SWISS-MODEL Repository - Model Details

Model Overview
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1
212

Sequence
UniProt Q5UPL9
Database: TrEMBL (Unreviewed) automatically annotated and not reviewed

Domain
Link to: [ InterPro ]
Acetyltransf_2

Model 3D Structure
Model information:
Modelled residue range: 3 to 122
Based on template: [ 2bsz ]  
Sequence Identity [%]: 26%
Model date: 2008-09-03
Revision date: 2008-09-03

Quaternary structure information: [details]
NA

Ligand information: [details]
NA
Template Links: [ RCSB ]   [ PDBe ]   [ SCOP ]  [ CATH ]  
display model: in [ AstexViewer ]
download model: as [ pdb ] - as [ Deepview project ]

This model has not been updated since 2008-09-03. In the meantime, new template structures may have become available which would allow building a more reliable model. Would you like to submit the target protein to SWISS-MODEL Workspace and build a new model now? [ Submit ]



Alignment 

TARGET    3                            NLSSLKKLM VGFLSRHNFS NRDYFSGETY
2bszA     6     pfdldaylar igytgprna- -sldtlkalh fahpqaipfe nidpflgrpv
                                                                      
TARGET                                  hhhhhhhh hhhhhh      hhhhh    
2bszA              hhhhhhh h            hhhhhhhh hh   h      hhhhh    


TARGET    32    LRTFDHYTII DKVYTT-KYG ICMELNYVFH IILTNHHIPN YLVKCHK-KK
2bszA     54    --rldlaalq dkivlggrgg ycfehnllfm halkalgfev gglaarvlwg
                                                                      
TARGET               hhhhh h             hhhhhhh hhhhhh  ss sssss     
2bszA                hhhhh hhhhhh      hhhhhhhhh hhhhhh  ss ssssssss  


TARGET    80    SNGD-FYDLF HLAIIVELDG SKYFIDVGFG EH-FIEPVEL NHNSI ----
2bszA     102   qsedaitars hmllrveldg rtyiadvgfg gltltaplll epgreqktph
                                                                      
TARGET                     ssssssss   sssss             sss           
2bszA                      ssssssss   sssss             sss           


TARGET          ---------- ---------- ---------- ---------- ----------
2bszA     152   epfriveadd hfrlqaaigg dwrslyrfdl qpqyevdysv tnyflstspt
                                                                      
TARGET                                                                
2bszA            sssssss   ssssssss   ssssssss       hhhhhh hhhhhh    


TARGET          ---------- ---------- ---------- ---------- ----------
2bszA     202   shflssviaa raapdrryal rgnrlsihhl teqteiataa dladtlqgll
                                                                      
TARGET                                                                
2bszA             hh  ssss sss ssssss ssssssssss  sssss  hh hhhhhhhhh 


TARGET          ---------- ---------- -                               
2bszA     255   giiipdrtaf eakvretkiv e                               
                                                                      
TARGET                                                                
2bszA                 hhhh hhhhhhh

Quality


no data available!

no data available!
Template Selection 
START PIPELINE ON ID: 407c3c179de452037eff5f895daa3358 on BC2-cluster at Wed Sep  3 20:30:33 2008 
NO HITS FOUND IN BLAST-SEARCH FOR SEQID-CUTOFF 60 GO TO HHSEARCH


############# TEMPLATES SELECTED #############

>407c3c179de452037eff5f895daa3358
***********************************************************************
>2bszA Evalue:9.5E-12 SeqID:26.613 Method:HHSEARCH Type:MODEL
-*********-******************************------------------------------


TEMPLATE ID    START          STOP           METHOD         STATUS         
2bszA          3              122            HHSEARCH       BUILT          

FINISHED PIPELINE ON ID: 407c3c179de452037eff5f895daa3358 on gopt-24.cluster.bc2.ch BC2-Cluster at
Wed Sep  3 20:33:03 2008


Template Description
Match Chain SeqId

Downloads
Reference

If you are using models from the SWISS-MODEL Repository, please cite the following articles:

- Kiefer F, Arnold K, Künzli M, Bordoli L, Schwede T (2009).
The SWISS-MODEL Repository and associated resources.
Nucleic Acids Res. 37, D387-D392.

- Jürgen Kopp and Torsten Schwede (2004)
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models.
Nucleic Acids Res. 32, D230-D234.
SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.