SWISS-MODEL Repository

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SWISS-MODEL Repository - Model Details

Model Overview

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152

Sequence

UniProt

Q07749

Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain

Link to: [ InterPro ]

Cofilin_ADF

Model 3D Structure

	Model information:
	Modelled residue range:	1 to 137
	Based on template:	[ 2l72 ]
	Sequence Identity [%]:	36%
	Model date:	2013-05-06
	Revision date:	2013-04-01

Quaternary structure information:	[details]
Template (2l72): MONOMER Model built: SINGLE CHAIN

Ligand information:	[details]
Ligands in the template: none. Ligands in the model: none.

Template Links: [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

Alignment


TARGET    1       MASGVKVD PSCKNAYDLL HNKHQHSYII FKIDKNDTAI VVEKVGEKNA
2l72A     1       masgmgvd encvarfnel kirktvkwiv fkie--ntki vvekdgkgna
                                                                      
TARGET                 sss  hhhhhhhhh hhh     ss ss     sss sss       
2l72A                  sss  hhhhhhhhh hhh     ss ssss   sss sss     hh


TARGET    49    PYAEFVEEMK KLVEDGKECR YAAVDVEVTV QRQGAEGTST LNKVIFVQYC
2l72A     47    ------defr galp-andcr fgvydcg--- ---------- -nkiqfvlwc
                                                                      
TARGET                  hh hh         sss  sssss        sss sss  sssss
2l72A                 hhhh hh         sss                        sssss


TARGET    99    PDNAPVRRRM LYASSVRALK ASLGLESLFQ VQASEMSDL  ---       
2l72A     76    pdnapvkprm tyasskdall kkldgatava leahemgdla pla       
                                                                      
TARGET                hhhh hhhhhhhhhh hh         sss                  
2l72A                 hhhh hhhhhhhhhh hh         sss

Quality

[ start new quality assessment in Workspace ]

Ligand Modelling Log

Template's ligands section 
Template without ligands. 
No ligands were included in the model.

Oligomer Modelling Log

Quaternary Structure Annotation of the Template 
 2l72 is annotated as MONOMER 
 The oligomeric state of the structure was assigned by the authors of the corresponding PDB entry 
 The following biological unit was used to build the template structure: 2l72.pdb1.gz 
      
 
Quaternary Structure Modelling of the Target Protein 
 Analysis of evolutionary and family specific aspects revealed non-conservation of the oligomeric structure 
 Hence, the oligomeric structures of the target and the template cannot be assumed to be similar (=MONOMER) 
 The target structure was calculated as SINGLE CHAIN 
 The corresponding reliability score is 0.136 (>0.5 indicates similarity)

Template Selection

 - Start SMR-Pipeline for:cc08abcfe8428ea673605d054d526985 on BC2-cluster at Mon May  6 06:44:16
2013 


 - Analyze BLAST summary ... 
 - No templates found with BLAST (seqid-cutoff: 60): go to HHSEARCH

 - Run HHSearch to detect more templates...
 - Generate new template library
 - Run template selection against modified template library 
 - Summarize templates: 
 - No template with A found
 - Proof template(s) selection compared to previous Repository update
 - Different number of templates selected (old0 vs new:1): model based on new templates
 - Send 1 Templates for modeling

 - @@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@@
 -  ************************************************************************
 - building model based on 2l72A (1-137) was successful 
 - Repository Pipeline parameter

   Cut-off parameters to model the target based on a BLAST target-template alignment
    Evalue :                                     0.0001
    Minimum Template size (aa) for ranking :     25
    Minimum Sequence identity :                  60

   Cut-off parameters to model the target based on a HHSearch target-template alignment
    Evalue :                                     0.0001
    Probability :                                50
    MAC :                                        0.3

   Parameters for model selection
    Minimal number of uncovered target
     residues after BLAST to run HHSEARCH :      50
    Minimal number of uncovered target
     residues to model an additional template :  25
    
 - Finish SMR-Pipeline for:cc08abcfe8428ea673605d054d526985 on BC2-cluster at Mon May  6 06:48:46
2013

Template Search

[ start new template identification in Workspace ]

