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1
157

Sequence
UniProt Q55535
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
LMWPc

Model 3D Structure
Model information:
Modelled residue range: 1 to 155
Based on template: [ 2gi4 ]  
Sequence Identity [%]: 33%
Model date: 2008-09-03
Revision date: 2008-09-03

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-09-03. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    1        MKLLFVC LGNICRSPAA ENIMNAQIDQ AGLGAKIVCD SAGTSSYHVG
2gi4A     1     m--kkilfic lgnicrspma efimkdlvkk anlekeffin sagtsgehdg
                                                                      
TARGET             sssssss       hhhh hhhhhhhhh         sss ss        
2gi4A              sssssss       hhhh hhhhhhhhh         sss ss        


TARGET    48    DSPDRRMTES LKKRGYRVQG -RARQFFPED FAEFDLILAM DGDNYRNILA
2gi4A     49    egmhygtknk laqlniehkn ftskkltqkl cdesdflitm dnsnfknvlk
                                                                      
TARGET              hhhhhh hh                hhh hh   sss     hhhhhhhh
2gi4A               hhhhhh hh                hhh hh   sss     hhhhhh  


TARGET    97    QDPAGQYHHK VKMICDYTEK FGDREVPDPY YGGQAGFEHV IDLLEDACGN
2gi4A     99    nft--ntqnk vlkitdfsps lnydevpdpw ysg--nfdet ykilslackn
                                                                      
TARGET          h      hh      hhh                      hhh hhhhhhhhhh
2gi4A                          hhh                      hhh hhhhhhhhhh


TARGET    147   LLTSLGKEL  --                                         
2gi4A     145   llvflskhhh hh                                         
                                                                      
TARGET          hhhhh                                                 
2gi4A           hhhhh

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: 4511df656dd9e65afceb84874353ce55 on BC2-cluster at Wed Sep  3 15:08:34 2008 
NO HITS FOUND IN BLAST-SEARCH FOR SEQID-CUTOFF 60 GO TO HHSEARCH


############# TEMPLATES SELECTED #############

>4511df656dd9e65afceb84874353ce55
*******************************************************************************
>2gi4A Evalue:3.8E-41 SeqID:33.974 Method:HHSEARCH Type:MODEL
******************************************************************************-


TEMPLATE ID    START          STOP           METHOD         STATUS         
2gi4A          1              155            HHSEARCH       BUILT          

FINISHED PIPELINE ON ID: 4511df656dd9e65afceb84874353ce55 on gopt-75.cluster.bc2.ch BC2-Cluster at
Wed Sep  3 15:09:59 2008


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
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