFKKIR-----------GQFLNPQFQTDV---VKPLRIDDIIDQEVQHLSGGELQRVAIVLALGIPADIYLIDEPSAYLDSE--QRIICSKVIRRFILHNKKTAFIVEHD-----------F---IMATYLADKVIVFE--------------------------------- >2r6dC PPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEKNIKDILVQTYDNIEMLHNRDGEITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTN-----ENVAIFS------LEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVSDIRAKCRRLKQESGLGMIVIDYLQ-LIQGSGREVSEISRSLKALARELEVPVIALSQLSRSVERPMMSDIRESGSIEQDADIVAFLYKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]
374-542	2r6dA	11%	>target -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIPKLNVSMKPQKIAPKFPGTVRQLFFKKI-----------RGQFLNPQFQTDV---VKPLRIDDIIDQEVQHLSGGELQRVAIVLALGIPADIYLIDEPSAYLDSE--QRIICSKVIRRFILHNKKTAFIVEHD-----------F---IMATYLADKVIVFE--------------------------------- >2r6dA PPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEVSQRAFKNIKDILVQTYDNIEMLHNRDGEITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTN-----ENVAIFS------LEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVSDIRAKCRRLKQESGLGMIVIDYLQ-LIQGSGREVSEISRSLKALARELEVPVIALSQLSRSVERPMMSDIRESGSIEQDADIVAFLYKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]
466-526	2r6dC	13%	>target ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QHLSGGELQRVAIVLALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEH------------------------------------------------------------------------------------------------- >2r6dC PPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEKNIKDILVQTYDNIEMLHNRDGEITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTP--SIRVSD---IRAKCRRLKQESGLGMIVIDYLQLIQGSGREVSEISRSLKALARELEVPVIALSQLSRSVERPMMSDIRESGSIEQDADIVAFLYKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]
466-526	2r6dA	13%	>target ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QHLSGGELQRVAIVLALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEH------------------------------------------------------------------------------------------------- >2r6dA PPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEVSQRAFKNIKDILVQTYDNIEMLHNRDGEITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTP--SIRVSD---IRAKCRRLKQESGLGMIVIDYLQLIQGSGREVSEISRSLKALARELEVPVIALSQLSRSVERPMMSDIRESGSIEQDADIVAFLYKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]
466-526	2r6dF	13%	>target -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QHLSGGELQRVAIVLALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEH------------------------------------------------------------------------------------------------- >2r6dF PPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEKNIKDILVQTYDNIEEITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTP--SIRVS---DIRAKCRRLKQESGLGMIVIDYLQLIQGSGREVSEISRSLKALARELEVPVIALSQLSRSVERPMMSDIRESGSIEQDADIVAFLYKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]
466-526	2r6dE	13%	>target -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QHLSGGELQRVAIVLALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEH------------------------------------------------------------------------------------------------- >2r6dE PPQSIEAEQAVLGAVFLDPAALVPASEILIPEDFYRAAHQKIFHAMLRVADRGEPVDLVTVTAELAASEQLEEIGGVSYLSELADAVPTAANVEYYARIVEEKSVLRRLIRTATSIAQDGYTREDEIDVLLDEADRKIMEKNIKDILVQTYDNIEEITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTP--SIRVS---DIRAKCRRLKQESGLGMIVIDYLQLIQGSGREVSEISRSLKALARELEVPVIALSQLSRSVERPMMSDIRESGSIEQDADIVAFLYKNIIEIIIAKQRNGPVGTVQLAFIKEYNKFVNL [Model]

2vyf: CRYSTAL STRUCTURE OF THE DNAC
Solved by: X-RAY, Resolution: 3.60A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