Template Description

Match

Chain

SeqId

2l72: SOLUTION STRUCTURE AND DYNAMICS OF ADF FROM TOXOPLASMA GON
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1-141

2l72A

35%

1f7s: CRYSTAL STRUCTURE OF ADF1 FROM ARABIDOPSIS THALIANA
Solved by: X-RAY, Resolution: 2.00A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

2-136

1f7sA

33%

2i2q: FISSION YEAST COFILIN
Solved by: X-RAY, Resolution: 1.72A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

3-135

2i2qA

32%

1ahq: RECOMBINANT ACTOPHORIN
Solved by: X-RAY, Resolution: 2.30A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

4-147

1ahqA

31%

1cnu: PHOSPHORYLATED ACTOPHORIN FROM ACANTAMOEBA POLYPHAGA
Solved by: X-RAY, Resolution: 2.30A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

4-147

1cnuA

31%

2lj8: SOLUTION STRUCTURE OF ADF/COFILIN FROM TRYPANOSOMA BRUCEI
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1-150

2lj8A

30%

1qpv: YEAST COFILIN
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

5-147

1qpvA

28%

1cfy: YEAST COFILIN, MONOCLINIC CRYSTAL FORM
Solved by: X-RAY, Resolution: 3.00A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	5-147	1cfyA	28%	>target VKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLESLFQVQASEMSDLDEKSVKSDLM- >1cfyA VAVADESLTAFNDLKLGKKYKFILFGLNDAKTEIVVKETS-TDPSYDAFLEKLPE-----NDCLYAIYDFEYEINGN----EGKRSKIVFFTWSPDTAPVRSKMVYASSKDALRRALNGVS-TDVQGTDFSEVSYDSVLERVSR [Model]
	5-147	1cfyB	28%	>target VKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLESLFQVQASEMSDLDEKSVKSDLM- >1cfyB VAVADESLTAFNDLKLGKKYKFILFGLNDAKTEIVVKETS-TDPSYDAFLEKLPE-----NDCLYAIYDFEYEINGN----EGKRSKIVFFTWSPDTAPVRSKMVYASSKDALRRALNGVS-TDVQGTDFSEVSYDSVLERVSR [Model]

2kvk: SOLUTION STRUCTURE OF ADF/COFILIN (LDCOF) FROM LEISHMANIA
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1-152

2kvkA

27%

1cof: YEAST COFILIN, ORTHORHOMBIC CRYSTAL FORM
Solved by: X-RAY, Resolution: 2.30A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

5-150

1cofA

27%

1ak6: DESTRIN, NMR, MINIMIZED AVERAGE STRUCTURE
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1-151

1ak6A

22%

1ak7: DESTRIN, NMR, 20 STRUCTURES
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1-151

1ak7A

22%

1q8x: NMR STRUCTURE OF HUMAN COFILIN
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1-151

