SWISS-MODEL Repository - Model Details

Model Overview
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1
636

Sequence
UniProt Q183T0
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

STRING
Q183T0: 272563.CD2849

Domain
Link to: [ InterPro ]
Aminotran_5
HAD_2

Model 3D Structure
Model information:
Modelled residue range: 8 to 263
Based on template: [ 1fez ]  
Sequence Identity [%]: 64%
Model date: 2008-08-31
Revision date: 2008-08-31

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-08-31. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    8       KIKAVVFD WAGTTVDYGC FAPLNVFIEI FKRRGIDVTM EEARKPMGKL
1fezA     5       kieavifd wagttvdygc faplevfmei fhkrgvaita eearkpmgll
                                                                      
TARGET              ssssss              hhhhhhhh hh                   
1fezA               ssssss              hhhhhhhh hh                   


TARGET    56    KIDHIREMCE MDRIKNIWSD KFGKVPTEDD VNELYAEFEP MLFETLEEYT
1fezA     53    kidhvralte mpriasewnr vfrqlptead iqemyeefee ilfailprya
                                                                      
TARGET          hhhhhhhh    hhhhhhhhh hh     hhh hhhhh   hh hhh       
1fezA           h   hhhh    hhhhhhhhh hh     hhh hhhhh   hh hhhh      


TARGET    106   TPIPHVVETI EKLRKNGLKI GSTTGYTREM MNIVEPNAAK KGYSPDFLVT
1fezA     103   spinavkevi aslrergiki gsttgytrem mdivakeaal qgykpdflvt
                                                                      
TARGET               hhhhh hhhhhh  ss s      hhh hhhhhhhhhh           
1fezA                hhhhh hhhhhh  ss s      hhh hhhhhhhhhh           


TARGET    156   PSEVSQGRPY PWMCYKNAEA LGVSPMSSMV KVGDTISDVK EGVNAGMWSV
1fezA     153   pddvpagrpy pwmcykname lgvypmnhmi kvgdtvsdmk egrnagmwtv
                                                                      
TARGET                      hhhhhhhhh h      sss sss  hhhhh hhhhh  sss
1fezA                       hhhhhhhhh h      sss sss  hhhhh hhhhh  sss


TARGET    206   AVIKGSSELG LTQEEVENMD KEELKAKMSI VSKKFKEAGA HFVIETMAEL
1fezA     203   gvilgsselg lteeevenmd svelrekiev vrnrfvenga hftietmqel
                                                                      
TARGET          sss                   hhhhhhhhhh hhhhhhhh    sss   hhh
1fezA           sss                   hhhhhhhhhh hhhhhhhh    sss   hhh


TARGET    256   EDILIKIE                                              
1fezA     253   esvmehie-                                             
                                                                      
TARGET          hhhhhh                                                
1fezA           hhhhhh

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: 63e880c5dd95633ea74feacc2e824785 on BC2-cluster at Sun Aug 31 02:55:23 2008 
BLAST_TEMPLATE SELECTION SUCCESSFUL TEMPLATES FOUND:  1 BUT STILL ROOM FOR IMPROVEMENT GO TO
HHSEARCH


############# TEMPLATES SELECTED #############

>63e880c5dd95633ea74feacc2e824785
********************************************************************************
>1fezA Evalue:1.95017e-96 SeqID:64.844 Method:BLAST Type:MODEL
-********************************-----------------------------------------------
>1m32A Evalue:2.2E-44 SeqID:51.801 Method:HHSEARCH Type:MODEL
----------------------------------**********************************************


TEMPLATE ID    START          STOP           METHOD         STATUS         
1fezA          8              263            BLAST          BUILT          
1m32A          277            634            HHSEARCH       BUILT          

FINISHED PIPELINE ON ID: 63e880c5dd95633ea74feacc2e824785 on gopt-45.cluster.bc2.ch BC2-Cluster at
Sun Aug 31 03:03:10 2008


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.