373-542	2vyfA	11%	>target ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GEFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIPKLNVSMKPQKIAPKFPGTVRQLFFKKIRG----QFLNPQFQTDV---VKPLRIDDIIDQEVQHLSGGELQRVAIVLALGIPADIYLIDEPS------AYLD-S-EQRIICSKVIRRFILHNKKTAFIVEH--DFIMATYLADKVIVFE---------------------------- >2vyfA RIPPQSIEAEQAVLGAVFLDPTALTLASERLIPEDFYRAAHQKIFHAMLRVADKGEPVDLVTVTAELAALEQLEEVGGVSYLSELADSVPTAANVEYYARIVEEKSLLRRLIRTATSIAQDGYTREDEIDVLLDEAERKIMEVSQRKHSGAFKNIKDVLVQTYDNIEMLHNRNGDITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTN-----ENVAIF------SLEMSAQQLVMRMLCAEGNTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVSDIRAKCRRLKQESGLGMVVIDYLQLIQGSGRNRENRQQEVSEISRSLKALARELEVPVIALSQLSESGSIEQDADIVAFLYRDNIIEIIIAKQRNGPVGTVQLAFIKEY [Model]
374-401	2vyfB	21%	>target -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EFSDSEILVMMGENGTGKTTLIKLLAGA-------------------------------------------------------------------------------------------------------------------------------------------------------------- >2vyfB ERIPPQSIEAEQAVLGAVFLDPTALTLASERLIPEDFYRAAHQKIFHAMLRVADKGEPVDLVTVTAELAALEQLEEVGGVSYLSELADSVPTAANVEYYARIVEEKSLLRRLIRTATSIAQDGYTREDEIDVLLDEAERKIMEVSQRKAFKNIKDVLVQTYDNIEMLHNITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVSDIRAKCRRLKQESGLGMVVIDYRENRQQEVSEISRSLKALARELEVPVIALSQLSESGSIEQDADIVAFLIIEIIIAKQRNGPVG [Model]
464-526	2vyfA	13%	>target ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EVQHLSGGELQRVAIVLALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEH--------------------------------------------------------------------------------------- >2vyfA RIPPQSIEAEQAVLGAVFLDPTALTLASERLIPEDFYRAAHQKIFHAMLRVADKGEPVDLVTVTAELAALEQLEEVGGVSYLSELADSVPTAANVEYYARIVEEKSLLRRLIRTATSIAQDGYTREDEIDVLLDEAERKIMEVSQRKHSGAFKNIKDVLVQTYDNIEMLHNRNGDITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQLVMRMLCAEGNTGKLTPEDWGKLTMAMGSLSNAGIYIDDTP--SIRVSD---IRAKCRRLKQESGLGMVVIDYLQLIQGSGRNRENRQQEVSEISRSLKALARELEVPVIALSQLSESGSIEQDADIVAFLYRDNIIEIIIAKQRNGPVGTVQLAFIKEY [Model]
484-540	2vyfB	11%	>target ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IPADIYLIDEPSAYLD--SEQRIICSKVIRRFILHNKKTAFIVEH--DFIMATYLADKVIV---------------- >2vyfB ERIPPQSIEAEQAVLGAVFLDPTALTLASERLIPEDFYRAAHQKIFHAMLRVADKGEPVDLVTVTAELAALEQLEEVGGVSYLSELADSVPTAANVEYYARIVEEKSLLRRLIRTATSIAQDGYTREDEIDVLLDEAERKIMEVSQRKAFKNIKDVLVQTYDNIEMLHNITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVSDIRAKCRRLKQESGLGMVVID----YRENRQQEVSEISRSLKALARELEVPVIALSQLSESGSIEQDADIVAFLIIEIIIAKQRNGPVG [Model]

2vye: CRYSTAL STRUCTURE OF THE DNAC-SSDNA COMPLEX
Solved by: X-RAY, Resolution: 4.10A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