1q8xA

21%

3j0s: REMODELING OF ACTIN FILAMENTS BY ADF COFILIN PROTEINS
Solved by: X-RAY, Resolution: 9.00A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1-151	3j0sW	21%	>target MASGVKVDPSCKNAYDLLHNK---------HQHSYIIFKIDKNDTAIVVEKVGE---------KNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLESLFQVQASEMSDLDEKSV-KSDLMSNQR--------- >3j0sW MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDDPYATFVKMLPD-----KDCRYALYDATYETKES------KKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKLTGIK-HELQANCYEEVKDRCTLAEKL-GGSAVISLEGKPL [Model]
1-151	3j0sS	21%	>target MASGVKVDPSCKNAYDLLHNK---------HQHSYIIFKIDKNDTAIVVEKVGE---------KNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLESLFQVQASEMSDLDEKSV-KSDLMSNQR--------- >3j0sS MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDDPYATFVKMLPD-----KDCRYALYDATYETKES------KKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKLTGIK-HELQANCYEEVKDRCTLAEKL-GGSAVISLEGKPL [Model]
1-151	3j0sO	21%	>target MASGVKVDPSCKNAYDLLHNK---------HQHSYIIFKIDKNDTAIVVEKVGE---------KNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLESLFQVQASEMSDLDEKSV-KSDLMSNQR--------- >3j0sO MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDDPYATFVKMLPD-----KDCRYALYDATYETKES------KKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKLTGIK-HELQANCYEEVKDRCTLAEKL-GGSAVISLEGKPL [Model]
1-151	3j0sV	21%	>target MASGVKVDPSCKNAYDLLHNK---------HQHSYIIFKIDKNDTAIVVEKVGE---------KNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLESLFQVQASEMSDLDEKSV-KSDLMSNQR--------- >3j0sV MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDDPYATFVKMLPD-----KDCRYALYDATYETKES------KKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKLTGIK-HELQANCYEEVKDRCTLAEKL-GGSAVISLEGKPL [Model]
1-151	3j0sR	21%	>target MASGVKVDPSCKNAYDLLHNK---------HQHSYIIFKIDKNDTAIVVEKVGE---------KNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLESLFQVQASEMSDLDEKSV-KSDLMSNQR--------- >3j0sR MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDDPYATFVKMLPD-----KDCRYALYDATYETKES------KKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKLTGIK-HELQANCYEEVKDRCTLAEKL-GGSAVISLEGKPL [Model]
1-151	3j0sN	21%	>target MASGVKVDPSCKNAYDLLHNK---------HQHSYIIFKIDKNDTAIVVEKVGE---------KNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLESLFQVQASEMSDLDEKSV-KSDLMSNQR--------- >3j0sN MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDDPYATFVKMLPD-----KDCRYALYDATYETKES------KKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKLTGIK-HELQANCYEEVKDRCTLAEKL-GGSAVISLEGKPL [Model]
1-151	3j0sU	21%	>target MASGVKVDPSCKNAYDLLHNK---------HQHSYIIFKIDKNDTAIVVEKVGE---------KNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLESLFQVQASEMSDLDEKSV-KSDLMSNQR--------- >3j0sU MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDDPYATFVKMLPD-----KDCRYALYDATYETKES------KKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKLTGIK-HELQANCYEEVKDRCTLAEKL-GGSAVISLEGKPL [Model]
1-151	3j0sQ	21%	>target MASGVKVDPSCKNAYDLLHNK---------HQHSYIIFKIDKNDTAIVVEKVGE---------KNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLESLFQVQASEMSDLDEKSV-KSDLMSNQR--------- >3j0sQ MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDDPYATFVKMLPD-----KDCRYALYDATYETKES------KKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKLTGIK-HELQANCYEEVKDRCTLAEKL-GGSAVISLEGKPL [Model]
1-151	3j0sX	21%	>target MASGVKVDPSCKNAYDLLHNK---------HQHSYIIFKIDKNDTAIVVEKVGE---------KNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLESLFQVQASEMSDLDEKSV-KSDLMSNQR--------- >3j0sX MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDDPYATFVKMLPD-----KDCRYALYDATYETKES------KKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKLTGIK-HELQANCYEEVKDRCTLAEKL-GGSAVISLEGKPL [Model]
1-151	3j0sM	21%	>target MASGVKVDPSCKNAYDLLHNK---------HQHSYIIFKIDKNDTAIVVEKVGE---------KNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLESLFQVQASEMSDLDEKSV-KSDLMSNQR--------- >3j0sM MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDDPYATFVKMLPD-----KDCRYALYDATYETKES------KKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKLTGIK-HELQANCYEEVKDRCTLAEKL-GGSAVISLEGKPL [Model]
1-151	3j0sT	21%	>target MASGVKVDPSCKNAYDLLHNK---------HQHSYIIFKIDKNDTAIVVEKVGE---------KNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLESLFQVQASEMSDLDEKSV-KSDLMSNQR--------- >3j0sT MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDDPYATFVKMLPD-----KDCRYALYDATYETKES------KKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKLTGIK-HELQANCYEEVKDRCTLAEKL-GGSAVISLEGKPL [Model]
1-151	3j0sP	21%	>target MASGVKVDPSCKNAYDLLHNK---------HQHSYIIFKIDKNDTAIVVEKVGE---------KNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLESLFQVQASEMSDLDEKSV-KSDLMSNQR--------- >3j0sP MASGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDVGQTVDDPYATFVKMLPD-----KDCRYALYDATYETKES------KKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKLTGIK-HELQANCYEEVKDRCTLAEKL-GGSAVISLEGKPL [Model]

