SWISS-MODEL Repository - Model Details

Model Overview
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1
692

Sequence
UniProt Q2PS20
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
MORN
MORN
MORN
MORN
MORN
MORN
MORN
MORN

Model 3D Structure
Model information:
Modelled residue range: 8 to 140
Based on template: [ 1h3i ]  
Sequence Identity [%]: 21%
Model date: 2008-08-30
Revision date: 2008-08-30

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-08-30. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    8        FDDGGAY CGGWEGGKAH GHGLCTGPKG QGEYSGSWNF GFEVAGVYTW
1h3iA     52    f--ffdgstl egyyvddalq gq-------- ---------- -----gvyty
                                                                      
TARGET                       sss  sss sss hhhhhh h               sssss
1h3iA                      sssss  sss ss                         sssss


TARGET    55    PSGNTFEGYW SQGKRHGLGI ETK--GRWLY KGEWTHGFKG RYGIRQSTNS
1h3iA     77    edggvlqgty vdgelngpaq eydtdgrlif kgqykdnirh gvcwiyyp-d
                                                                      
TARGET             sssssss s  sssssss ss      ss ssssss sss sssssss   
1h3iA              sssssss s  sssssss sss   ssss ssssss sss sssssss   


TARGET    103   GAKYEGTWN- NGLQDGYGTE -TYADGG-TY QGQFTNG-MR HG -------
1h3iA     126   ggslvgevne dgemtgekia yvypdertal ygkfidgemi egklatlmst
                                                                      
TARGET           sssssss                         sss        ss        
1h3iA            sssssss      sss  ss sss   ssss ssssss sss ssssssss  


TARGET          ---------- ---------- ---------- ---------- ----------
1h3iA     176   eegrphfelm pgnsvyhfdk stsscistna llpdpyeser vyvaesliss
                                                                      
TARGET                                                                
1h3iA                sssss    sss                    hhhh s ssssss    


TARGET          ---------- ---------- ---------- ---------- ----------
1h3iA     226   ageglfskva vgpntvmsfy ngvrithqev dsrdwalngn tlsldeetvi
                                                                      
TARGET                                                                
1h3iA            sssssss       ssssss   sss hhhh hh       s ssss   sss


TARGET          ---------- ---------- ---------- ---------- ----------
1h3iA     276   dvpepynhvs kycaslghka nhsftpnciy dmfvhprfgp ikcirtlrav
                                                                      
TARGET                                                                
1h3iA           ss hhh                sss   ssss sssss   ss sssssss   


TARGET          ---------- ---------                                  
1h3iA     326   eadeeltvay gydhsppgk                                  
                                                                      
TARGET                                                                
1h3iA              sss sss

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: f49985e591c62990a3976f5582a05344 on BC2-cluster at Sat Aug 30 13:43:03 2008 
NO HITS FOUND IN BLAST-SEARCH FOR SEQID-CUTOFF 60 GO TO HHSEARCH


############# TEMPLATES SELECTED #############

>f49985e591c62990a3976f5582a05344
*****************************************************************************
>1h3iA Evalue:1.9E-14 SeqID:21.583 Method:HHSEARCH Type:MODEL
-**--***********-------------------------------------------------------------


TEMPLATE ID    START          STOP           METHOD         STATUS         
1h3iA          8              140            HHSEARCH       BUILT          

FINISHED PIPELINE ON ID: f49985e591c62990a3976f5582a05344 on gopt-46.cluster.bc2.ch BC2-Cluster at
Sat Aug 30 13:50:25 2008


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.