373-526	2vyeA	11%	>target ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GEFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIPKLNVSMKPQKIAPKFPGTVRQLFFKKI-----------RGQFLNPQFQTDV---VKPLRIDDIIDQEVQHLSGGELQRVAIVLALGIPADIYLIDEPS------AYLDS--EQRIICSKVIRRFILHNKKTAFIVEH---------------------------------------------------------------------- >2vyeA IPPQSIEAEQAVLGAVFLDPTALTLASERLIPEDFYRAAHQKIFHAMLRVADKGEPVDLVTVTAELAALEQLEEVGGVSYLSELADSVPTAANVEYYARIVEEKSLLRRLIRTATSIAQDGYTREDEIDVLLDEAERKIMEVSQRKHSGAFKNIKDVLVQTYDNIEMLHNRNGDITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTN-----ENVAIFS------LEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVSDIRAKCRRLKQESGLGMVVIDYLQLIQGSGRNRENRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDPMMSDLRESGSIEQDADIVAFLYRDDNKDSENKNIIEIIIAKQRNGVQLAFIKEYNKFVN [Model]
374-526	2vyeB	12%	>target ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EFSDSEILVMMGENGTGKTTLIKLLAGALKPDEGQDIPKLNVSMKPQKIAPKFPGTVRQLFFKKIRGQFLNPQFQTDVVKPLRIDDIIDQEVQHLSGGELQRVAIVLALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEH------------------------------------------------------------------------------ >2vyeB ERIPPQSIEAEQAVLGAVFLDPTALTLASERLIPEDFYRAAHQKIFHAMLRVADKGEPVDLVTVTAELAALEQLEEVGGVSYLSELADSVPTAANVEYYARIVEEKSLLRRLIRTATSIAQDGYTREDEIDVLLDEAERKIMEVSQRKHSGAFKDVLVQTYDNIEMLHNRNGDITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTN-----ENVAIF----S--LEMSAQQLVMRMLCA------------------------EGNLTPEDWGKLTMAMGSLSNAGIYIDDTP--SIRVSD---IRAKCRRLKQESGLGMVVIDYLQLIQGSGRNRENRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDKRDLRESGSIEQDADIVAFIIAKQRGT [Model]
466-526	2vyeA	13%	>target -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QHLSGGELQRVAIVLALGIPADIYLIDEPSAYLDSEQRIICSKVIRRFILHNKKTAFIVEH--------------------------------------------------------------------------------------------------------------- >2vyeA IPPQSIEAEQAVLGAVFLDPTALTLASERLIPEDFYRAAHQKIFHAMLRVADKGEPVDLVTVTAELAALEQLEEVGGVSYLSELADSVPTAANVEYYARIVEEKSLLRRLIRTATSIAQDGYTREDEIDVLLDEAERKIMEVSQRKHSGAFKNIKDVLVQTYDNIEMLHNRNGDITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQLVMRMLCAEGNINAQNLRTGKLTPEDWGKLTMAMGSLSNAGIYIDDTP--SIRVSD---IRAKCRRLKQESGLGMVVIDYLQLIQGSGRNRENRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDPMMSDLRESGSIEQDADIVAFLYRDDNKDSENKNIIEIIIAKQRNGVQLAFIKEYNKFVN [Model]
483-526	2vyeB	6%	>target ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GIPADIYLIDEPS------AYLDS--EQRIICSKVIRRFILHNKKTAFIVEH------------------------------------- >2vyeB ERIPPQSIEAEQAVLGAVFLDPTALTLASERLIPEDFYRAAHQKIFHAMLRVADKGEPVDLVTVTAELAALEQLEEVGGVSYLSELADSVPTAANVEYYARIVEEKSLLRRLIRTATSIAQDGYTREDEIDVLLDEAERKIMEVSQRKHSGAFKDVLVQTYDNIEMLHNRNGDITGIPTGFTELDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSAQQLVMRMLCAEGNLTPEDWGKLTMAMGSLSNAGIYIDDTPSIRVSDIRAKCRRLKQESGLGMVVIDYLQLIQGSGRNRENRQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDKRDLRESGSIEQDADIVAFIIAKQRGT [Model]

Downloads

download model.tgz

Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.