1q8g: NMR STRUCTURE OF HUMAN COFILIN
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1-151

1q8gA

21%

3q2b: CRYSTAL STRUCTURE OF AN ACTIN DEPOLYMERIZING FACTOR
Solved by: X-RAY, Resolution: 1.60A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

3-136

3q2bA

21%

2xf1: CRYSTAL STRUCTURE OF PLASMODIUM FALCIPARUM ACTIN DEPOLYMERIZATION FACTOR 1
Solved by: X-RAY, Resolution: 1.96A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1-136

2xf1A

21%

1tvj: SOLUTION STRUCTURE OF CHICK COFILIN
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1-151

1tvjA

20%

2xfa: CRYSTAL STRUCTURE OF PLASMODIUM BERGHEI ACTIN DEPOLYMERIZATION FACTOR 2
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	1-148	2xfaA	20%	>target MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGE-KNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLESLFQVQAS-EMSDLDEKSVKSDLMS- >2xfaA MVSGVNVSDECIYEFNRLKVKHLNKYIIYKIENLEKIVVDVLEHDMELTSLDNIIMRIKNNLKN-TECRYIIADMPIPTPEGV-----LRDRIYFIFWSPGLSKPKEKMLYAASKESLVRKINGIF-KSLEITCDINEFE-EELKAIILNT [Model]
	1-148	2xfaB	20%	>target MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGE-KNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLESLFQVQAS-EMSDLDEKSVKSDLMS- >2xfaB MVSGVNVSDECIYEFNRLKVKHLNKYIIYKIENLEKIVVDVLEHDMELTSLDNIIMRIKNNLKN-TECRYIIADMPIPTPEGV-----LRDRIYFIFWSPGLSKPKEKMLYAASKESLVRKINGIF-KSLEITCDINEFE-EELKAIILNT [Model]

1t3x: THREE CRYSTAL STRUCTURES OF HUMAN COACTOSIN-LIKE PROTEIN
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

5-147

1t3xA

19%

1wfs: SOLUTION STRUCTURE OF GLIA MATURATION FACTOR-GAMMA FROM MUMUSCULUS
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1-149

1wfsA

19%

1vkk: CRYSTAL STRUCTURE OF GLIA MATURATION FACTOR-GAMMA (GMFG) FROM MUS MUSCULUS AT 1.50 A RESOLUTION
Solved by: X-RAY, Resolution: 1.35A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

5-148

1vkkA

19%

1x67: SOLUTION STRUCTURE OF THE COFILIN HOMOLOGY DOMAIN OF HIP-5(DREBRIN-LIKE PROTEIN)
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

3-150

1x67A

19%

1t2l: THREE CRYSTAL STRUCTURES OF HUMAN COACTOSIN-LIKE PROTEIN
Solved by: X-RAY, Resolution: 2.80A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	5-150	1t2lA	18%	>target -VKVD-PSCKNAYDLLHNKH-QHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLESLFQVQASEMSDLDEKSVKSDLMSNQ---- >1t2lA ATKIDKEACRAAYNLVRDDGSAVIWVTFKYDG--STIVPGE---QGAEYQHFIQQCTD-----DVRLFAFVRFTTG------DAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQNFA-KEFVISDRKELEEDFIKSELKKAGGANY [Model]
	5-147	1t2lB	19%	>target -VKVD-PSCKNAYDLLHNKH-QHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLESLFQVQASEMSDLDEKSVKSDLM- >1t2lB ATKIDKEACRAAYNLVRDDGSAVIWVTFKYDG--STIVPGE---QGAEYQHFIQQCTD-----DVRLFAFVRFTTG------DAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQNFA-KEFVISDRKELEEDFIKSELKK [Model]

1wnj: NMR STRUCTURE OF HUMAN COACTOSIN-LIKE PROTEIN
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1-149

1wnjA

18%

2w0i: STRUCTURE OF C-TERMINAL ACTIN DEPOLYMERIZING FACTOR HOMOLOGY (ADF-H) DOMAIN OF HUMAN TWINFILIN-2
Solved by: X-RAY, Resolution: 1.8A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

5-147

2w0iA

18%

1t3y: THREE CRYSTAL STRUCTURES OF HUMAN COACTOSIN-LIKE PROTEIN
Solved by: X-RAY, Resolution: 1.15A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

5-148

1t3yA

18%

2hd7: SOLUTION STRUCTURE OF C-TEMINAL DOMAIN OF TWINFILIN-1.
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

2-150

2hd7A

18%

1vfq: THE CRYSTAL STRUCTURE OF HUMAN COACTOSIN-LIKE PROTEIN AT 1.9 A RESOLUTION
Solved by: X-RAY, Resolution: 1.90A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1-147

1vfqA

18%

3l50: THE CRYSTAL STRUCTURE OF HUMAN GLIA MATURATION FACTOR, GAM(GMFG)
Solved by: X-RAY, Resolution: 1.90A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	5-146	3l50A	18%	>target ---VKVDPSCKNAYDLLHNK--HQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLESLFQVQASEMSDLDEKSVKSDL-- >3l50A SMVCEVDPELTEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQ-NISPEELKMELPE-----RQPRFVVYSYKYVHDDG-----RVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTK--VFEIRTTDDLTEAWLQEKLSF [Model]
	5-146	3l50B	18%	>target ---VKVDPSCKNAYDLLHNK--HQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLESLFQVQASEMSDLDEKSVKSDL-- >3l50B SMVCEVDPELTEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQ-NISPEELKMELPE-----RQPRFVVYSYKYVHDDG-----RVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTK--VFEIRTTDDLTEAWLQEKLSF [Model]

1tmw: SOLUTION STRUCTURE OF HUMAN COACTOSIN LIKE PROTEIN D123N
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

5-149

1tmwA

18%

3daw: STRUCTURE OF THE ACTIN-DEPOLYMERIZING FACTOR HOMOLOGY DOMAIN IN COMPLEX WITH ACTIN
Solved by: X-RAY, Resolution: 2.55A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

4-149

3dawB

17%

2d8b: SOLUTION STRUCTURE OF THE SECOND TANDEM COFILIN-DOMAIN OF MOUSE TWINFILIN
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

3-151

2d8bA

17%

1hqz: COFILIN HOMOLOGY DOMAIN OF A YEAST ACTIN-BINDING PROTEIN ABP1P
Solved by: X-RAY, Resolution: 2.10A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

6-150	1hqz1	17%	>target -------KVDPSCKNAYDLLHNKH--QHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALK-ASLGLESLFQVQASEMSDLDEKSVKSDLMSNQ-- >1hqz1 LEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAK-KEYEPESTG---SSFHDFLQLFDE-----TKVQYGLARVSPP--------GSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYH-VQVTARDEDDLDENELLMKISNAAGA [Model]
6-150	1hqz2	17%	>target -------KVDPSCKNAYDLLHNKH--QHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALK-ASLGLESLFQVQASEMSDLDEKSVKSDLMSNQ-- >1hqz2 LEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAK-KEYEPESTG---SSFHDFLQLFDE-----TKVQYGLARVSPP--------GSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYH-VQVTARDEDDLDENELLMKISNAAGA [Model]
7-148	1hqz3	17%	>target --------VDPSCKNAYDLLHNKH--QHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKA-SLGLESLFQVQASEMSDLDEKSVKSDLMS >1hqz3 LEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKK-EYEPESTG---SSFHDFLQLFDE-----TKVQYGLARVSP--------PGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYH-VQVTARDEDDLDENELLMKISN [Model]
7-148	1hqz4	17%	>target ---------VDPSCKNAYDLLHNKH--QHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALK-ASLGLESLFQVQASEMSDLDEKSVKSDLMS- >1hqz4 ALEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKK-EYEPESTG---SSFHDFLQLFDE-----TKVQYGLARVSP--------PGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYH-VQVTARDEDDLDENELLMKISNA [Model]
7-148	1hqz5	17%	>target --------VDPSCKNAYDLLHNKH--QHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALK-ASLGLESLFQVQASEMSDLDEKSVKSDLMS- >1hqz5 LEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKK-EYEPESTG---SSFHDFLQLFDE-----TKVQYGLARVSP--------PGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYH-VQVTARDEDDLDENELLMKISNA [Model]
7-148	1hqz6	17%	>target ---------VDPSCKNAYDLLHNKH--QHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALK-ASLGLESLFQVQASEMSDLDEKSVKSDLMS- >1hqz6 ALEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKK-EYEPESTG---SSFHDFLQLFDE-----TKVQYGLARVSP--------PGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYH-VQVTARDEDDLDENELLMKISNA [Model]
7-146	1hqz7	17%	>target ---------VDPSCKNAYDLLHNKH--QHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALK-ASLGLESLFQVQASEMSDLDEKSVKSDL >1hqz7 ALEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKK-EYEPESTG---SSFHDFLQLFDE-----TKVQYGLARVSP--------PGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYH-VQVTARDEDDLDENELLMKI [Model]
7-147	1hqz8	17%	>target ------VDPSCKNAYDLLH-NKH-QHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALK-ASLGLESLFQVQASEMSDLDEKSVKSDLM >1hqz8 PIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKK-EYEPESTG---SSFHDFLQLFDE-----TKVQYGLARVSP--------PGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYH-VQVTARDEDDLDENELLMKIS [Model]
7-148	1hqz9	17%	>target ---------VDPSCKNAYDLLHNKH--QHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALK-ASLGLESLFQVQASEMSDLDEKSVKSDLMS- >1hqz9 ALEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKK-EYEPESTG---SSFHDFLQLFDE-----TKVQYGLARVSP--------PGSDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYH-VQVTARDEDDLDENELLMKISNA [Model]

1m4j: CRYSTAL STRUCTURE OF THE N-TERMINAL ADF-H DOMAIN OF MOUSE TWINFILIN ISOFORM-1
Solved by: X-RAY, Resolution: 1.60A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

	5-147	1m4jA	17%	>target VKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLESL-FQVQASEMSDLDEKSVKSDLM >1m4jA IQASEDVKEIFARAR---NGKYRLLKISIENEQLVVGSCSPPSDSWEQDYDSFVLPLLEDKQPCYVLFRLDSQN--------AQGYEWIFIAWSPDHSHVRQKMLYAATRATLKKEFGGGHIKDEVFGTVKEDVSLHGYKKYLL [Model]
	5-147	1m4jB	17%	>target VKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLESL-FQVQASEMSDLDEKSVKSDLM >1m4jB IQASEDVKEIFARAR---NGKYRLLKISIENEQLVVGSCSPPSDSWEQDYDSFVLPLLEDKQPCYVLFRLDSQN--------AQGYEWIFIAWSPDHSHVRQKMLYAATRATLKKEFGGGHIKDEVFGTVKEDVSLHGYKKYLL [Model]

1wm4: SOLUTION STRUCTURE OF MOUSE COACTOSIN, AN ACTIN FILAMENT BINDING PROTEIN
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1-149

1wm4A

16%

1v6f: SOLUTION STRUCTURE OF GLIA MATURATION FACTOR-BETA FROM MUSMUSCULUS
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1-150

1v6fA

16%

2vac: STRUCTURE OF N-TERMINAL ACTIN DEPOLYMERIZING FACTOR HOMOLOGY (ADF-H) DOMAIN OF HUMAN TWINFILIN-2
Solved by: X-RAY, Resolution: 1.7A, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

2-144

2vacA

16%

1udm: SOLUTION STRUCTURE OF COACTOSIN-LIKE PROTEIN (COFILIN FAMILY) FROM MUS MUSCULUS
Solved by: NMR, Identified by HHSEARCH
[ SMTL ] [ RCSB ] [ PDBe ] [ SCOP ] [ CATH ]

1-149

1udmA

16%

Downloads

download model.tgz

Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.